Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_M19
         (844 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS...   149   1e-37
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    24   5.0  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    24   5.0  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   6.7  

>Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS11
           protein.
          Length = 151

 Score =  149 bits (361), Expect = 1e-37
 Identities = 71/113 (62%), Positives = 88/113 (77%), Gaps = 1/113 (0%)
 Frame = +3

Query: 66  MADQTE-KAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPXEAIXGTYIDKKCPFTGN 242
           MADQ   +AFQKQ  + LNRK   ++K +R H ++GLGFKTP EAI GTYIDKKCPFTG+
Sbjct: 1   MADQQNIRAFQKQLGINLNRKNVSRKKGLRMHHSIGLGFKTPKEAITGTYIDKKCPFTGH 60

Query: 243 VSIRGRILTGVVQKMXMXRTIVIRRDYLHYLPKYNRFXKRHRNMSVHLSPCFR 401
           +SIRGRILTGVV+K  +   + IRRDYL ++ KY+ F KR+RNM +HLSPCFR
Sbjct: 61  ISIRGRILTGVVRKCIV--LLYIRRDYLQFIRKYDTFEKRNRNMRLHLSPCFR 111



 Score = 47.6 bits (108), Expect = 5e-07
 Identities = 21/24 (87%), Positives = 22/24 (91%)
 Frame = +1

Query: 406 VXIGDIVTIGECRPLSKTVRFNVL 477
           V  GDIVT+GECRPLSKTVRFNVL
Sbjct: 113 VEAGDIVTLGECRPLSKTVRFNVL 136


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -1

Query: 577 GGGGGXGXGVG 545
           GGGGG G GVG
Sbjct: 558 GGGGGGGGGVG 568



 Score = 23.8 bits (49), Expect = 6.7
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -1

Query: 577 GGGGGXGXGVG 545
           GGGGG G G+G
Sbjct: 562 GGGGGVGGGIG 572


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -1

Query: 577 GGGGGXGXGVG 545
           GGGGG G GVG
Sbjct: 559 GGGGGGGGGVG 569



 Score = 23.8 bits (49), Expect = 6.7
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -1

Query: 577 GGGGGXGXGVG 545
           GGGGG G G+G
Sbjct: 563 GGGGGVGGGIG 573


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -3

Query: 269  GEDAAADRNVASEGTLLVNVGT 204
            GED   D+   S+GTLL  +GT
Sbjct: 1268 GEDDTGDKKTDSDGTLL-EIGT 1288


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 665,845
Number of Sequences: 2352
Number of extensions: 11161
Number of successful extensions: 32
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 89305416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)