Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_M09
         (852 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z11115-2|CAA77450.1|  599|Caenorhabditis elegans Hypothetical pr...    37   0.021
U64843-12|AAL08039.1|  492|Caenorhabditis elegans Hypothetical p...    31   0.79 

>Z11115-2|CAA77450.1|  599|Caenorhabditis elegans Hypothetical
           protein ZK637.3 protein.
          Length = 599

 Score = 36.7 bits (81), Expect = 0.021
 Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 10/84 (11%)
 Frame = +1

Query: 307 GIIAAFGDFNSDELTDAFVIKNSSTVNVFLAYDKEPFLRPSEFTCNFS----------DI 456
           G + AFGDFN+D  TD  V  N +    +        L  S+FT   S          D 
Sbjct: 29  GKVCAFGDFNADRNTDILVFANGTLTINYQETKLLDVLEASKFTPGTSFAISKPSLNADF 88

Query: 457 VITSIVPGDYDGDAYMDILLTTQN 528
           V  S+  GD++GD+ +D+L++ ++
Sbjct: 89  VECSV--GDFNGDSRLDVLVSIRD 110


>U64843-12|AAL08039.1|  492|Caenorhabditis elegans Hypothetical
           protein K06C4.9 protein.
          Length = 492

 Score = 31.5 bits (68), Expect = 0.79
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = -3

Query: 151 IGNLLLKFYTFVNKLI*MLYVTYYVHYLLNSVKCPQKILRIPY 23
           I NLLL  Y+     I +++ T Y   L   V C  KI RIP+
Sbjct: 418 ISNLLLVIYSASTVFIYLIFSTKYRKVLSTCVTCGYKISRIPF 460


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,830,070
Number of Sequences: 27780
Number of extensions: 394148
Number of successful extensions: 843
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 842
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)