Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_M15
(1062 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene prod... 52 9e-07
X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene prod... 52 9e-07
U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd (glyceralde... 52 9e-07
U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd (glyceralde... 52 9e-07
Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical pr... 48 1e-05
Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical pr... 48 1e-05
X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein. 48 1e-05
X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein. 48 1e-05
X04818-1|CAA28504.1| 341|Caenorhabditis elegans glyceraldehyde-... 48 1e-05
Z81473-5|CAB03893.2| 139|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z83116-9|CAD89748.1| 374|Caenorhabditis elegans Hypothetical pr... 28 9.8
U53343-5|AAA96222.1| 556|Caenorhabditis elegans Hypothetical pr... 28 9.8
>X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene product
protein.
Length = 341
Score = 51.6 bits (118), Expect = 9e-07
Identities = 27/49 (55%), Positives = 32/49 (65%)
Frame = +1
Query: 517 GKXGAEYVVKSTGVLTTTDKASAHLEGRC*KSYYISLPVLXPPMFXGGV 663
G GA+YVV+STGV TT +KA+AHL+G K IS P PMF GV
Sbjct: 93 GASGADYVVESTGVFTTIEKANAHLKGGA-KKVIISAPSADAPMFVVGV 140
>X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene product
protein.
Length = 341
Score = 51.6 bits (118), Expect = 9e-07
Identities = 27/49 (55%), Positives = 32/49 (65%)
Frame = +1
Query: 517 GKXGAEYVVKSTGVLTTTDKASAHLEGRC*KSYYISLPVLXPPMFXGGV 663
G GA+YVV+STGV TT +KA+AHL+G K IS P PMF GV
Sbjct: 93 GASGADYVVESTGVFTTIEKANAHLKGGA-KKVIISAPSADAPMFVVGV 140
>U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 2
protein.
Length = 341
Score = 51.6 bits (118), Expect = 9e-07
Identities = 27/49 (55%), Positives = 32/49 (65%)
Frame = +1
Query: 517 GKXGAEYVVKSTGVLTTTDKASAHLEGRC*KSYYISLPVLXPPMFXGGV 663
G GA+YVV+STGV TT +KA+AHL+G K IS P PMF GV
Sbjct: 93 GASGADYVVESTGVFTTIEKANAHLKGGA-KKVIISAPSADAPMFVVGV 140
>U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 3
protein.
Length = 341
Score = 51.6 bits (118), Expect = 9e-07
Identities = 27/49 (55%), Positives = 32/49 (65%)
Frame = +1
Query: 517 GKXGAEYVVKSTGVLTTTDKASAHLEGRC*KSYYISLPVLXPPMFXGGV 663
G GA+YVV+STGV TT +KA+AHL+G K IS P PMF GV
Sbjct: 93 GASGADYVVESTGVFTTIEKANAHLKGGA-KKVIISAPSADAPMFVVGV 140
>Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical
protein T09F3.3 protein.
Length = 341
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/49 (51%), Positives = 31/49 (63%)
Frame = +1
Query: 517 GKXGAEYVVKSTGVLTTTDKASAHLEGRC*KSYYISLPVLXPPMFXGGV 663
G A++VV+STGV TT +KASAHL+G K IS P PM+ GV
Sbjct: 93 GSVKADFVVESTGVFTTKEKASAHLQGGA-KKVIISAPSADAPMYVVGV 140
>Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical
protein F33H1.2 protein.
Length = 341
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/49 (51%), Positives = 31/49 (63%)
Frame = +1
Query: 517 GKXGAEYVVKSTGVLTTTDKASAHLEGRC*KSYYISLPVLXPPMFXGGV 663
G A++VV+STGV TT +KASAHL+G K IS P PM+ GV
Sbjct: 93 GSVKADFVVESTGVFTTKEKASAHLQGGA-KKVIISAPSADAPMYVVGV 140
>X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein.
Length = 341
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/49 (51%), Positives = 31/49 (63%)
Frame = +1
Query: 517 GKXGAEYVVKSTGVLTTTDKASAHLEGRC*KSYYISLPVLXPPMFXGGV 663
G A++VV+STGV TT +KASAHL+G K IS P PM+ GV
Sbjct: 93 GSVKADFVVESTGVFTTKEKASAHLQGGA-KKVIISAPSADAPMYVVGV 140
>X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein.
Length = 341
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/49 (51%), Positives = 31/49 (63%)
Frame = +1
Query: 517 GKXGAEYVVKSTGVLTTTDKASAHLEGRC*KSYYISLPVLXPPMFXGGV 663
G A++VV+STGV TT +KASAHL+G K IS P PM+ GV
Sbjct: 93 GSVKADFVVESTGVFTTKEKASAHLQGGA-KKVIISAPSADAPMYVVGV 140
>X04818-1|CAA28504.1| 341|Caenorhabditis elegans
glyceraldehyde-3-phosphate dehydrogenaseprotein.
Length = 341
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/49 (51%), Positives = 31/49 (63%)
Frame = +1
Query: 517 GKXGAEYVVKSTGVLTTTDKASAHLEGRC*KSYYISLPVLXPPMFXGGV 663
G A++VV+STGV TT +KASAHL+G K IS P PM+ GV
Sbjct: 93 GSVKADFVVESTGVFTTKEKASAHLQGGA-KKVIISAPSADAPMYVVGV 140
>Z81473-5|CAB03893.2| 139|Caenorhabditis elegans Hypothetical
protein C17D12.5 protein.
Length = 139
Score = 29.1 bits (62), Expect = 5.6
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +3
Query: 591 GGEVLKKLLYQPPSADXPHVXWWGVTLKAYXPPLLRSISNASLPPQTVLAP 743
G + + ++PP P + VTLK Y PP I ++PP+ +P
Sbjct: 19 GSGMFYAVRFEPP----PSKTCFDVTLKTYGPPYTEYIVTVAIPPKFPFSP 65
>Z83116-9|CAD89748.1| 374|Caenorhabditis elegans Hypothetical
protein M01B2.11 protein.
Length = 374
Score = 28.3 bits (60), Expect = 9.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 154 ENFCXKLNLXPPTQPXPAXKVTKDWEFF 71
ENF KL+L P T P P + D++ F
Sbjct: 92 ENFAVKLSLLPETYPIPPQCLRSDYKSF 119
>U53343-5|AAA96222.1| 556|Caenorhabditis elegans Hypothetical protein
F22F4.1 protein.
Length = 556
Score = 28.3 bits (60), Expect = 9.8
Identities = 16/72 (22%), Positives = 28/72 (38%)
Frame = -3
Query: 1012 PVRXGHLRRQGINPXPHXLLGXAPSRGAGEWXXFGWXXPPGPSTANKFFXEGXNPTGFXX 833
P + +RR INP + G +P A E+ + N F + P+ +
Sbjct: 66 PPQSSEIRRAPINPLISSMDGYSPQFAASEYNAMPQLSQASDTPRNPFSYQANQPSTYSL 125
Query: 832 LGQXWHGTVSHS 797
+ Q + +S S
Sbjct: 126 MPQTSNNRISQS 137
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,015,694
Number of Sequences: 27780
Number of extensions: 446112
Number of successful extensions: 634
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 622
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2835266498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -