Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_M05
         (887 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23529-6|AAL32208.1|  384|Caenorhabditis elegans Hypothetical pr...    40   0.002
U39645-7|AAA80364.1|  190|Caenorhabditis elegans Hypothetical pr...    30   2.5  

>U23529-6|AAL32208.1|  384|Caenorhabditis elegans Hypothetical
           protein C15B12.1 protein.
          Length = 384

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 30/160 (18%), Positives = 68/160 (42%)
 Frame = +3

Query: 156 YDLIIXXXXXXXXXXXXXXXXXXLKVLMLDEHTXXXXXXXXXXATRLVRCAYGEGTRYIP 335
           YD+++                  LK L+L++             +R+ R A+ E   Y+ 
Sbjct: 5   YDVVVVGAGIFGSCTAYNCQKIGLKTLLLEQFELGHKNGSSHGKSRITRYAHTE-VEYVD 63

Query: 336 LLIRARELWKELNELTKTNIYEKCGVLNTGLGDSSFIDNARRSAEIYGLEIENMTAEDIK 515
           L+  A     EL  +    +++K G+L    G+   ++    + ++ G++ E +   ++ 
Sbjct: 64  LVGDAYNQIFELERIRGEKLWKKTGLLWVSTGNE--VEKIHTNLKLKGIKHEVIKGTEVG 121

Query: 516 KRWNGIQVPGDYVGVFEPDAGFLRSELAVNAYVKLSKEAG 635
           KR+   +    + G+ +P  G + ++  +NA+    K+ G
Sbjct: 122 KRYPQFKFDDSWNGLIDPMGGVIYADKWLNAFRDEFKKIG 161


>U39645-7|AAA80364.1|  190|Caenorhabditis elegans Hypothetical
           protein C14F11.6 protein.
          Length = 190

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 20/65 (30%), Positives = 31/65 (47%)
 Frame = +3

Query: 462 SAEIYGLEIENMTAEDIKKRWNGIQVPGDYVGVFEPDAGFLRSELAVNAYVKLSKEAGAH 641
           S EI+ + ++         +W+G+ + GD    F   AGFL      + +  LSKE GAH
Sbjct: 87  SGEIFDVAVDIRKDSPTYGKWHGVVLNGDNKHAFWIPAGFL------HGFQVLSKE-GAH 139

Query: 642 QIFDC 656
             + C
Sbjct: 140 VTYKC 144


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,451,834
Number of Sequences: 27780
Number of extensions: 361919
Number of successful extensions: 784
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 784
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)