Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_M19
         (844 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73426-1|CAA97792.1|  155|Caenorhabditis elegans Hypothetical pr...   146   1e-35
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr...    29   4.1  
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p...    29   4.1  

>Z73426-1|CAA97792.1|  155|Caenorhabditis elegans Hypothetical
           protein F40F11.1 protein.
          Length = 155

 Score =  146 bits (355), Expect = 1e-35
 Identities = 69/115 (60%), Positives = 84/115 (73%), Gaps = 3/115 (2%)
 Frame = +3

Query: 66  MADQTEKAFQKQATVFLNRKGGM---KRKDMRHHKNVGLGFKTPXEAIXGTYIDKKCPFT 236
           M++QTE+AF KQ TV LN K  +    +K  R+ + VGLGFK P +A+ GTYIDKKCP+ 
Sbjct: 1   MSEQTERAFLKQPTVNLNNKARILAGSKKTPRYIREVGLGFKAPRDAVEGTYIDKKCPWA 60

Query: 237 GNVSIRGRILTGVVQKMXMXRTIVIRRDYLHYLPKYNRFXKRHRNMSVHLSPCFR 401
           GNV IRG ILTGVV K  M RTIV+RRDYLHY+ KY R+ KRH+N+  H SP FR
Sbjct: 61  GNVPIRGMILTGVVLKNKMTRTIVVRRDYLHYIKKYRRYEKRHKNVPAHCSPAFR 115



 Score = 48.8 bits (111), Expect = 5e-06
 Identities = 23/34 (67%), Positives = 25/34 (73%)
 Frame = +1

Query: 376 PYICRLASGHVXIGDIVTIGECRPLSKTVRFNVL 477
           P  C  A   +  GD+VTIGECRPLSKTVRFNVL
Sbjct: 107 PAHCSPAFRDIHPGDLVTIGECRPLSKTVRFNVL 140


>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
            F25H8.3 protein.
          Length = 2165

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -2

Query: 138  SSCHLSCSGKRWPVSETLSLSDPPFCVDNEKQXLRNSL**DGN 10
            +SC++ CSG++W   E  S S+   C  N K   ++    D N
Sbjct: 1011 ASCYIDCSGRKWNYGEWTSCSET--CGSNGKMHRKSYCVDDSN 1051


>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
            protein F25H8.3 protein.
          Length = 2165

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -2

Query: 138  SSCHLSCSGKRWPVSETLSLSDPPFCVDNEKQXLRNSL**DGN 10
            +SC++ CSG++W   E  S S+   C  N K   ++    D N
Sbjct: 1011 ASCYIDCSGRKWNYGEWTSCSET--CGSNGKMHRKSYCVDDSN 1051


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,460,707
Number of Sequences: 27780
Number of extensions: 260867
Number of successful extensions: 607
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 603
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)