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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_M10
         (868 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||...    34   0.030
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ...    28   0.031
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit...    33   0.070
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac...    33   0.070
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr...    33   0.070
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M...    31   0.28 
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual    30   0.37 
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1...    30   0.49 
SPAC1952.04c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual       27   2.6  
SPBC776.05 |||membrane transporter |Schizosaccharomyces pombe|ch...    27   3.5  
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S...    26   6.0  
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc...    26   6.0  
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1...    26   6.0  
SPAC27D7.03c |mei2||RNA-binding protein involved in meiosis Mei2...    26   8.0  
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc...    26   8.0  

>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 1461

 Score = 33.9 bits (74), Expect = 0.030
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = +2

Query: 776 PPPPPPPXXPXPXPXPPXXXPP 841
           PPPPPPP      P PP   PP
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPPP 783



 Score = 32.7 bits (71), Expect = 0.070
 Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
 Frame = +2

Query: 770 PXPPPPPPPXXPXPXPXPP---XXXPPXPRXPP 859
           P PPP P    P P P PP      PP P  PP
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782



 Score = 31.9 bits (69), Expect = 0.12
 Identities = 12/24 (50%), Positives = 12/24 (50%)
 Frame = +2

Query: 776 PPPPPPPXXPXPXPXPPXXXPPXP 847
           PPPPP    P P P P    PP P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAP 756



 Score = 30.7 bits (66), Expect = 0.28
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = +2

Query: 779 PPPPPPXXPXPXPXPPXXXPPXPRXPP 859
           P P P   P P P P    PP P  PP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPP 768



 Score = 29.9 bits (64), Expect = 0.49
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = +2

Query: 779 PPPPPPXXPXPXPXPPXXXPPXP 847
           PPPPPP        PP   PP P
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPP 783



 Score = 27.5 bits (58), Expect = 2.6
 Identities = 13/31 (41%), Positives = 13/31 (41%), Gaps = 3/31 (9%)
 Frame = +2

Query: 776 PPPPPPPXX---PXPXPXPPXXXPPXPRXPP 859
           PPPPPP      P P P P     P    PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPP 762



 Score = 25.8 bits (54), Expect = 8.0
 Identities = 12/41 (29%), Positives = 12/41 (29%)
 Frame = +1

Query: 730 PXXXPPPPPXXXXPXXXXXXXXXXXXXXPPPPXXXPXXPXG 852
           P   PPP P    P              PPPP   P    G
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAG 788


>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1420

 Score = 28.3 bits (60), Expect(2) = 0.031
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +2

Query: 770 PXPPPPPPPXXP 805
           P PPPPPPP  P
Sbjct: 236 PAPPPPPPPTLP 247



 Score = 27.9 bits (59), Expect = 2.0
 Identities = 13/30 (43%), Positives = 13/30 (43%)
 Frame = +2

Query: 770 PXPPPPPPPXXPXPXPXPPXXXPPXPRXPP 859
           P  PP   P    P P PP   PP P  PP
Sbjct: 221 PEIPPTYTPKQADPLPAPP--PPPPPTLPP 248



 Score = 26.2 bits (55), Expect = 6.0
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +2

Query: 770 PXPPPPPPP 796
           P PPPPPPP
Sbjct: 189 PPPPPPPPP 197



 Score = 24.2 bits (50), Expect(2) = 0.031
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 785 PPPPXXPXPXPXPP 826
           PPPP  P   P PP
Sbjct: 273 PPPPATPSQPPRPP 286


>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
            hand and WH2 motif |Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 1794

 Score = 32.7 bits (71), Expect = 0.070
 Identities = 13/30 (43%), Positives = 13/30 (43%)
 Frame = +2

Query: 770  PXPPPPPPPXXPXPXPXPPXXXPPXPRXPP 859
            P PPPPP    P P   P    PP    PP
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734



 Score = 30.3 bits (65), Expect = 0.37
 Identities = 15/47 (31%), Positives = 15/47 (31%)
 Frame = +1

Query: 721  PHXPXXXPPPPPXXXXPXXXXXXXXXXXXXXPPPPXXXPXXPXGPPS 861
            P  P   PP  P    P               PPP   P  P GPPS
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPS 1729



 Score = 29.5 bits (63), Expect = 0.65
 Identities = 13/30 (43%), Positives = 13/30 (43%)
 Frame = +2

Query: 770  PXPPPPPPPXXPXPXPXPPXXXPPXPRXPP 859
            P    PP    P P P PP   PP P  PP
Sbjct: 1694 PQSAAPPQMSAPTPPP-PPMSVPPPPSAPP 1722



