Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_M13
(979 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 34 0.13
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 34 0.13
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 34 0.13
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 0.94
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 0.94
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 0.94
AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical ... 27 1.2
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 28 1.5
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.6
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.6
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 27 3.3
Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical pr... 24 3.4
AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical... 24 3.4
Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical pr... 24 3.4
AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical... 24 3.4
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 5.0
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 26 5.2
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 34.3 bits (75), Expect = 0.13
Identities = 19/62 (30%), Positives = 19/62 (30%)
Frame = +3
Query: 225 PXKWGXXXAPPPXXGGXSPXPNXRXTXXVXRAXPPLX*XAXXXPPPLAKXXPXPLSPXXP 404
P G PPP G P P PP PPP A P P P
Sbjct: 247 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS 306
Query: 405 PP 410
PP
Sbjct: 307 PP 308
Score = 31.9 bits (69), Expect = 0.71
Identities = 20/67 (29%), Positives = 21/67 (31%)
Frame = +3
Query: 222 PPXKWGXXXAPPPXXGGXSPXPNXRXTXXVXRAXPPLX*XAXXXPPPLAKXXPXPLSPXX 401
PP PPP G P P PP PPP + P S
Sbjct: 255 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGS--L 312
Query: 402 PPPXXGG 422
PPP GG
Sbjct: 313 PPPQAGG 319
Score = 31.5 bits (68), Expect = 0.94
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = +3
Query: 255 PPXXGGXSPXPNXRXTXXVXRAXPPLX*XAXXXPPPLAKXXPXPLSPXXPPPXXGG 422
PP P P PP A PPP P P + PPP GG
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 287
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/65 (33%), Positives = 22/65 (33%), Gaps = 2/65 (3%)
Frame = +3
Query: 222 PPXKWGXXXAPPPXXGGXSPXPNXRXTXXVX--RAXPPLX*XAXXXPPPLAKXXPXPLSP 395
PP G PPP GG P P R PP PPP A P P
Sbjct: 273 PPPPTGSP--PPPPAGGSPPPPRAGSPPPPPPPRGSPP----TGSLPPPQAGGSPPPAGT 326
Query: 396 XXPPP 410
PPP
Sbjct: 327 GSPPP 331
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/69 (30%), Positives = 23/69 (33%), Gaps = 3/69 (4%)
Frame = +3
Query: 222 PPXKWGXXXAPPPXXGGXSPXPNXRXTXXVXRAXPPLX*XAXXXPPPLAKXXPXPL---S 392
PP +PP G P P + R P PPP A P P S
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 296
Query: 393 PXXPPPXXG 419
P PPP G
Sbjct: 297 PPPPPPPRG 305
Score = 28.7 bits (61), Expect = 6.7
Identities = 20/67 (29%), Positives = 24/67 (35%)
Frame = +3
Query: 222 PPXKWGXXXAPPPXXGGXSPXPNXRXTXXVXRAXPPLX*XAXXXPPPLAKXXPXPLSPXX 401
PP + G +PPP G P P + RA P PP P P +
Sbjct: 265 PPPRTG---SPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGS-LPPPQAGGS 320
Query: 402 PPPXXGG 422
PPP G
Sbjct: 321 PPPAGTG 327
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 34.3 bits (75), Expect = 0.13
Identities = 19/62 (30%), Positives = 19/62 (30%)
Frame = +3
Query: 225 PXKWGXXXAPPPXXGGXSPXPNXRXTXXVXRAXPPLX*XAXXXPPPLAKXXPXPLSPXXP 404
P G PPP G P P PP PPP A P P P
Sbjct: 268 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS 327
Query: 405 PP 410
PP
Sbjct: 328 PP 329
