Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_M21
         (871 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99278-2|CAB16491.1|  277|Caenorhabditis elegans Hypothetical pr...    67   1e-11
Z50874-12|CAA90774.2| 1570|Caenorhabditis elegans Hypothetical p...    29   5.7  
AL024499-10|CAA19710.2| 1570|Caenorhabditis elegans Hypothetical...    29   5.7  
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr...    28   10.0 
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr...    28   10.0 
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p...    28   10.0 
AC006722-6|AAK68411.2|  488|Caenorhabditis elegans Hypothetical ...    28   10.0 
AC006645-11|AAF39850.1|  472|Caenorhabditis elegans Hypothetical...    28   10.0 

>Z99278-2|CAB16491.1|  277|Caenorhabditis elegans Hypothetical
           protein Y53C12B.2 protein.
          Length = 277

 Score = 67.3 bits (157), Expect = 1e-11
 Identities = 30/44 (68%), Positives = 36/44 (81%)
 Frame = +1

Query: 370 RKVAVPAHRYTPLKESWLKIFTPIVEHLLLQVRFNTKTRNVEIK 501
           R V VP HRYTPLK++W+ IFTPIV++L LQVRFN K R VEI+
Sbjct: 100 RVVPVPKHRYTPLKDNWVNIFTPIVKNLGLQVRFNLKKRQVEIR 143



 Score = 59.7 bits (138), Expect = 3e-09
 Identities = 28/49 (57%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
 Frame = +2

Query: 548 FCKGFHIWFEVDDALTLLRLNDLFVESFEVKDVK-TLNGDHLSXAIGRL 691
           F + F + FEV+DA+ L+RL+ LF+E+FEV DVK +L GDH+S AIGR+
Sbjct: 160 FVRAFILGFEVNDAIALIRLDHLFLETFEVADVKHSLKGDHVSRAIGRI 208


>Z50874-12|CAA90774.2| 1570|Caenorhabditis elegans Hypothetical
            protein H38K22.1 protein.
          Length = 1570

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 205  KTMKLKNIKRKATDDTGDGMEVEEPTI 285
            KT K K+   K +DD GD M+V+ P +
Sbjct: 1307 KTTKRKSGGSKISDDEGDSMDVKSPAV 1333


>AL024499-10|CAA19710.2| 1570|Caenorhabditis elegans Hypothetical
            protein H38K22.1 protein.
          Length = 1570

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 205  KTMKLKNIKRKATDDTGDGMEVEEPTI 285
            KT K K+   K +DD GD M+V+ P +
Sbjct: 1307 KTTKRKSGGSKISDDEGDSMDVKSPAV 1333


>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein
            F25F2.2 protein.
          Length = 4307

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -2

Query: 288  PNCGLFNLHTISGVICSFALYIFKL-HR 208
            PNC  F +HT+SG +   A ++ KL HR
Sbjct: 1624 PNCTFFEVHTLSGAV-HLATWLTKLKHR 1650


>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein
            F25F2.2 protein.
          Length = 4307

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -2

Query: 288  PNCGLFNLHTISGVICSFALYIFKL-HR 208
            PNC  F +HT+SG +   A ++ KL HR
Sbjct: 1624 PNCTFFEVHTLSGAV-HLATWLTKLKHR 1650


>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
            protein F25F2.2 protein.
          Length = 4307

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -2

Query: 288  PNCGLFNLHTISGVICSFALYIFKL-HR 208
            PNC  F +HT+SG +   A ++ KL HR
Sbjct: 1624 PNCTFFEVHTLSGAV-HLATWLTKLKHR 1650


>AC006722-6|AAK68411.2|  488|Caenorhabditis elegans Hypothetical
           protein Y19D10A.11 protein.
          Length = 488

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -2

Query: 279 GLFNLHTISGVICSFALYIFKL 214
           GL N+ TISG+I +F  ++F L
Sbjct: 131 GLGNVQTISGIISAFGAFLFPL 152


>AC006645-11|AAF39850.1|  472|Caenorhabditis elegans Hypothetical
           protein F56A4.12 protein.
          Length = 472

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -2

Query: 279 GLFNLHTISGVICSFALYIFKL 214
           GL N+ TISG+I +F  ++F L
Sbjct: 115 GLGNVQTISGIISAFGAFLFPL 136


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,237,722
Number of Sequences: 27780
Number of extensions: 313845
Number of successful extensions: 884
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 879
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)