Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_M11
(914 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0470 - 10700092-10700505 81 9e-16
10_08_0951 - 21769342-21769752 80 3e-15
02_04_0433 - 22891261-22891509,22892181-22892301,22892405-228924... 35 0.10
08_02_1080 - 24197514-24199415 33 0.32
11_01_0555 - 4388977-4389528 30 2.2
10_08_0425 - 17806117-17806401,17806862-17806984,17807076-178072... 30 2.9
08_02_1046 - 23919990-23920183,23920251-23920479,23920624-239210... 29 3.9
04_04_0211 - 23636377-23636532,23636624-23636805,23637853-236379... 29 6.8
10_07_0138 + 13325418-13325954 28 9.0
09_01_0103 - 1628763-1628879,1641827-1642921,1645126-1645476,164... 28 9.0
>02_02_0470 - 10700092-10700505
Length = 137
Score = 81.4 bits (192), Expect = 9e-16
Identities = 33/71 (46%), Positives = 52/71 (73%)
Frame = +1
Query: 82 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRESAQEDGKE 261
M K +KPGK V++L GRYAGRKA++V+ ++EGT D+PYGH VAG+ +YP++ ++D +
Sbjct: 1 MVKFLKPGKAVILLQGRYAGRKAVIVRVFEEGTRDRPYGHCLVAGLAKYPKKVIRKDSAK 60
Query: 262 *NPQEVQDKAF 294
++ + K F
Sbjct: 61 KTAKKSRVKCF 71
Score = 78.2 bits (184), Expect = 8e-15
Identities = 39/88 (44%), Positives = 57/88 (64%), Gaps = 3/88 (3%)
Frame = +2
Query: 230 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKR-KKL 406
P KV ++ K K+S++K F+K+VN+ H+MPTRYT+D F+ ++ A R KK+
Sbjct: 50 PKKVIRKDSAKKTAKKSRVKCFLKLVNFTHIMPTRYTLDVDFKDVASGGPDALATRDKKV 109
Query: 407 RF--NTRVRFEERYKSGKNKWFFQKLRF 484
+ R EER+K+GKN+WFF KLRF
Sbjct: 110 AACKAAKARLEERFKTGKNRWFFTKLRF 137
>10_08_0951 - 21769342-21769752
Length = 136
Score = 79.8 bits (188), Expect = 3e-15
Identities = 32/71 (45%), Positives = 52/71 (73%)
Frame = +1
Query: 82 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRESAQEDGKE 261
M K +KPGK V++L GR+AGRKA++V+ ++EGT D+PYGH VAG+ +YP++ ++D +
Sbjct: 1 MVKFLKPGKAVILLQGRFAGRKAVIVRVFEEGTRDRPYGHCLVAGLAKYPKKVIRKDSAK 60
Query: 262 *NPQEVQDKAF 294
++ + K F
Sbjct: 61 KTAKKSRVKCF 71
Score = 79.4 bits (187), Expect = 4e-15
Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Frame = +2
Query: 230 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLR 409
P KV ++ K K+S++K F+K+VN+ HLMPTRYT+D ++ +A + KK+
Sbjct: 50 PKKVIRKDSAKKTAKKSRVKCFLKLVNFTHLMPTRYTLDVDLKEVAAGPDALATRDKKVA 109
Query: 410 F--NTRVRFEERYKSGKNKWFFQKLRF 484
+ + R E+R+K+GKN+WFF KLRF
Sbjct: 110 ACKSAKARLEDRFKTGKNRWFFTKLRF 136
>02_04_0433 -
22891261-22891509,22892181-22892301,22892405-22892496,
22892692-22892755,22892855-22892920,22893102-22893193,
22893991-22894050,22894181-22894270,22894484-22894613,
22895066-22895157,22895299-22895373,22895663-22895754,
22896496-22896586,22897541-22897574,22897745-22897791,
22899110-22899209,22899300-22899436,22900837-22901015,
22901146-22901188,22901264-22901297,22901839-22901948,
22902043-22902224,22903062-22903168,22903266-22903480
Length = 833
Score = 34.7 bits (76), Expect = 0.10
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +1
Query: 73 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 177
P+K+ + PG V+++L+GRY G++ + +K G
Sbjct: 68 PTKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSG 102