Score = 31.9 bits (69), Expect = 0.71
Identities = 20/67 (29%), Positives = 21/67 (31%)
Frame = +3
Query: 222 PPXKWGXXXAPPPXXGGXSPXPNXRXTXXVXRAXPPLX*XAXXXPPPLAKXXPXPLSPXX 401
PP PPP G P P PP PPP + P S
Sbjct: 276 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGS--L 333
Query: 402 PPPXXGG 422
PPP GG
Sbjct: 334 PPPQAGG 340
Score = 31.5 bits (68), Expect = 0.94
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = +3
Query: 255 PPXXGGXSPXPNXRXTXXVXRAXPPLX*XAXXXPPPLAKXXPXPLSPXXPPPXXGG 422
PP P P PP A PPP P P + PPP GG
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 308
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/65 (33%), Positives = 22/65 (33%), Gaps = 2/65 (3%)
Frame = +3
Query: 222 PPXKWGXXXAPPPXXGGXSPXPNXRXTXXVX--RAXPPLX*XAXXXPPPLAKXXPXPLSP 395
PP G PPP GG P P R PP PPP A P P
Sbjct: 294 PPPPTGSP--PPPPAGGSPPPPRAGSPPPPPPPRGSPP----TGSLPPPQAGGSPPPAGT 347
Query: 396 XXPPP 410
PPP
Sbjct: 348 GSPPP 352
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/69 (30%), Positives = 23/69 (33%), Gaps = 3/69 (4%)
Frame = +3
Query: 222 PPXKWGXXXAPPPXXGGXSPXPNXRXTXXVXRAXPPLX*XAXXXPPPLAKXXPXPL---S 392
PP +PP G P P + R P PPP A P P S
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 317
Query: 393 PXXPPPXXG 419
P PPP G
Sbjct: 318 PPPPPPPRG 326
Score = 28.7 bits (61), Expect = 6.7
Identities = 20/67 (29%), Positives = 24/67 (35%)
Frame = +3
Query: 222 PPXKWGXXXAPPPXXGGXSPXPNXRXTXXVXRAXPPLX*XAXXXPPPLAKXXPXPLSPXX 401
PP + G +PPP G P P + RA P PP P P +
Sbjct: 286 PPPRTG---SPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGS-LPPPQAGGS 341
Query: 402 PPPXXGG 422
PPP G
Sbjct: 342 PPPAGTG 348
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 34.3 bits (75), Expect = 0.13
Identities = 19/62 (30%), Positives = 19/62 (30%)
Frame = +3
Query: 225 PXKWGXXXAPPPXXGGXSPXPNXRXTXXVXRAXPPLX*XAXXXPPPLAKXXPXPLSPXXP 404
P G PPP G P P PP PPP A P P P
Sbjct: 253 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS 312
Query: 405 PP 410
PP
Sbjct: 313 PP 314
Score = 31.9 bits (69), Expect = 0.71
Identities = 20/67 (29%), Positives = 21/67 (31%)
Frame = +3
Query: 222 PPXKWGXXXAPPPXXGGXSPXPNXRXTXXVXRAXPPLX*XAXXXPPPLAKXXPXPLSPXX 401
PP PPP G P P PP PPP + P S
Sbjct: 261 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGS--L 318
Query: 402 PPPXXGG 422
PPP GG
Sbjct: 319 PPPQAGG 325
Score = 31.5 bits (68), Expect = 0.94
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = +3
Query: 255 PPXXGGXSPXPNXRXTXXVXRAXPPLX*XAXXXPPPLAKXXPXPLSPXXPPPXXGG 422
PP P P PP A PPP P P + PPP GG
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 293
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/65 (33%), Positives = 22/65 (33%), Gaps = 2/65 (3%)
Frame = +3
Query: 222 PPXKWGXXXAPPPXXGGXSPXPNXRXTXXVX--RAXPPLX*XAXXXPPPLAKXXPXPLSP 395
PP G PPP GG P P R PP PPP A P P
Sbjct: 279 PPPPTGSP--PPPPAGGSPPPPRAGSPPPPPPPRGSPP----TGSLPPPQAGGSPPPAGT 332
Query: 396 XXPPP 410
PPP
Sbjct: 333 GSPPP 337
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/69 (30%), Positives = 23/69 (33%), Gaps = 3/69 (4%)
Frame = +3
Query: 222 PPXKWGXXXAPPPXXGGXSPXPNXRXTXXVXRAXPPLX*XAXXXPPPLAKXXPXPL---S 392
PP +PP G P P + R P PPP A P P S
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 302
Query: 393 PXXPPPXXG 419
P PPP G
Sbjct: 303 PPPPPPPRG 311
Score = 28.7 bits (61), Expect = 6.7
Identities = 20/67 (29%), Positives = 24/67 (35%)
Frame = +3
Query: 222 PPXKWGXXXAPPPXXGGXSPXPNXRXTXXVXRAXPPLX*XAXXXPPPLAKXXPXPLSPXX 401
PP + G +PPP G P P + RA P PP P P +
