Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_M19
(844 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0417 - 25052305-25052398,25052583-25052672,25052740-250529... 137 9e-33
07_03_0920 - 22603868-22603964,22604110-22604222,22604281-226044... 137 1e-32
04_04_1134 + 31137326-31137337,31137964-31138004,31138089-311381... 137 1e-32
08_01_0706 - 6235817-6235988,6236028-6236338,6236421-6236627,623... 131 6e-31
04_04_1135 + 31140032-31140043,31140552-31140592,31140680-311407... 125 5e-29
07_03_0919 - 22594980-22595111,22595398-22595427,22595522-225955... 121 8e-28
01_07_0068 - 40861266-40861381,40861469-40861718,40861813-408619... 31 0.87
12_02_1177 - 26708215-26708309,26708355-26708392,26708476-267095... 29 6.1
11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591 28 8.1
08_02_0383 - 16539472-16539633,16543044-16543205 28 8.1
07_03_0329 + 16840051-16840917,16840999-16841342,16841444-168415... 28 8.1
03_05_0248 + 22348504-22348568,22349064-22349371,22349476-223500... 28 8.1
>04_04_0417 -
25052305-25052398,25052583-25052672,25052740-25052905,
25053547-25053647,25053735-25053775,25054170-25054181
Length = 167
Score = 137 bits (332), Expect = 9e-33
Identities = 70/126 (55%), Positives = 83/126 (65%), Gaps = 12/126 (9%)
Frame = +3
Query: 66 MADQTEKAFQKQATVFLNRKGGMKRKDM-----RHHKNVGLGFKTPXEAIXGTYIDKKCP 230
MA+QTE+AF KQ VFL K K K R KN+GLGFKTP EAI GTYIDKKCP
Sbjct: 1 MAEQTERAFLKQPKVFLCPKKTTKGKKPGKGGNRFWKNIGLGFKTPREAIEGTYIDKKCP 60
Query: 231 FTGNVSIRGRILTGVVQKMXMXRTIVIRRDYLHYLPKYNR-------FXKRHRNMSVHLS 389
FTG VSIRGRI+ G M RTI++RR+YLH++ KY R + KRH N+ H+S
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQVNLVAGYEKRHSNIPAHIS 120
Query: 390 PCFRAR 407
PCFR +
Sbjct: 121 PCFRVK 126
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +1
Query: 415 GDIVTIGECRPLSKTVRFNVL 477
GD V IG+CRPLSKTVRFNVL
Sbjct: 128 GDHVIIGQCRPLSKTVRFNVL 148
>07_03_0920 -
22603868-22603964,22604110-22604222,22604281-22604429,
22604732-22604832,22604917-22604957,22605584-22605595
Length = 170
Score = 137 bits (331), Expect = 1e-32
Identities = 70/128 (54%), Positives = 86/128 (67%), Gaps = 14/128 (10%)
Frame = +3
Query: 66 MADQTEKAFQKQATVFLN-RKGGMKRKD----MRHHKNVGLGFKTPXEAIXGTYIDKKCP 230
MA+QTEKAF KQ VFL+ +K G +K R K++GLGFKTP EAI GTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
Query: 231 FTGNVSIRGRILTGVVQKMXMXRTIVIRRDYLHYLPKYN---------RFXKRHRNMSVH 383
FTG VSIRGRI+ G M RTI++RR+YLH++ KY R+ KRH N+ H
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQGANLPPCRYEKRHSNIPAH 120
Query: 384 LSPCFRAR 407
+SPCFR +
Sbjct: 121 VSPCFRVK 128
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +1
Query: 415 GDIVTIGECRPLSKTVRFNVL 477
GD V IG+CRPLSKTVRFNVL
Sbjct: 130 GDHVIIGQCRPLSKTVRFNVL 150
>04_04_1134 +
31137326-31137337,31137964-31138004,31138089-31138189,
31138489-31138637,31138696-31138808,31138954-31139050
Length = 170
Score = 137 bits (331), Expect = 1e-32
