Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_M11
(914 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L19527-1|AAA19815.1| 136|Homo sapiens ribosomal protein L27 pro... 116 9e-26
L05094-1|AAC15857.1| 136|Homo sapiens ribosomal protein L27 pro... 116 9e-26
BC098560-1|AAH98560.1| 136|Homo sapiens ribosomal protein L27 p... 116 9e-26
BC021886-1|AAH21886.1| 140|Homo sapiens RPL27 protein protein. 116 9e-26
BC010026-1|AAH10026.1| 136|Homo sapiens ribosomal protein L27 p... 116 9e-26
BC007273-1|AAH07273.1| 136|Homo sapiens ribosomal protein L27 p... 116 9e-26
BC002588-1|AAH02588.1| 136|Homo sapiens ribosomal protein L27 p... 116 9e-26
BC001700-1|AAH01700.1| 136|Homo sapiens ribosomal protein L27 p... 116 9e-26
AB061851-1|BAB79492.1| 136|Homo sapiens ribosomal protein L27 p... 116 9e-26
U25752-1|AAA93226.1| 40|Homo sapiens ribosomal protein L27 pro... 60 8e-09
>L19527-1|AAA19815.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 116 bits (280), Expect = 9e-26
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
Frame = +2
Query: 230 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKK 403
P KV MGK KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K
Sbjct: 50 PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRK 109
Query: 404 LRFNTRVRFEERYKSGKNKWFFQKLRF 484
R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 110 ARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 99.1 bits (236), Expect = 2e-20
Identities = 45/71 (63%), Positives = 56/71 (78%)
Frame = +1
Query: 82 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRESAQEDGKE 261
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPR+ GK+
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 262 *NPQEVQDKAF 294
+ + K+F
Sbjct: 61 KIAKRSKIKSF 71
>L05094-1|AAC15857.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 116 bits (280), Expect = 9e-26
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
Frame = +2
Query: 230 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKK 403
P KV MGK KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K
Sbjct: 50 PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRK 109
Query: 404 LRFNTRVRFEERYKSGKNKWFFQKLRF 484
R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 110 ARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 99.1 bits (236), Expect = 2e-20
Identities = 45/71 (63%), Positives = 56/71 (78%)
Frame = +1
Query: 82 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRESAQEDGKE 261
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPR+ GK+
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 262 *NPQEVQDKAF 294
+ + K+F
Sbjct: 61 KIAKRSKIKSF 71
>BC098560-1|AAH98560.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 116 bits (280), Expect = 9e-26
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
Frame = +2
Query: 230 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKK 403
P KV MGK KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K
Sbjct: 50 PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRK 109
Query: 404 LRFNTRVRFEERYKSGKNKWFFQKLRF 484
R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 110 ARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 99.1 bits (236), Expect = 2e-20
Identities = 45/71 (63%), Positives = 56/71 (78%)
Frame = +1
Query: 82 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRESAQEDGKE 261
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPR+ GK+
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 262 *NPQEVQDKAF 294
+ + K+F
Sbjct: 61 KIAKRSKIKSF 71
>BC021886-1|AAH21886.1| 140|Homo sapiens RPL27 protein protein.
Length = 140
Score = 116 bits (280), Expect = 9e-26
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
Frame = +2
Query: 230 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKK 403
P KV MGK KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K
Sbjct: 54 PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRK 113
Query: 404 LRFNTRVRFEERYKSGKNKWFFQKLRF 484
R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 114 ARREAKVKFEERYKTGKNKWFFQKLRF 140
Score = 78.2 bits (184), Expect = 4e-14
Identities = 35/60 (58%), Positives = 46/60 (76%)
Frame = +1
Query: 115 LVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRESAQEDGKE*NPQEVQDKAF 294
LVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPR+ GK+ + + K+F
Sbjct: 16 LVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSF 75
>BC010026-1|AAH10026.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 116 bits (280), Expect = 9e-26
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
Frame = +2
Query: 230 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKK 403
P KV MGK KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K
Sbjct: 50 PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRK 109
Query: 404 LRFNTRVRFEERYKSGKNKWFFQKLRF 484
R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 110 ARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 99.1 bits (236), Expect = 2e-20
Identities = 45/71 (63%), Positives = 56/71 (78%)
Frame = +1
Query: 82 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRESAQEDGKE 261
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPR+ GK+
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 262 *NPQEVQDKAF 294
+ + K+F
Sbjct: 61 KIAKRSKIKSF 71
>BC007273-1|AAH07273.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 116 bits (280), Expect = 9e-26
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
Frame = +2
Query: 230 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKK 403
P KV MGK KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K
Sbjct: 50 PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRK 109
Query: 404 LRFNTRVRFEERYKSGKNKWFFQKLRF 484
R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 110 ARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 99.1 bits (236), Expect = 2e-20
Identities = 45/71 (63%), Positives = 56/71 (78%)
Frame = +1
Query: 82 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRESAQEDGKE 261
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPR+ GK+
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 262 *NPQEVQDKAF 294
+ + K+F
Sbjct: 61 KIAKRSKIKSF 71
>BC002588-1|AAH02588.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 116 bits (280), Expect = 9e-26
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
Frame = +2
Query: 230 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKK 403
P KV MGK KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K
Sbjct: 50 PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRK 109
Query: 404 LRFNTRVRFEERYKSGKNKWFFQKLRF 484
R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 110 ARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 99.1 bits (236), Expect = 2e-20
Identities = 45/71 (63%), Positives = 56/71 (78%)
Frame = +1
Query: 82 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRESAQEDGKE 261
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPR+ GK+
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 262 *NPQEVQDKAF 294
+ + K+F
Sbjct: 61 KIAKRSKIKSF 71
>BC001700-1|AAH01700.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 116 bits (280), Expect = 9e-26
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
Frame = +2
Query: 230 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKK 403
P KV MGK KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K
Sbjct: 50 PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRK 109
Query: 404 LRFNTRVRFEERYKSGKNKWFFQKLRF 484
R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 110 ARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 99.1 bits (236), Expect = 2e-20
Identities = 45/71 (63%), Positives = 56/71 (78%)
Frame = +1
Query: 82 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRESAQEDGKE 261
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPR+ GK+
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 262 *NPQEVQDKAF 294
+ + K+F
Sbjct: 61 KIAKRSKIKSF 71
>AB061851-1|BAB79492.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 116 bits (280), Expect = 9e-26
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
Frame = +2
Query: 230 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKK 403
P KV MGK KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K
Sbjct: 50 PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRK 109
Query: 404 LRFNTRVRFEERYKSGKNKWFFQKLRF 484
R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 110 ARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 99.1 bits (236), Expect = 2e-20
Identities = 45/71 (63%), Positives = 56/71 (78%)
Frame = +1
Query: 82 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRESAQEDGKE 261
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPR+ GK+
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 262 *NPQEVQDKAF 294
+ + K+F
Sbjct: 61 KIAKRSKIKSF 71
>U25752-1|AAA93226.1| 40|Homo sapiens ribosomal protein L27
protein.
Length = 40
Score = 60.5 bits (140), Expect = 8e-09
Identities = 26/39 (66%), Positives = 33/39 (84%), Gaps = 1/39 (2%)
Frame = +2
Query: 371 KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 484
KD+ +DPA ++K R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 2 KDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 40
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,474,395
Number of Sequences: 237096
Number of extensions: 2430918
Number of successful extensions: 4194
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4185
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11881370308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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