Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_M06
         (915 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    31   1.1  
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    31   1.1  
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    31   1.1  
Z81555-7|CAB04518.1|  561|Caenorhabditis elegans Hypothetical pr...    29   3.5  
AY525080-1|AAS13529.1|  362|Caenorhabditis elegans serine or cys...    29   3.5  
AC087794-5|AAM48555.1|  362|Caenorhabditis elegans Serpin protei...    29   3.5  
Z48367-5|CAE54886.1|  993|Caenorhabditis elegans Hypothetical pr...    29   6.1  
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr...    29   6.1  
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ...    29   6.1  
Z68752-4|CAA92983.1|  447|Caenorhabditis elegans Hypothetical pr...    28   8.1  
U10438-9|AAU87834.1|  616|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 20/61 (32%), Positives = 21/61 (34%)
 Frame = +3

Query: 708 PATSTXPPXXPPPXXPP*XSXPRPXYKLLAXRXGXXXPHPNLKIXFKGAPPPXXPXPXCS 887
           P T   PP  PP   PP    P P             P P     FKG PPP  P    +
Sbjct: 737 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP--PGGFKGGPPPPPPPGMFA 794

Query: 888 P 890
           P
Sbjct: 795 P 795


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 20/61 (32%), Positives = 21/61 (34%)
 Frame = +3

Query: 708 PATSTXPPXXPPPXXPP*XSXPRPXYKLLAXRXGXXXPHPNLKIXFKGAPPPXXPXPXCS 887
           P T   PP  PP   PP    P P             P P     FKG PPP  P    +
Sbjct: 737 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP--PGGFKGGPPPPPPPGMFA 794

Query: 888 P 890
           P
Sbjct: 795 P 795


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 20/61 (32%), Positives = 21/61 (34%)
 Frame = +3

Query: 708 PATSTXPPXXPPPXXPP*XSXPRPXYKLLAXRXGXXXPHPNLKIXFKGAPPPXXPXPXCS 887
           P T   PP  PP   PP    P P             P P     FKG PPP  P    +
Sbjct: 320 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP--PGGFKGGPPPPPPPGMFA 377

Query: 888 P 890
           P
Sbjct: 378 P 378


>Z81555-7|CAB04518.1|  561|Caenorhabditis elegans Hypothetical
           protein F58E10.3a protein.
          Length = 561

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = -1

Query: 786 YXGAGGXXIKGGGXGGXXRGG 724
           Y G GG    GGG GG  RGG
Sbjct: 44  YGGGGGGGYGGGGYGGGGRGG 64


>AY525080-1|AAS13529.1|  362|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 362

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 19/84 (22%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
 Frame = +2

Query: 218 IQXKSIVLSAFSVLPPLAQLALASDGETHEELLKAI--GFPDDDAIRTEFASKSRDLRS- 388
           +  +S+V S  S+   L+ +     G + +++   +  G  D+  +   F+  S+++++ 
Sbjct: 19  VHNESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVE-HFSFVSKEVKNG 77

Query: 389 IXGVXLXMANKVYVHDGGXLDENF 460
             GV + +ANKVY+  G  ++  F
Sbjct: 78  TKGVEVYLANKVYLKKGFTVNPTF 101


>AC087794-5|AAM48555.1|  362|Caenorhabditis elegans Serpin protein 3
           protein.
          Length = 362

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 19/84 (22%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
 Frame = +2

Query: 218 IQXKSIVLSAFSVLPPLAQLALASDGETHEELLKAI--GFPDDDAIRTEFASKSRDLRS- 388
           +  +S+V S  S+   L+ +     G + +++   +  G  D+  +   F+  S+++++ 
Sbjct: 19  VHNESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVE-HFSFVSKEVKNG 77

Query: 389 IXGVXLXMANKVYVHDGGXLDENF 460
             GV + +ANKVY+  G  ++  F
Sbjct: 78  TKGVEVYLANKVYLKKGFTVNPTF 101


>Z48367-5|CAE54886.1|  993|Caenorhabditis elegans Hypothetical
           protein C33B4.3b protein.
          Length = 993

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 19/56 (33%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
 Frame = +3

Query: 717 STXPPXXPPPXXPP*XSXPRPXYKLLAX--RXGXXXPHPNLKIXFKGAPPPXXPXP 878
           S+ PP  PPP  PP    P   +             P P L     GAPPP  P P
Sbjct: 762 SSIPPPPPPP--PPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPPPP 815


>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
           protein C33B4.3a protein.
          Length = 1110

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 19/56 (33%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
 Frame = +3

Query: 717 STXPPXXPPPXXPP*XSXPRPXYKLLAX--RXGXXXPHPNLKIXFKGAPPPXXPXP 878
           S+ PP  PPP  PP    P   +             P P L     GAPPP  P P
Sbjct: 762 SSIPPPPPPP--PPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPPPP 815


>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
           protein Y48G9A.4 protein.
          Length = 1115

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 21/60 (35%), Positives = 22/60 (36%), Gaps = 4/60 (6%)
 Frame = +3

Query: 711 ATSTXPPXXPPPXXPP*XSXPRPXYKLLAXRXGXXX----PHPNLKIXFKGAPPPXXPXP 878
           +TS  PP   PP        P P   LLA           P P L     GAPPP  P P
Sbjct: 525 STSKDPPRPAPPPVSS-IPPPPPIAGLLAANGTNVPIPPPPPPPLPQNLSGAPPPPPPPP 583


>Z68752-4|CAA92983.1|  447|Caenorhabditis elegans Hypothetical
           protein T12G3.4 protein.
          Length = 447

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -1

Query: 159 HIREICDGCHCRDGDSKQTNDCLHVCGLRLSNV 61
           H  ++  G H  DG  K+ N C    GLRLS+V
Sbjct: 147 HAVQLAQGNHDCDGSYKKMNLCGRPLGLRLSDV 179


>U10438-9|AAU87834.1|  616|Caenorhabditis elegans Hypothetical
           protein B0280.13 protein.
          Length = 616

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 18/67 (26%), Positives = 22/67 (32%), Gaps = 3/67 (4%)
 Frame = +3

Query: 714 TSTXPPXXPPPXXPP*XSXPRPXYKLLAXRXGXXXPHPNLKIXF---KGAPPPXXPXPXC 884
           +ST PP  P P  PP    P P             P P            PPP  P P  
Sbjct: 462 SSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPP 521

Query: 885 SPXXKRD 905
            P  +++
Sbjct: 522 PPALEQE 528


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,496,315
Number of Sequences: 27780
Number of extensions: 324768
Number of successful extensions: 1401
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1301
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)