 Score = 29.1 bits (62), Expect = 0.86
 Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 3/29 (10%)
 Frame = +2

Query: 770  PXPP---PPPPPXXPXPXPXPPXXXPPXP 847
            P PP   PPPP   P P   P    PP P
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736



 Score = 27.5 bits (58), Expect = 2.6
 Identities = 13/45 (28%), Positives = 13/45 (28%)
 Frame = +1

Query: 721  PHXPXXXPPPPPXXXXPXXXXXXXXXXXXXXPPPPXXXPXXPXGP 855
            P      PPPPP    P              PPPP      P  P
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744


>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
           Spp42|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 2363

 Score = 32.7 bits (71), Expect = 0.070
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = +2

Query: 776 PPPPPPPXXPXPXPXPPXXXPP 841
           PPPPPPP    P   PP   PP
Sbjct: 9   PPPPPPPPGFEPPSQPPPPPPP 30



 Score = 31.5 bits (68), Expect = 0.16
 Identities = 14/28 (50%), Positives = 14/28 (50%)
 Frame = +2

Query: 776 PPPPPPPXXPXPXPXPPXXXPPXPRXPP 859
           PP  PPP  P P   PP   PP P  PP
Sbjct: 5   PPGNPPPPPPPPGFEPPSQPPPPP--PP 30



 Score = 31.5 bits (68), Expect = 0.16
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +2

Query: 770 PXPPPPPPPXXPXPXPXPP 826
           P PPPPPP   P   P PP
Sbjct: 9   PPPPPPPPGFEPPSQPPPP 27


>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 305

 Score = 32.7 bits (71), Expect = 0.070
 Identities = 15/30 (50%), Positives = 15/30 (50%)
 Frame = -2

Query: 858 GGXRGXGGXXXGGXGXGXGXXGGGGGGGXG 769
           GG RG  G   GG G   G  GG  GGG G
Sbjct: 12  GGSRGGRGGFNGGRGGFGGGRGGARGGGRG 41



 Score = 29.1 bits (62), Expect = 0.86
 Identities = 13/29 (44%), Positives = 13/29 (44%)
 Frame = -2

Query: 855 GXRGXGGXXXGGXGXGXGXXGGGGGGGXG 769
           G RG      GG   G G  GGG GG  G
Sbjct: 9   GGRGGSRGGRGGFNGGRGGFGGGRGGARG 37



 Score = 29.1 bits (62), Expect = 0.86
 Identities = 13/30 (43%), Positives = 13/30 (43%)
 Frame = -2

Query: 858 GGXRGXGGXXXGGXGXGXGXXGGGGGGGXG 769
           GG RG      GG G   G  GG  GG  G
Sbjct: 37  GGGRGGARGGRGGRGGARGGRGGSSGGRGG 66



 Score = 27.5 bits (58), Expect = 2.6
 Identities = 13/30 (43%), Positives = 13/30 (43%)
 Frame = -2

Query: 858 GGXRGXGGXXXGGXGXGXGXXGGGGGGGXG 769
           GG  G  G   G  G   G  GGG GG  G
Sbjct: 16  GGRGGFNGGRGGFGGGRGGARGGGRGGARG 45



 Score = 27.5 bits (58), Expect = 2.6
 Identities = 14/30 (46%), Positives = 14/30 (46%)
 Frame = -2

Query: 858 GGXRGXGGXXXGGXGXGXGXXGGGGGGGXG 769
           GG RG  G   G  G G G   GG GG  G
Sbjct: 41  GGARGGRGGRGGARG-GRGGSSGGRGGAKG 69



 Score = 27.1 bits (57), Expect = 3.5
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = -2

Query: 855 GXRGXGGXXXGGXGXGXGXXGGGGGG 778
           G RG  G   GG G   G  GG  GG
Sbjct: 45  GGRGGRGGARGGRGGSSGGRGGAKGG 70


>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 309

 Score = 30.7 bits (66), Expect = 0.28
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = +2

Query: 776 PPPPPPPXXPXPXPXPPXXXPPXPRXPP 859
           PP  P P  P     PP   PP P  PP
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPP 151



 Score = 27.5 bits (58), Expect = 2.6
 Identities = 11/20 (55%), Positives = 11/20 (55%), Gaps = 1/20 (5%)
 Frame = +2

