BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_M10
(868 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 34 0.030
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 0.031
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.070
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 33 0.070
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 33 0.070
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.28
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 30 0.37
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 30 0.49
SPAC1952.04c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 27 2.6
SPBC776.05 |||membrane transporter |Schizosaccharomyces pombe|ch... 27 3.5
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 26 6.0
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 6.0
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 26 6.0
SPAC27D7.03c |mei2||RNA-binding protein involved in meiosis Mei2... 26 8.0
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 26 8.0
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.9 bits (74), Expect = 0.030
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +2
Query: 776 PPPPPPPXXPXPXPXPPXXXPP 841
PPPPPPP P PP PP
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPPP 783
Score = 32.7 bits (71), Expect = 0.070
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Frame = +2
Query: 770 PXPPPPPPPXXPXPXPXPP---XXXPPXPRXPP 859
P PPP P P P P PP PP P PP
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 31.9 bits (69), Expect = 0.12
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 776 PPPPPPPXXPXPXPXPPXXXPPXP 847
PPPPP P P P P PP P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAP 756
Score = 30.7 bits (66), Expect = 0.28
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 779 PPPPPPXXPXPXPXPPXXXPPXPRXPP 859
P P P P P P P PP P PP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 29.9 bits (64), Expect = 0.49
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 779 PPPPPPXXPXPXPXPPXXXPPXP 847
PPPPPP PP PP P
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.5 bits (58), Expect = 2.6
Identities = 13/31 (41%), Positives = 13/31 (41%), Gaps = 3/31 (9%)
Frame = +2
Query: 776 PPPPPPPXX---PXPXPXPPXXXPPXPRXPP 859
PPPPPP P P P P P PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPP 762
Score = 25.8 bits (54), Expect = 8.0
Identities = 12/41 (29%), Positives = 12/41 (29%)
Frame = +1
Query: 730 PXXXPPPPPXXXXPXXXXXXXXXXXXXXPPPPXXXPXXPXG 852
P PPP P P PPPP P G
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAG 788
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.3 bits (60), Expect(2) = 0.031
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2
Query: 770 PXPPPPPPPXXP 805
P PPPPPPP P
Sbjct: 236 PAPPPPPPPTLP 247
Score = 27.9 bits (59), Expect = 2.0
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 770 PXPPPPPPPXXPXPXPXPPXXXPPXPRXPP 859
P PP P P P PP PP P PP
Sbjct: 221 PEIPPTYTPKQADPLPAPP--PPPPPTLPP 248
Score = 26.2 bits (55), Expect = 6.0
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 770 PXPPPPPPP 796
P PPPPPPP
Sbjct: 189 PPPPPPPPP 197
Score = 24.2 bits (50), Expect(2) = 0.031
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +2
Query: 785 PPPPXXPXPXPXPP 826
PPPP P P PP
Sbjct: 273 PPPPATPSQPPRPP 286
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 32.7 bits (71), Expect = 0.070
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 770 PXPPPPPPPXXPXPXPXPPXXXPPXPRXPP 859
P PPPPP P P P PP PP
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 30.3 bits (65), Expect = 0.37
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +1
Query: 721 PHXPXXXPPPPPXXXXPXXXXXXXXXXXXXXPPPPXXXPXXPXGPPS 861
P P PP P P PPP P P GPPS
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPS 1729
Score = 29.5 bits (63), Expect = 0.65
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 770 PXPPPPPPPXXPXPXPXPPXXXPPXPRXPP 859
P PP P P P PP PP P PP
Sbjct: 1694 PQSAAPPQMSAPTPPP-PPMSVPPPPSAPP 1722
Score = 29.1 bits (62), Expect = 0.86
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 3/29 (10%)
Frame = +2
Query: 770 PXPP---PPPPPXXPXPXPXPPXXXPPXP 847
P PP PPPP P P P PP P
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 27.5 bits (58), Expect = 2.6
Identities = 13/45 (28%), Positives = 13/45 (28%)
Frame = +1
Query: 721 PHXPXXXPPPPPXXXXPXXXXXXXXXXXXXXPPPPXXXPXXPXGP 855
P PPPPP P PPPP P P
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 32.7 bits (71), Expect = 0.070
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +2
Query: 776 PPPPPPPXXPXPXPXPPXXXPP 841