Identities = 70/128 (54%), Positives = 86/128 (67%), Gaps = 14/128 (10%)
Frame = +3
Query: 66 MADQTEKAFQKQATVFLN-RKGGMKRKD----MRHHKNVGLGFKTPXEAIXGTYIDKKCP 230
MA+QTEKAF KQ VFL+ +K G +K R K++GLGFKTP EAI GTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
Query: 231 FTGNVSIRGRILTGVVQKMXMXRTIVIRRDYLHYLPKYN---------RFXKRHRNMSVH 383
FTG VSIRGRI+ G M RTI++RR+YLH++ KY R+ KRH N+ H
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQGANLPPCRYEKRHSNIPAH 120
Query: 384 LSPCFRAR 407
+SPCFR +
Sbjct: 121 VSPCFRVK 128
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +1
Query: 415 GDIVTIGECRPLSKTVRFNVL 477
GD V IG+CRPLSKTVRFNVL
Sbjct: 130 GDHVIIGQCRPLSKTVRFNVL 150
>08_01_0706 -
6235817-6235988,6236028-6236338,6236421-6236627,
6236718-6236889,6236994-6237249,6238015-6238073,
6238693-6238782,6238869-6239013,6239598-6239712,
6240690-6240701
Length = 512
Score = 131 bits (317), Expect = 6e-31
Identities = 60/108 (55%), Positives = 74/108 (68%), Gaps = 4/108 (3%)
Frame = +3
Query: 96 KQATVFLNRKGGMKRKD----MRHHKNVGLGFKTPXEAIXGTYIDKKCPFTGNVSIRGRI 263
+Q F +K G +K R KN+GLGFKTP EAI GTYIDKKCPFTG VSIRGRI
Sbjct: 3 EQVLDFSPKKSGKGKKPGKGGNRFWKNIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRI 62
Query: 264 LTGVVQKMXMXRTIVIRRDYLHYLPKYNRFXKRHRNMSVHLSPCFRAR 407
+ G M RTI++RR+YLH++ KY R+ KRH N+ H+SPCFR +
Sbjct: 63 IAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVK 110
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = +1
Query: 415 GDIVTIGECRPLSKTVRFNVL 477
GD V IG+CRPLSKTVRFNV+
Sbjct: 112 GDHVIIGQCRPLSKTVRFNVI 132
>04_04_1135 +
31140032-31140043,31140552-31140592,31140680-31140780,
31141113-31141419,31141565-31141661
Length = 185
Score = 125 bits (301), Expect = 5e-29
Identities = 70/143 (48%), Positives = 86/143 (60%), Gaps = 29/143 (20%)
Frame = +3
Query: 66 MADQTEKAFQKQATVFLN-RKGGMKRKD----MRHHKNVGLGFKTPXEAIXGTYIDKKCP 230
MA+QTEKAF KQ VFL+ +K G +K R K++GLGFKTP EAI GTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
Query: 231 FTGNVSIRGRILTGVVQKMXMXRTIVIRRDYLHYLPKYN--------------------- 347
FTG VSIRGRI+ G M RTI++RR+YLH++ KY
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQVNNYGFYLCFFSFFFPISD 120
Query: 348 ---RFXKRHRNMSVHLSPCFRAR 407
R+ KRH N+ H+SPCFR +
Sbjct: 121 LGCRYEKRHSNIPAHVSPCFRVK 143
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +1
Query: 415 GDIVTIGECRPLSKTVRFNVL 477
GD V IG+CRPLSKTVRFNVL
Sbjct: 145 GDHVIIGQCRPLSKTVRFNVL 165
>07_03_0919 -
22594980-22595111,22595398-22595427,22595522-22595587,
22596021-22596107,22596868-22596921,22597696-22597762,
22598099-22598215,22598536-22598637,22598784-22598902,
22598966-22599049,22599220-22599354,22599470-22599505,
22599581-22599700,22600557-22600645,22601507-22601596,
22601629-22601802,22602135-22602235,22602323-22602363,
22602872-22602883
Length = 551
Score = 121 bits (291), Expect = 8e-28
Identities = 60/100 (60%), Positives = 72/100 (72%), Gaps = 5/100 (5%)
Frame = +3