Query: 770 PXPPPPPP-PXXPXPXPXPP 826
           P PPPPPP P      P PP
Sbjct: 3   PAPPPPPPAPAPAAAAPAPP 22


>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1611

 Score = 30.3 bits (65), Expect = 0.37
 Identities = 13/27 (48%), Positives = 13/27 (48%)
 Frame = +2

Query: 779  PPPPPPXXPXPXPXPPXXXPPXPRXPP 859
            PP PPP    P P P    PP P  PP
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVP--PP 1213



 Score = 29.9 bits (64), Expect = 0.49
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = +2

Query: 779  PPPPPPXXPXPXPXPPXXXPPXP 847
            PP PPP    P P P    PP P
Sbjct: 1208 PPVPPPSTAPPVPTPSAGLPPVP 1230



 Score = 27.5 bits (58), Expect = 2.6
 Identities = 11/30 (36%), Positives = 12/30 (40%)
 Frame = +2

Query: 770  PXPPPPPPPXXPXPXPXPPXXXPPXPRXPP 859
            P PPP   P  P P    P    P  + PP
Sbjct: 1209 PVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238



 Score = 27.1 bits (57), Expect = 3.5
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = +2

Query: 776  PPPPPPPXXPXPXPXPPXXXPPXPR 850
            PP P P     P P P    PP P+
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPK 1183



 Score = 27.1 bits (57), Expect = 3.5
 Identities = 11/29 (37%), Positives = 11/29 (37%)
 Frame = +2

Query: 770  PXPPPPPPPXXPXPXPXPPXXXPPXPRXP 856
            P PPP   P  P P    P   PP    P
Sbjct: 1190 PVPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218



 Score = 26.6 bits (56), Expect = 4.6
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +2

Query: 779  PPPPPPXXPXPXPXPPXXXPPXPR 850
            PP P P    P P P    PP P+
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPK 1106



 Score = 26.6 bits (56), Expect = 4.6
 Identities = 10/23 (43%), Positives = 10/23 (43%)
 Frame = +2

Query: 779  PPPPPPXXPXPXPXPPXXXPPXP 847
            PP P P    P P P    PP P
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVP 1134



 Score = 26.6 bits (56), Expect = 4.6
 Identities = 10/23 (43%), Positives = 10/23 (43%)
 Frame = +2

Query: 779  PPPPPPXXPXPXPXPPXXXPPXP 847
            PP P P    P P P    PP P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVP 1172



 Score = 26.6 bits (56), Expect = 4.6
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +2

Query: 779  PPPPPPXXPXPXPXPPXXXPPXPR 850
            PP P P    P   PP   PP P+
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPK 1202



 Score = 26.2 bits (55), Expect = 6.0
 Identities = 10/24 (41%), Positives = 10/24 (41%)
 Frame = +2

Query: 776  PPPPPPPXXPXPXPXPPXXXPPXP 847
            PP P P     P P P    PP P
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVP 1115



 Score = 26.2 bits (55), Expect = 6.0
 Identities = 10/23 (43%), Positives = 10/23 (43%)
 Frame = +2

Query: 779  PPPPPPXXPXPXPXPPXXXPPXP 847
            PP P P    P P P    PP P
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVP 1153



 Score = 25.8 bits (54), Expect = 8.0
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = +2

Query: 776  PPPPPPPXXPXPXPXPPXXXPPXPRXPP 859
            PP P P     P P P    PP P  PP
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVP--PP 1194



 Score = 25.8 bits (54), Expect = 8.0
 Identities = 10/23 (43%), Positives = 10/23 (43%)
 Frame = +2

Query: 779  PPPPPPXXPXPXPXPPXXXPPXP 847
            PP P P    P   PP   PP P
Sbjct: 1198 PPVPKPSVGVPPVPPPSTAPPVP 1220


>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 574

 Score = 29.9 bits (64), Expect = 0.49
 Identities = 12/30 (40%), Positives = 12/30 (40%)
 Frame = +2

Query: 770 PXPPPPPPPXXPXPXPXPPXXXPPXPRXPP 859
           P PPPPP        P PP      P  PP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366



 Score = 28.7 bits (61), Expect = 1.1
 Identities = 12/30 (40%), Positives = 12/30 (40%)
 Frame = +2

Query: 770 PXPPPPPPPXXPXPXPXPPXXXPPXPRXPP 859
           P  PP  PP  P   P  P   P  P  PP
Sbjct: 429 PSLPPSAPPSLPMGAPAAPPLPPSAPIAPP 458



 Score = 27.5 bits (58), Expect = 2.6
 Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 10/40 (25%)
 Frame = +2