Sbjct: 271 PPPRTG---SPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGS-LPPPQAGGS 326
Query: 402 PPPXXGG 422
PPP G
Sbjct: 327 PPPAGTG 333
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.5 bits (68), Expect = 0.94
Identities = 21/67 (31%), Positives = 22/67 (32%)
Frame = +3
Query: 222 PPXKWGXXXAPPPXXGGXSPXPNXRXTXXVXRAXPPLX*XAXXXPPPLAKXXPXPLSPXX 401
PP G PPP GG P PP+ PPP P P
Sbjct: 720 PPITGGPPPPPPP--GGLPPITGGPPPPPPPGGLPPISGGPPPPPPP-----PGGCPPPP 772
Query: 402 PPPXXGG 422
PPP GG
Sbjct: 773 PPPPPGG 779
Score = 29.5 bits (63), Expect = 3.8
Identities = 16/56 (28%), Positives = 17/56 (30%)
Frame = +3
Query: 255 PPXXGGXSPXPNXRXTXXVXRAXPPLX*XAXXXPPPLAKXXPXPLSPXXPPPXXGG 422
PP GG P P + PP PPP P PPP G
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 749 LPXAXXXPPPXPPPPXRXRXPPXXGXP 829
LP PPP PPPP PP P
Sbjct: 751 LPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 29.1 bits (62), Expect = 5.0
Identities = 20/70 (28%), Positives = 21/70 (30%)
Frame = +3
Query: 210 KXQXPPXKWGXXXAPPPXXGGXSPXPNXRXTXXVXRAXPPLX*XAXXXPPPLAKXXPXPL 389
K PP AP GG S P PP+ PPP P
Sbjct: 682 KIPLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPIT-GGPPPPPPPGGLPPITG 740
Query: 390 SPXXPPPXXG 419
P PPP G
Sbjct: 741 GPPPPPPPGG 750
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.5 bits (68), Expect = 0.94
Identities = 21/67 (31%), Positives = 22/67 (32%)
Frame = +3
Query: 222 PPXKWGXXXAPPPXXGGXSPXPNXRXTXXVXRAXPPLX*XAXXXPPPLAKXXPXPLSPXX 401
PP G PPP GG P PP+ PPP P P
Sbjct: 720 PPITGGPPPPPPP--GGLPPITGGPPPPPPPGGLPPISGGPPPPPPP-----PGGCPPPP 772
Query: 402 PPPXXGG 422
PPP GG
Sbjct: 773 PPPPPGG 779
Score = 29.5 bits (63), Expect = 3.8
Identities = 16/56 (28%), Positives = 17/56 (30%)
Frame = +3
Query: 255 PPXXGGXSPXPNXRXTXXVXRAXPPLX*XAXXXPPPLAKXXPXPLSPXXPPPXXGG 422
PP GG P P + PP PPP P PPP G
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 749 LPXAXXXPPPXPPPPXRXRXPPXXGXP 829
LP PPP PPPP PP P
Sbjct: 751 LPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 29.1 bits (62), Expect = 5.0
Identities = 20/70 (28%), Positives = 21/70 (30%)
Frame = +3
Query: 210 KXQXPPXKWGXXXAPPPXXGGXSPXPNXRXTXXVXRAXPPLX*XAXXXPPPLAKXXPXPL 389
K PP AP GG S P PP+ PPP P
Sbjct: 682 KIPLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPIT-GGPPPPPPPGGLPPITG 740
Query: 390 SPXXPPPXXG 419
P PPP G
Sbjct: 741 GPPPPPPPGG 750
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.5 bits (68), Expect = 0.94
Identities = 21/67 (31%), Positives = 22/67 (32%)
Frame = +3
Query: 222 PPXKWGXXXAPPPXXGGXSPXPNXRXTXXVXRAXPPLX*XAXXXPPPLAKXXPXPLSPXX 401
PP G PPP GG P PP+ PPP P P
Sbjct: 303 PPITGGPPPPPPP--GGLPPITGGPPPPPPPGGLPPISGGPPPPPPP-----PGGCPPPP 355
Query: 402 PPPXXGG 422
PPP GG
Sbjct: 356 PPPPPGG 362
Score = 29.5 bits (63), Expect = 3.8
Identities = 16/56 (28%), Positives = 17/56 (30%)
Frame = +3
Query: 255 PPXXGGXSPXPNXRXTXXVXRAXPPLX*XAXXXPPPLAKXXPXPLSPXXPPPXXGG 422
PP GG P P + PP PPP P PPP G
Sbjct: 319 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 749 LPXAXXXPPPXPPPPXRXRXPPXXGXP 829
LP PPP PPPP PP P
Sbjct: 334 LPPISGGPPPPPPPPGGCPPPPPPPPP 360
Score = 29.1 bits (62), Expect = 5.0
Identities = 20/70 (28%), Positives = 21/70 (30%)
Frame = +3
Query: 210 KXQXPPXKWGXXXAPPPXXGGXSPXPNXRXTXXVXRAXPPLX*XAXXXPPPLAKXXPXPL 389
K PP AP GG S P PP+ PPP P
Sbjct: 265 KIPLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPIT-GGPPPPPPPGGLPPITG 323
Query: 390 SPXXPPPXXG 419
P PPP G
Sbjct: 324 GPPPPPPPGG 333
>AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical
protein Y56A3A.6 protein.
