Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_M15
         (1062 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0533 + 3868230-3868564,3869040-3869098,3869187-3869225,386...    55   8e-08
06_03_1052 - 27217792-27217846,27218025-27218114,27218191-272182...    54   2e-07
04_04_0306 + 24280773-24280776,24280906-24280929,24281023-242811...    51   2e-06
08_01_0179 + 1519141-1519144,1519278-1519301,1519417-1519517,151...    48   1e-05
02_04_0507 + 23546911-23546953,23547011-23547111,23547695-235478...    42   0.001
06_03_0570 - 22363197-22363588,22363755-22366782                       29   8.3  

>02_01_0533 +
           3868230-3868564,3869040-3869098,3869187-3869225,
           3869629-3869729,3870288-3870400,3870976-3871075,
           3871170-3871316,3871442-3871502,3871616-3871713,
           3871786-3871928,3872221-3872304,3872389-3872478,
           3872574-3872628
          Length = 474

 Score = 55.2 bits (127), Expect = 8e-08
 Identities = 29/49 (59%), Positives = 33/49 (67%)
 Frame = +1

Query: 517 GKXGAEYVVKSTGVLTTTDKASAHLEGRC*KSYYISLPVLXPPMFXGGV 663
           G  GAEYVV+S+GV TTT+KASAHL+G   K   IS P    PMF  GV
Sbjct: 224 GNFGAEYVVESSGVFTTTEKASAHLKGGA-KKVVISAPSADAPMFVVGV 271



 Score = 30.3 bits (65), Expect = 2.7
 Identities = 25/76 (32%), Positives = 33/76 (43%)
 Frame = +3

Query: 489 KRDPKAXPWGKXWG*ICGKVYWCLNHYR*SICSLGGEVLKKLLYQPPSADXPHVXWWGVT 668
           KRDP   PWG        +          +   L G   KK++   PSAD P +   GV 
Sbjct: 215 KRDPADIPWGNFGAEYVVESSGVFTTTEKASAHLKGGA-KKVVISAPSADAP-MFVVGVN 272

Query: 669 LKAYXPPLLRSISNAS 716
            K+Y P  +  +SNAS
Sbjct: 273 EKSYDPK-MNVVSNAS 287


>06_03_1052 -
           27217792-27217846,27218025-27218114,27218191-27218274,
           27218526-27218668,27218748-27218845,27218959-27219019,
           27219184-27219330,27219428-27219527,27219701-27219813,
           27220302-27220402,27220614-27220652,27220739-27220797,
           27221027-27221088,27221411-27221506
          Length = 415

 Score = 54.0 bits (124), Expect = 2e-07
 Identities = 28/49 (57%), Positives = 33/49 (67%)
 Frame = +1

Query: 517 GKXGAEYVVKSTGVLTTTDKASAHLEGRC*KSYYISLPVLXPPMFXGGV 663
           G  GAEYVV+S+GV TTT+KASAHL+G   +   IS P    PMF  GV
Sbjct: 165 GNFGAEYVVESSGVFTTTEKASAHLKGGA-RKVVISAPSADAPMFVVGV 212


>04_04_0306 +
           24280773-24280776,24280906-24280929,24281023-24281123,
           24281359-24281502,24281667-24281782,24281869-24281968,
           24282068-24282214,24282329-24282389,24282480-24282577,
           24283118-24283260,24283374-24283457,24283538-24283627,
           24284018-24284063
          Length = 385

 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 27/49 (55%), Positives = 32/49 (65%)
 Frame = +1

Query: 517 GKXGAEYVVKSTGVLTTTDKASAHLEGRC*KSYYISLPVLXPPMFXGGV 663
           G+ GAE+VV+STGV T  DKA+AHL+G   K   IS P    PMF  GV
Sbjct: 138 GETGAEFVVESTGVFTDKDKAAAHLKGGA-KKVVISAPSKDAPMFVVGV 185


>08_01_0179 +
           1519141-1519144,1519278-1519301,1519417-1519517,
           1519805-1519920,1519944-1520112,1520713-1520859,
           1520943-1521003,1521086-1521183,1521608-1521750,
           1521980-1522063,1522191-1522280,1522375-1522420
          Length = 360

 Score = 48.4 bits (110), Expect = 1e-05
 Identities = 26/46 (56%), Positives = 30/46 (65%)
 Frame = +1

Query: 526 GAEYVVKSTGVLTTTDKASAHLEGRC*KSYYISLPVLXPPMFXGGV 663
           GAEYVV+STGV T  +KA+AHL+G   K   IS P    PMF  GV
Sbjct: 116 GAEYVVESTGVFTDKEKAAAHLKGGA-KKVVISAPSKDAPMFVCGV 160


>02_04_0507 +
           23546911-23546953,23547011-23547111,23547695-23547810,
           23547897-23547996,23548027-23548215,23548303-23548363,
           23548469-23548566,23548943-23549085,23549228-23549311,
           23549423-23549512,23549599-23549644
          Length = 356

 Score = 41.5 bits (93), Expect = 0.001
 Identities = 18/25 (72%), Positives = 22/25 (88%)
 Frame = +1

Query: 526 GAEYVVKSTGVLTTTDKASAHLEGR 600
           GAEYVV+STGV T  DKA+AHL+G+
Sbjct: 98  GAEYVVESTGVFTDKDKAAAHLKGQ 122



 Score = 29.1 bits (62), Expect = 6.2
 Identities = 27/68 (39%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
 Frame = +2

Query: 593 RGGAKKVIISASQC*XPPCXVVGCYPKSLXTPXFKV-HLKCLLATTNCSCPPLAKXLSHE 769
           +GGAKKV+ISA      P  VVG   K   +    V +  C   TTNC   PLAK ++  
Sbjct: 134 QGGAKKVVISAPSK-DAPMFVVGVNEKEYKSDVNIVSNASC---TTNC-LAPLAKVINDR 188

Query: 770 XLLKLVEG 793
               +VEG
Sbjct: 189 --FGIVEG 194


>06_03_0570 - 22363197-22363588,22363755-22366782
          Length = 1139

 Score = 28.7 bits (61), Expect = 8.3
 Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = -3

Query: 1060 TRIHLGXQGSGGNGHFPVRXGHLRR-QGINPXPHXLLGXAPS 938
            TRIHL       NG  P+  GHLRR   IN   + L G  P+
Sbjct: 109  TRIHLSNNRL--NGEIPIEVGHLRRLVYINLSSNNLTGVIPN 148


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,727,625
Number of Sequences: 37544
Number of extensions: 629968
Number of successful extensions: 1067
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1063
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3152842920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)