Query: 770 PXPPPP----------PPPXXPXPXPXPPXXXPPXPRXPP 859
           P PPPP          PP     P P PP   P   R PP
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPP 377



 Score = 27.1 bits (57), Expect = 3.5
 Identities = 11/28 (39%), Positives = 11/28 (39%)
 Frame = +2

Query: 776 PPPPPPPXXPXPXPXPPXXXPPXPRXPP 859
           PP  PP   P   P  P   P  P  PP
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPP 451



 Score = 25.8 bits (54), Expect = 8.0
 Identities = 12/30 (40%), Positives = 12/30 (40%), Gaps = 2/30 (6%)
 Frame = +2

Query: 776 PPPPPPPXXPXPXPX--PPXXXPPXPRXPP 859
           PP P PP  P   P   PP   P  P   P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAP 444



 Score = 25.8 bits (54), Expect = 8.0
 Identities = 11/30 (36%), Positives = 11/30 (36%)
 Frame = +2

Query: 770 PXPPPPPPPXXPXPXPXPPXXXPPXPRXPP 859
           P  PP  PP  P   P      PP P   P
Sbjct: 425 PSAPPSLPPSAPPSLPMGAPAAPPLPPSAP 454


>SPAC1952.04c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 158

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 18/68 (26%), Positives = 29/68 (42%)
 Frame = -1

Query: 292 RATHIVKHQSLINQHSTQKRHRHDLPEDISQGLLSLPHCFFNDDTSSPLGLFSGLSTPGX 113
           R +H   ++ + +    Q+R R DLP        +  H FF   +S    + +    P  
Sbjct: 48  RCSHCGWYEPVDSAMIDQRRRREDLPTPERPEASAQQHAFFPGSSSQQTDIPN--VRPQP 105

Query: 112 HEPPEKKS 89
           H PP +KS
Sbjct: 106 HIPPPRKS 113


>SPBC776.05 |||membrane transporter |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 404

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -3

Query: 161 YIITAGIVLWFVDAWXT*TAGEEITKVLNALIRFYDP 51
           Y I+ G + W V AW        I K+ +  I F+ P
Sbjct: 193 YSISYGTLAWSVVAWRNSLLFHSIDKITSLFIHFFPP 229


>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
           Cap1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 551

 Score = 26.2 bits (55), Expect = 6.0
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +2

Query: 770 PXPPPPPPP 796
           P PPPPPPP
Sbjct: 306 PPPPPPPPP 314


>SPAC29B12.07 |sec16||multidomain vesicle coat component
            Sec16|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1995

 Score = 26.2 bits (55), Expect = 6.0
 Identities = 12/29 (41%), Positives = 12/29 (41%), Gaps = 3/29 (10%)
 Frame = +2

Query: 782  PPPPPXXPXPXPXPPXXXPP---XPRXPP 859
            PPPPP    P   PP   P     P  PP
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPP 1910


>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1841

 Score = 26.2 bits (55), Expect = 6.0
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +2

Query: 770 PXPPPPPPP 796
           P PPPPPPP
Sbjct: 945 PPPPPPPPP 953



 Score = 23.4 bits (48), Expect(2) = 6.8
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +2

Query: 770 PXPPPPPP 793
           P PPPPPP
Sbjct: 905 PTPPPPPP 912



 Score = 20.6 bits (41), Expect(2) = 6.8
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +2

Query: 776 PPPPPPPXXPXP 811
           P  PPPP  P P
Sbjct: 942 PAFPPPPPPPPP 953


>SPAC27D7.03c |mei2||RNA-binding protein involved in meiosis
           Mei2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 750

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +1

Query: 376 LSAKDFLSDVSIAHTPLSLAQLLDTRTDLFNIYGEFLKN-NNVIFNNA 516
           LS    + ++ ++ T  S +  +D  TD  NI+  F+ N NN  F+ A
Sbjct: 56  LSGPSPIRNIQLSATKSSESNSIDYLTDTQNIFPNFVNNENNYQFSTA 103


>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
           homolog|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 997

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
 Frame = +3

Query: 63  PDQCIKNFGDFFSGGSCXPGVDKPENNPSGDDVSSL-KKQCGSDSSPCEMSS 215
           PDQ IKN       G+     + PE     D + ++ KK   +    CE SS
Sbjct: 809 PDQEIKNSRTSVQNGTRSVSKNTPEKETKVDKIDNVSKKDVETSPGSCETSS 860


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,086,231
Number of Sequences: 5004
Number of extensions: 61877
Number of successful extensions: 490
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 375
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 432473040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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