>08_02_1080 - 24197514-24199415
Length = 633
Score = 33.1 bits (72), Expect = 0.32
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Frame = +2
Query: 158 SRITTKVPPTSHTGMPSSLVSTGTPGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRY 337
S ITT P TS+ + S+ +S K H + KNK+ SKI + NH +
Sbjct: 523 SPITTWTPSTSNLSISSNELSFSGRRKSHSGVAKNKV--TSKINS--NSYSGNHSAKEKL 578
Query: 338 TVDFSFEKFSAKDL-KDPAKRKKLRFNTRVRFEERYK-SGKNKWFFQKL 478
+ SF K S K +K + + F++R + +G+N W Q+L
Sbjct: 579 PHNSSFAKLSDLSANKWSPFLEKFQDLLQSMFQDRKQTAGRNPWLTQRL 627
>11_01_0555 - 4388977-4389528
Length = 183
Score = 30.3 bits (65), Expect = 2.2
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +3
Query: 102 G*SSAGPKWPVRGSQGYRSQELRRRYLRQAIRACLRRWYRQVPPGKCTRGWERIKS 269
G +A +W V + YR LRRR L +R+C R V P + RG+ER+++
Sbjct: 132 GSDAAAQEWLVDQVRVYRDA-LRRRTLAGRLRSCCRA----VMPSRRPRGYERLQT 182
>10_08_0425 -
17806117-17806401,17806862-17806984,17807076-17807222,
17807307-17807450,17808557-17808668,17808762-17808898,
17809016-17809156,17810921-17811004,17811275-17811742,
17811858-17811936,17812494-17812506,17813884-17814460,
17814502-17814774,17814899-17815045,17815354-17815413,
17816124-17816510
Length = 1058
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 845 PGXXXIPPXPXGKXRFXFXGPP 910
PG +PP P G R F GPP
Sbjct: 231 PGAGAMPPNPPGSIRLPFPGPP 252
>08_02_1046 -
23919990-23920183,23920251-23920479,23920624-23921057,
23921426-23921567,23922163-23922255,23923132-23923245,
23924181-23924266,23924458-23924506,23924717-23924783,
23925550-23925665,23925698-23925821,23926465-23926553,
23926810-23927061
Length = 662
Score = 29.5 bits (63), Expect = 3.9
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 132 VRGSQGYRSQELRRRYLRQAIRACLRRWYRQVPPGKCTRG 251
V G+ G + ++RR+L QA+ + R R PP RG
Sbjct: 24 VAGAGGRKRGRVQRRHLTQALESFWRHAPRPAPPAAAARG 63
>04_04_0211 -
23636377-23636532,23636624-23636805,23637853-23637959,
23637997-23638280
Length = 242
Score = 28.7 bits (61), Expect = 6.8
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +1
Query: 82 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 177
M + PG V+++L+GR+ G++ + +K G
Sbjct: 94 MRSSITPGTVLILLAGRFMGKRVVFLKQLKSG 125
>10_07_0138 + 13325418-13325954
Length = 178
Score = 28.3 bits (60), Expect = 9.0
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3
Query: 144 QGYRSQELRRRYLRQAIRACLRRWYRQVPPGKCTRGWERI 263
+G R R R R+ C RRW R +C+R W R+
Sbjct: 82 RGARRCSRRWRRSRRWRSRCSRRWRRSWRRRRCSRRWRRL 121
>09_01_0103 -
1628763-1628879,1641827-1642921,1645126-1645476,
1645567-1645734
Length = 576
Score = 28.3 bits (60), Expect = 9.0
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -3
Query: 408 RSFLRFAGSFRSFALNFSKLKSTV*RV 328
RSFL AG +R F NFSK+ ++ R+
Sbjct: 453 RSFLGLAGYYRRFIENFSKIAKSMTRL 479
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,507,026
Number of Sequences: 37544
Number of extensions: 423667
Number of successful extensions: 991
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 986
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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