PPPPPPP P PP PP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 31.5 bits (68), Expect = 0.16
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +2
Query: 776 PPPPPPPXXPXPXPXPPXXXPPXPRXPP 859
PP PPP P P PP PP P PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP--PP 30
Score = 31.5 bits (68), Expect = 0.16
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 770 PXPPPPPPPXXPXPXPXPP 826
P PPPPPP P P PP
Sbjct: 9 PPPPPPPPGFEPPSQPPPP 27
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 32.7 bits (71), Expect = 0.070
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -2
Query: 858 GGXRGXGGXXXGGXGXGXGXXGGGGGGGXG 769
GG RG G GG G G GG GGG G
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRG 41
Score = 29.1 bits (62), Expect = 0.86
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -2
Query: 855 GXRGXGGXXXGGXGXGXGXXGGGGGGGXG 769
G RG GG G G GGG GG G
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARG 37
Score = 29.1 bits (62), Expect = 0.86
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 858 GGXRGXGGXXXGGXGXGXGXXGGGGGGGXG 769
GG RG GG G G GG GG G
Sbjct: 37 GGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
Score = 27.5 bits (58), Expect = 2.6
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 858 GGXRGXGGXXXGGXGXGXGXXGGGGGGGXG 769
GG G G G G G GGG GG G
Sbjct: 16 GGRGGFNGGRGGFGGGRGGARGGGRGGARG 45
Score = 27.5 bits (58), Expect = 2.6
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -2
Query: 858 GGXRGXGGXXXGGXGXGXGXXGGGGGGGXG 769
GG RG G G G G G GG GG G
Sbjct: 41 GGARGGRGGRGGARG-GRGGSSGGRGGAKG 69
Score = 27.1 bits (57), Expect = 3.5
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 855 GXRGXGGXXXGGXGXGXGXXGGGGGG 778
G RG G GG G G GG GG
Sbjct: 45 GGRGGRGGARGGRGGSSGGRGGAKGG 70
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 30.7 bits (66), Expect = 0.28
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 776 PPPPPPPXXPXPXPXPPXXXPPXPRXPP 859
PP P P P PP PP P PP
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPP 151
Score = 27.5 bits (58), Expect = 2.6
Identities = 11/20 (55%), Positives = 11/20 (55%), Gaps = 1/20 (5%)
Frame = +2
Query: 770 PXPPPPPP-PXXPXPXPXPP 826
P PPPPPP P P PP
Sbjct: 3 PAPPPPPPAPAPAAAAPAPP 22
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 30.3 bits (65), Expect = 0.37
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 779 PPPPPPXXPXPXPXPPXXXPPXPRXPP 859
PP PPP P P P PP P PP
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVP--PP 1213
Score = 29.9 bits (64), Expect = 0.49
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 779 PPPPPPXXPXPXPXPPXXXPPXP 847
PP PPP P P P PP P
Sbjct: 1208 PPVPPPSTAPPVPTPSAGLPPVP 1230
Score = 27.5 bits (58), Expect = 2.6
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +2
Query: 770 PXPPPPPPPXXPXPXPXPPXXXPPXPRXPP 859
P PPP P P P P P + PP
Sbjct: 1209 PVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Score = 27.1 bits (57), Expect = 3.5
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = +2
Query: 776 PPPPPPPXXPXPXPXPPXXXPPXPR 850
PP P P P P P PP P+
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPK 1183
Score = 27.1 bits (57), Expect = 3.5
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +2
Query: 770 PXPPPPPPPXXPXPXPXPPXXXPPXPRXP 856
P PPP P P P P PP P
Sbjct: 1190 PVPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Score = 26.6 bits (56), Expect = 4.6
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +2
Query: 779 PPPPPPXXPXPXPXPPXXXPPXPR 850
PP P P P P P PP P+
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPK 1106
Score = 26.6 bits (56), Expect = 4.6
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +2
Query: 779 PPPPPPXXPXPXPXPPXXXPPXP 847
PP P P P P P PP P
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVP 1134
Score = 26.6 bits (56), Expect = 4.6
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +2
Query: 779 PPPPPPXXPXPXPXPPXXXPPXP 847
PP P P P P P PP P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVP 1172
Score = 26.6 bits (56), Expect = 4.6
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +2
Query: 779 PPPPPPXXPXPXPXPPXXXPPXPR 850
PP P P P PP PP P+
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPK 1202
Score = 26.2 bits (55), Expect = 6.0
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +2
Query: 776 PPPPPPPXXPXPXPXPPXXXPPXP 847
PP P P P P P PP P
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVP 1115
Score = 26.2 bits (55), Expect = 6.0
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +2
Query: 779 PPPPPPXXPXPXPXPPXXXPPXP 847
PP P P P P P PP P
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVP 1153
