Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_M02
         (961 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.    23   4.1  
AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor pro...    23   4.1  

>U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.
          Length = 53

 Score = 23.0 bits (47), Expect = 4.1
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +1

Query: 823 PGPXXPXPXXXPXPSLPRQRP 885
           P P  P P   P P+ P Q P
Sbjct: 22  PLPNVPQPGRRPFPTFPGQGP 42


>AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor
           protein.
          Length = 33

 Score = 23.0 bits (47), Expect = 4.1
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +1

Query: 823 PGPXXPXPXXXPXPSLPRQRP 885
           P P  P P   P P+ P Q P
Sbjct: 8   PLPNVPQPGRRPFPTFPGQGP 28


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.315    0.146    0.514 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,454
Number of Sequences: 438
Number of extensions: 1489
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 31565079
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)