Query: 66 MADQTEKAFQKQATVFLN-RKGGMKRKD----MRHHKNVGLGFKTPXEAIXGTYIDKKCP 230
MA+QTEKAF KQ VFL+ +K G +K R K++GLGFKTP EAI GTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
Query: 231 FTGNVSIRGRILTGVVQKMXMXRTIVIRRDYLHYLPKYNR 350
FTG VSIRGRI+ G M RTI++RR+YLH++ KY R
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQR 100
>01_07_0068 -
40861266-40861381,40861469-40861718,40861813-40861914,
40862687-40862759,40863590-40863754,40866380-40866459,
40867565-40867630,40867764-40868123,40868388-40868648
Length = 490
Score = 31.5 bits (68), Expect = 0.87
Identities = 23/65 (35%), Positives = 25/65 (38%)
Frame = -1
Query: 745 RXIRGTNXGNXXAKFTNKAXVSXAX*VXGCPNSSRYRIRXGXN*PSXKGDXXPRYXGGGG 566
R RG G A T V A + GCP+ S YRI G GGGG
Sbjct: 118 RVQRGRGPGGAMATVTLHGGVGMAYRIDGCPSKSEYRISRG---------------GGGG 162
Query: 565 GXGXG 551
G G G
Sbjct: 163 GGGDG 167
>12_02_1177 -
26708215-26708309,26708355-26708392,26708476-26709563,
26709826-26709945,26710018-26710098,26710696-26710812,
26711122-26711904
Length = 773
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -1
Query: 589 PRYXGGGGGXGXGVG 545
PRY GGGGG G G G
Sbjct: 7 PRYGGGGGGGGGGGG 21
>11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591
Length = 573
Score = 28.3 bits (60), Expect = 8.1
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 155 VTHVLPLHATFPVQENGGLFLKRFLCL 75
V H +P+H T+ ++ L+L R +CL
Sbjct: 293 VAHFIPVHTTYSGKKLAELYLARIMCL 319
>08_02_0383 - 16539472-16539633,16543044-16543205
Length = 107
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +3
Query: 264 LTGVVQKMXMXRTIVIRRDYLHYLPKYNRFXKRHRNMSVH 383
+ G+V M +++V+ D L + YNR+ KR H
Sbjct: 4 VVGIVVSNKMQKSVVVAVDRLFHHKMYNRYVKRTSKFMAH 43
>07_03_0329 +
16840051-16840917,16840999-16841342,16841444-16841574,
16841671-16841792,16841877-16841983,16842104-16842236,
16842342-16842458,16842560-16842667,16842716-16842742,
16842759-16842830,16843462-16843584,16843671-16843833,
16844140-16844264,16844355-16844489,16844574-16844677,
16844772-16844834,16844930-16844993,16845186-16845318,
16845414-16845487,16845603-16845697,16845799-16845830,
16846201-16846355
Length = 1097
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 601 GDXXPRYXGGGGGXGXGVGXXR 536
G P Y GGGGG G G G R
Sbjct: 65 GGGPPYYGGGGGGGGGGGGQGR 86
>03_05_0248 +
22348504-22348568,22349064-22349371,22349476-22350039,
22350082-22350128,22351244-22351715,22352349-22352611
Length = 572
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +3
Query: 198 IXGTYIDKKCPFTGNVSIRGRILTGVVQKMXMXRT-IVIRRDYLHYLPKY 344
+ GT PFTG++S G + + KM +V +DYLH K+
Sbjct: 461 VRGTEDAPITPFTGDMSQSGDAIVAALMKMLAINPHLVTDKDYLHTAMKH 510
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,710,594
Number of Sequences: 37544
Number of extensions: 327581
Number of successful extensions: 1271
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1032
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1256
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -