Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_M05
         (887 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF137868-1|ABM30606.1|  194|Homo sapiens immune receptor CD300d ...    34   0.60 
AY358148-1|AAQ88515.1|  194|Homo sapiens CMRF35A4 protein.             34   0.60 
CR407658-1|CAG28586.1|  323|Homo sapiens CCNH protein.                 31   7.4  
BC022351-1|AAH22351.1|  323|Homo sapiens cyclin H protein.             31   7.4  

>EF137868-1|ABM30606.1|  194|Homo sapiens immune receptor CD300d
           protein.
          Length = 194

 Score = 34.3 bits (75), Expect = 0.60
 Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
 Frame = +3

Query: 297 VRCAYGEGTR-YIPLLIRARELWKELNELTKTNIYEKCGVLNTGLGDSSFIDNARRSAEI 473
           V+CAYG G   Y+    +  + W   N L KTN  E+    N      S  DN +    +
Sbjct: 37  VQCAYGSGWETYLKWRCQGAD-WNYCNILVKTNGSEQEVKKNR----VSIRDNQKN--HV 89

Query: 474 YGLEIENMTAEDIKKRWNGIQVPGDYVGV 560
           + + +EN+  +D    W G + PG  +GV
Sbjct: 90  FTVTMENLKRDDADSYWCGTERPGIDLGV 118


>AY358148-1|AAQ88515.1|  194|Homo sapiens CMRF35A4 protein.
          Length = 194

 Score = 34.3 bits (75), Expect = 0.60
 Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
 Frame = +3

Query: 297 VRCAYGEGTR-YIPLLIRARELWKELNELTKTNIYEKCGVLNTGLGDSSFIDNARRSAEI 473
           V+CAYG G   Y+    +  + W   N L KTN  E+    N      S  DN +    +
Sbjct: 37  VQCAYGSGWETYLKWRCQGAD-WNYCNILVKTNGSEQEVKKNR----VSIRDNQKN--HV 89

Query: 474 YGLEIENMTAEDIKKRWNGIQVPGDYVGV 560
           + + +EN+  +D    W G + PG  +GV
Sbjct: 90  FTVTMENLKRDDADSYWCGTERPGIDLGV 118


>CR407658-1|CAG28586.1|  323|Homo sapiens CCNH protein.
          Length = 323

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
 Frame = +2

Query: 269 WEPPRSDQAGAV--RLRRRHQIHSALDTSQRTLEGAE*ID----KDKHLREVWS 412
           +EPPRS++A  +  +L R H    AL+   +  +G E  D    K KH  E W+
Sbjct: 262 YEPPRSEEAAVLKQKLERCHSAELALNVITKKRKGYEDDDYVSKKSKHEEEEWT 315


>BC022351-1|AAH22351.1|  323|Homo sapiens cyclin H protein.
          Length = 323

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
 Frame = +2

Query: 269 WEPPRSDQAGAV--RLRRRHQIHSALDTSQRTLEGAE*ID----KDKHLREVWS 412
           +EPPRS++A  +  +L R H    AL+   +  +G E  D    K KH  E W+
Sbjct: 262 YEPPRSEEAAVLKQKLERCHSAELALNVITKKRKGYEDDDYVSKKSKHEEEEWT 315


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,955,030
Number of Sequences: 237096
Number of extensions: 2338573
Number of successful extensions: 4567
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4567
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)