Length = 798
Score = 27.5 bits (58), Expect(2) = 1.2
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 770 PPPXPPPPXRXRXPPXXGXP 829
PPP PPPP PP P
Sbjct: 754 PPPPPPPPPLAAAPPQPKNP 773
Score = 22.2 bits (45), Expect(2) = 1.2
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +2
Query: 752 PXAXXXPPPXPPP 790
P + PPP PPP
Sbjct: 750 PSSTPPPPPPPPP 762
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 28.3 bits (60), Expect(2) = 1.5
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 770 PPPXPPPPXRXRXPP 814
PPP PPPP + PP
Sbjct: 85 PPPPPPPPPTLKAPP 99
Score = 21.0 bits (42), Expect(2) = 1.5
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +2
Query: 758 AXXXPPPXPPP 790
A PPP PPP
Sbjct: 65 ATPPPPPPPPP 75
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 752 PXAXXXPPPXPPPPXRXRXPP 814
P + PPP PPPP R PP
Sbjct: 291 PSSGMWPPPPPPPPGRTPGPP 311
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 752 PXAXXXPPPXPPPPXRXRXPP 814
P + PPP PPPP R PP
Sbjct: 301 PSSGMWPPPPPPPPGRTPGPP 321
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 27.5 bits (58), Expect(2) = 3.3
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 773 PPXPPPPXRXRXPPXXGXP 829
PP PPPP R PP P
Sbjct: 138 PPPPPPPRVPRTPPPRSPP 156
Score = 20.6 bits (41), Expect(2) = 3.3
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +2
Query: 770 PPPXPPP 790
PPP PPP
Sbjct: 122 PPPPPPP 128
>Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 24.2 bits (50), Expect(2) = 3.4
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +2
Query: 752 PXAXXXPPPXPPPP 793
P PPP PPPP
Sbjct: 259 PREKSVPPPPPPPP 272
Score = 23.8 bits (49), Expect(2) = 3.4
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +2
Query: 770 PPPXPPPPXR 799
PPP PPPP +
Sbjct: 266 PPPPPPPPPK 275
>AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 24.2 bits (50), Expect(2) = 3.4
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +2
Query: 752 PXAXXXPPPXPPPP 793
P PPP PPPP
Sbjct: 259 PREKSVPPPPPPPP 272
Score = 23.8 bits (49), Expect(2) = 3.4
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +2
Query: 770 PPPXPPPPXR 799
PPP PPPP +
Sbjct: 266 PPPPPPPPPK 275
>Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 24.2 bits (50), Expect(2) = 3.4
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +2
Query: 752 PXAXXXPPPXPPPP 793
P PPP PPPP
Sbjct: 244 PREKSVPPPPPPPP 257
Score = 23.8 bits (49), Expect(2) = 3.4
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +2
Query: 770 PPPXPPPPXR 799
PPP PPPP +
Sbjct: 251 PPPPPPPPPK 260
>AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 24.2 bits (50), Expect(2) = 3.4
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +2
Query: 752 PXAXXXPPPXPPPP 793
P PPP PPPP
Sbjct: 244 PREKSVPPPPPPPP 257
Score = 23.8 bits (49), Expect(2) = 3.4
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +2
Query: 770 PPPXPPPPXR 799
PPP PPPP +
Sbjct: 251 PPPPPPPPPK 260
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.1 bits (62), Expect = 5.0
Identities = 21/75 (28%), Positives = 21/75 (28%)
Frame = +3
Query: 198 RKTXKXQXPPXKWGXXXAPPPXXGGXSPXPNXRXTXXVXRAXPPLX*XAXXXPPPLAKXX 377
R T K P PPP N PPL PPP
Sbjct: 524 RSTSKDPPRPAPPPVSSIPPPPPIAGLLAANGTNVPIPPPPPPPLPQNLSGAPPPPPPPP 583
Query: 378 PXPLSPXXPPPXXGG 422
P P PPP GG
Sbjct: 584 PMLGGPPPPPPPPGG 598
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 25.8 bits (54), Expect(2) = 5.2
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +2
Query: 770 PPPXPPPPXRXRXPPXXGXP 829
PPP PPPP + P P
Sbjct: 1356 PPPPPPPPTMSKAPTGVPLP 1375
Score = 21.4 bits (43), Expect(2) = 5.2
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +2
Query: 752 PXAXXXPPPXPPP 790
P PPP PPP
Sbjct: 1336 PSPPPPPPPPPPP 1348
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,143,748
Number of Sequences: 27780
Number of extensions: 123493
Number of successful extensions: 2116
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1603
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2542323834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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