Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_M19
(844 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X06617-1|CAA29834.1| 158|Homo sapiens protein ( Human mRNA for ... 179 1e-44
BC100025-1|AAI00026.1| 158|Homo sapiens RPS11 protein protein. 179 1e-44
BC070224-1|AAH70224.1| 158|Homo sapiens ribosomal protein S11 p... 179 1e-44
BC016378-1|AAH16378.1| 158|Homo sapiens ribosomal protein S11 p... 179 1e-44
BC010028-1|AAH10028.1| 158|Homo sapiens ribosomal protein S11 p... 179 1e-44
BC007945-1|AAH07945.1| 158|Homo sapiens RPS11 protein protein. 179 1e-44
BC007603-1|AAH07603.1| 158|Homo sapiens ribosomal protein S11 p... 179 1e-44
BC007283-1|AAH07283.1| 158|Homo sapiens ribosomal protein S11 p... 179 1e-44
AB028893-2|BAA88215.1| 158|Homo sapiens ribosomal protein S11 p... 179 1e-44
AB007152-1|BAA25818.1| 83|Homo sapiens ribosomal protein S11 p... 82 2e-15
>X06617-1|CAA29834.1| 158|Homo sapiens protein ( Human mRNA for
ribosomal protein S11. ).
Length = 158
Score = 179 bits (436), Expect = 1e-44
Identities = 87/118 (73%), Positives = 98/118 (83%), Gaps = 6/118 (5%)
Frame = +3
Query: 66 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPXEAIXGTYIDKKC 227
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP EAI GTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 228 PFTGNVSIRGRILTGVVQKMXMXRTIVIRRDYLHYLPKYNRFXKRHRNMSVHLSPCFR 401
PFTGNVSIRGRIL+GVV KM M RTIVIRRDYLHY+ KYNRF KRH+NMSVHLSPCFR
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118
Score = 50.0 bits (114), Expect = 1e-05
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +1
Query: 406 VXIGDIVTIGECRPLSKTVRFNVL 477
V IGDIVT+GECRPLSKTVRFNVL
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVL 143
>BC100025-1|AAI00026.1| 158|Homo sapiens RPS11 protein protein.
Length = 158
Score = 179 bits (436), Expect = 1e-44
Identities = 87/118 (73%), Positives = 98/118 (83%), Gaps = 6/118 (5%)
Frame = +3
Query: 66 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPXEAIXGTYIDKKC 227
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP EAI GTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 228 PFTGNVSIRGRILTGVVQKMXMXRTIVIRRDYLHYLPKYNRFXKRHRNMSVHLSPCFR 401
PFTGNVSIRGRIL+GVV KM M RTIVIRRDYLHY+ KYNRF KRH+NMSVHLSPCFR
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118
Score = 50.0 bits (114), Expect = 1e-05
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +1
Query: 406 VXIGDIVTIGECRPLSKTVRFNVL 477
V IGDIVT+GECRPLSKTVRFNVL
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVL 143
>BC070224-1|AAH70224.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 179 bits (436), Expect = 1e-44
Identities = 87/118 (73%), Positives = 98/118 (83%), Gaps = 6/118 (5%)
Frame = +3
Query: 66 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPXEAIXGTYIDKKC 227
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP EAI GTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 228 PFTGNVSIRGRILTGVVQKMXMXRTIVIRRDYLHYLPKYNRFXKRHRNMSVHLSPCFR 401
PFTGNVSIRGRIL+GVV KM M RTIVIRRDYLHY+ KYNRF KRH+NMSVHLSPCFR
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118
Score = 50.0 bits (114), Expect = 1e-05
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +1
Query: 406 VXIGDIVTIGECRPLSKTVRFNVL 477
V IGDIVT+GECRPLSKTVRFNVL
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVL 143
>BC016378-1|AAH16378.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 179 bits (436), Expect = 1e-44
Identities = 87/118 (73%), Positives = 98/118 (83%), Gaps = 6/118 (5%)
Frame = +3
Query: 66 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPXEAIXGTYIDKKC 227
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP EAI GTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 228 PFTGNVSIRGRILTGVVQKMXMXRTIVIRRDYLHYLPKYNRFXKRHRNMSVHLSPCFR 401
PFTGNVSIRGRIL+GVV KM M RTIVIRRDYLHY+ KYNRF KRH+NMSVHLSPCFR
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118
Score = 50.0 bits (114), Expect = 1e-05
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +1
Query: 406 VXIGDIVTIGECRPLSKTVRFNVL 477
V IGDIVT+GECRPLSKTVRFNVL
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVL 143
>BC010028-1|AAH10028.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 179 bits (436), Expect = 1e-44
Identities = 87/118 (73%), Positives = 98/118 (83%), Gaps = 6/118 (5%)
Frame = +3
Query: 66 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPXEAIXGTYIDKKC 227
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP EAI GTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 228 PFTGNVSIRGRILTGVVQKMXMXRTIVIRRDYLHYLPKYNRFXKRHRNMSVHLSPCFR 401
PFTGNVSIRGRIL+GVV KM M RTIVIRRDYLHY+ KYNRF KRH+NMSVHLSPCFR
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118
Score = 50.0 bits (114), Expect = 1e-05
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +1
Query: 406 VXIGDIVTIGECRPLSKTVRFNVL 477
V IGDIVT+GECRPLSKTVRFNVL
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVL 143
>BC007945-1|AAH07945.1| 158|Homo sapiens RPS11 protein protein.