Score = 25.8 bits (54), Expect = 8.0
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 776 PPPPPPPXXPXPXPXPPXXXPPXPRXPP 859
PP P P P P P PP P PP
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVP--PP 1194
Score = 25.8 bits (54), Expect = 8.0
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +2
Query: 779 PPPPPPXXPXPXPXPPXXXPPXP 847
PP P P P PP PP P
Sbjct: 1198 PPVPKPSVGVPPVPPPSTAPPVP 1220
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.9 bits (64), Expect = 0.49
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 770 PXPPPPPPPXXPXPXPXPPXXXPPXPRXPP 859
P PPPPP P PP P PP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 28.7 bits (61), Expect = 1.1
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 770 PXPPPPPPPXXPXPXPXPPXXXPPXPRXPP 859
P PP PP P P P P P PP
Sbjct: 429 PSLPPSAPPSLPMGAPAAPPLPPSAPIAPP 458
Score = 27.5 bits (58), Expect = 2.6
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 10/40 (25%)
Frame = +2
Query: 770 PXPPPP----------PPPXXPXPXPXPPXXXPPXPRXPP 859
P PPPP PP P P PP P R PP
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPP 377
Score = 27.1 bits (57), Expect = 3.5
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +2
Query: 776 PPPPPPPXXPXPXPXPPXXXPPXPRXPP 859
PP PP P P P P P PP
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPP 451
Score = 25.8 bits (54), Expect = 8.0
Identities = 12/30 (40%), Positives = 12/30 (40%), Gaps = 2/30 (6%)
Frame = +2
Query: 776 PPPPPPPXXPXPXPX--PPXXXPPXPRXPP 859
PP P PP P P PP P P P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAP 444
Score = 25.8 bits (54), Expect = 8.0
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +2
Query: 770 PXPPPPPPPXXPXPXPXPPXXXPPXPRXPP 859
P PP PP P P PP P P
Sbjct: 425 PSAPPSLPPSAPPSLPMGAPAAPPLPPSAP 454
>SPAC1952.04c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 158
Score = 27.5 bits (58), Expect = 2.6
Identities = 18/68 (26%), Positives = 29/68 (42%)
Frame = -1
Query: 292 RATHIVKHQSLINQHSTQKRHRHDLPEDISQGLLSLPHCFFNDDTSSPLGLFSGLSTPGX 113
R +H ++ + + Q+R R DLP + H FF +S + + P
Sbjct: 48 RCSHCGWYEPVDSAMIDQRRRREDLPTPERPEASAQQHAFFPGSSSQQTDIPN--VRPQP 105
Query: 112 HEPPEKKS 89
H PP +KS
Sbjct: 106 HIPPPRKS 113
>SPBC776.05 |||membrane transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 27.1 bits (57), Expect = 3.5
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -3
Query: 161 YIITAGIVLWFVDAWXT*TAGEEITKVLNALIRFYDP 51
Y I+ G + W V AW I K+ + I F+ P
Sbjct: 193 YSISYGTLAWSVVAWRNSLLFHSIDKITSLFIHFFPP 229
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 26.2 bits (55), Expect = 6.0
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 770 PXPPPPPPP 796
P PPPPPPP
Sbjct: 306 PPPPPPPPP 314
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 26.2 bits (55), Expect = 6.0
Identities = 12/29 (41%), Positives = 12/29 (41%), Gaps = 3/29 (10%)
Frame = +2
Query: 782 PPPPPXXPXPXPXPPXXXPP---XPRXPP 859
PPPPP P PP P P PP
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPP 1910
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 26.2 bits (55), Expect = 6.0
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 770 PXPPPPPPP 796
P PPPPPPP
Sbjct: 945 PPPPPPPPP 953
Score = 23.4 bits (48), Expect(2) = 6.8
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 770 PXPPPPPP 793
P PPPPPP
Sbjct: 905 PTPPPPPP 912
Score = 20.6 bits (41), Expect(2) = 6.8
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +2
Query: 776 PPPPPPPXXPXP 811
P PPPP P P
Sbjct: 942 PAFPPPPPPPPP 953
>SPAC27D7.03c |mei2||RNA-binding protein involved in meiosis
Mei2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 750
Score = 25.8 bits (54), Expect = 8.0
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 376 LSAKDFLSDVSIAHTPLSLAQLLDTRTDLFNIYGEFLKN-NNVIFNNA 516
LS + ++ ++ T S + +D TD NI+ F+ N NN F+ A
Sbjct: 56 LSGPSPIRNIQLSATKSSESNSIDYLTDTQNIFPNFVNNENNYQFSTA 103
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 25.8 bits (54), Expect = 8.0
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Frame = +3
Query: 63 PDQCIKNFGDFFSGGSCXPGVDKPENNPSGDDVSSL-KKQCGSDSSPCEMSS 215
PDQ IKN G+ + PE D + ++ KK + CE SS
Sbjct: 809 PDQEIKNSRTSVQNGTRSVSKNTPEKETKVDKIDNVSKKDVETSPGSCETSS 860
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,086,231
Number of Sequences: 5004
Number of extensions: 61877
Number of successful extensions: 490
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 375
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 432473040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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