Length = 158
Score = 179 bits (436), Expect = 1e-44
Identities = 87/118 (73%), Positives = 98/118 (83%), Gaps = 6/118 (5%)
Frame = +3
Query: 66 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPXEAIXGTYIDKKC 227
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP EAI GTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 228 PFTGNVSIRGRILTGVVQKMXMXRTIVIRRDYLHYLPKYNRFXKRHRNMSVHLSPCFR 401
PFTGNVSIRGRIL+GVV KM M RTIVIRRDYLHY+ KYNRF KRH+NMSVHLSPCFR
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118
Score = 50.0 bits (114), Expect = 1e-05
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +1
Query: 406 VXIGDIVTIGECRPLSKTVRFNVL 477
V IGDIVT+GECRPLSKTVRFNVL
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVL 143
>BC007603-1|AAH07603.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 179 bits (436), Expect = 1e-44
Identities = 87/118 (73%), Positives = 98/118 (83%), Gaps = 6/118 (5%)
Frame = +3
Query: 66 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPXEAIXGTYIDKKC 227
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP EAI GTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 228 PFTGNVSIRGRILTGVVQKMXMXRTIVIRRDYLHYLPKYNRFXKRHRNMSVHLSPCFR 401
PFTGNVSIRGRIL+GVV KM M RTIVIRRDYLHY+ KYNRF KRH+NMSVHLSPCFR
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118
Score = 50.0 bits (114), Expect = 1e-05
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +1
Query: 406 VXIGDIVTIGECRPLSKTVRFNVL 477
V IGDIVT+GECRPLSKTVRFNVL
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVL 143
>BC007283-1|AAH07283.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 179 bits (436), Expect = 1e-44
Identities = 87/118 (73%), Positives = 98/118 (83%), Gaps = 6/118 (5%)
Frame = +3
Query: 66 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPXEAIXGTYIDKKC 227
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP EAI GTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 228 PFTGNVSIRGRILTGVVQKMXMXRTIVIRRDYLHYLPKYNRFXKRHRNMSVHLSPCFR 401
PFTGNVSIRGRIL+GVV KM M RTIVIRRDYLHY+ KYNRF KRH+NMSVHLSPCFR
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118
Score = 50.0 bits (114), Expect = 1e-05
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +1
Query: 406 VXIGDIVTIGECRPLSKTVRFNVL 477
V IGDIVT+GECRPLSKTVRFNVL
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVL 143
>AB028893-2|BAA88215.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 179 bits (436), Expect = 1e-44
Identities = 87/118 (73%), Positives = 98/118 (83%), Gaps = 6/118 (5%)
Frame = +3
Query: 66 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPXEAIXGTYIDKKC 227
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP EAI GTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 228 PFTGNVSIRGRILTGVVQKMXMXRTIVIRRDYLHYLPKYNRFXKRHRNMSVHLSPCFR 401
PFTGNVSIRGRIL+GVV KM M RTIVIRRDYLHY+ KYNRF KRH+NMSVHLSPCFR
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118
Score = 50.0 bits (114), Expect = 1e-05
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +1
Query: 406 VXIGDIVTIGECRPLSKTVRFNVL 477
V IGDIVT+GECRPLSKTVRFNVL
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVL 143
>AB007152-1|BAA25818.1| 83|Homo sapiens ribosomal protein S11
protein.
Length = 83
Score = 82.2 bits (194), Expect = 2e-15
Identities = 36/43 (83%), Positives = 38/43 (88%)
Frame = +3
Query: 273 VVQKMXMXRTIVIRRDYLHYLPKYNRFXKRHRNMSVHLSPCFR 401
VV KM M RTIVIRRDYLHY+ KYNRF KRH+NMSVHLSPCFR
Sbjct: 1 VVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 43
Score = 50.0 bits (114), Expect = 1e-05
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +1
Query: 406 VXIGDIVTIGECRPLSKTVRFNVL 477
V IGDIVT+GECRPLSKTVRFNVL
Sbjct: 45 VQIGDIVTVGECRPLSKTVRFNVL 68
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,172,909
Number of Sequences: 237096
Number of extensions: 1715367
Number of successful extensions: 7154
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7132
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10649685938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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