Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_M01
         (945 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000E46EE6 Cluster: PREDICTED: hypothetical protein,...    39   0.21 
UniRef50_Q3Y402 Cluster: Putative uncharacterized protein; n=3; ...    36   1.1  
UniRef50_Q5AY31 Cluster: Putative uncharacterized protein; n=1; ...    36   1.5  
UniRef50_A5USV4 Cluster: Putative uncharacterized protein; n=2; ...    36   2.0  
UniRef50_O45021 Cluster: Putative uncharacterized protein; n=2; ...    35   3.5  
UniRef50_A5UZ67 Cluster: ATPase (AAA+ superfamily)-like protein;...    34   4.6  
UniRef50_Q9NA94 Cluster: Putative uncharacterized protein; n=2; ...    34   6.1  
UniRef50_A5CTV8 Cluster: Putative uncharacterized protein; n=1; ...    33   8.0  
UniRef50_A2F306 Cluster: Putative uncharacterized protein; n=1; ...    33   8.0  

>UniRef50_UPI0000E46EE6 Cluster: PREDICTED: hypothetical protein,
           partial; n=1; Strongylocentrotus purpuratus|Rep:
           PREDICTED: hypothetical protein, partial -
           Strongylocentrotus purpuratus
          Length = 280

 Score = 38.7 bits (86), Expect = 0.21
 Identities = 18/46 (39%), Positives = 25/46 (54%)
 Frame = +3

Query: 324 FKFVEVSXADSPDLTEPPYYLKSPGLTGDAKLAXDRGPAVLXAAXQ 461
           F+  EV+  D PDLT+ P++L +PGL G  +L    G   L    Q
Sbjct: 9   FETAEVNVVDCPDLTQQPFHLAAPGLCGSPRLTDVGGVPYLVPLAQ 54


>UniRef50_Q3Y402 Cluster: Putative uncharacterized protein; n=3;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 284

 Score = 36.3 bits (80), Expect = 1.1
 Identities = 17/41 (41%), Positives = 25/41 (60%)
 Frame = +3

Query: 324 FKFVEVSXADSPDLTEPPYYLKSPGLTGDAKLAXDRGPAVL 446
           F+ VEV+  D PDL++PP+  KS G   + ++A   GP  L
Sbjct: 10  FENVEVNIVDCPDLSKPPFNQKSSGFGHNLRIAEVGGPGNL 50


>UniRef50_Q5AY31 Cluster: Putative uncharacterized protein; n=1;
           Emericella nidulans|Rep: Putative uncharacterized
           protein - Emericella nidulans (Aspergillus nidulans)
          Length = 727

 Score = 35.9 bits (79), Expect = 1.5
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +3

Query: 315 QRTFKFVEVSXADSPDLTEPPYYLKSPGLTGDAKLAXDRGPAVL 446
           Q+ F     S    PDL +PPY L + GL+G+ ++A   G A L
Sbjct: 425 QQNFAHASASVTQCPDLRKPPYGLAASGLSGNPRIADVGGQANL 468


>UniRef50_A5USV4 Cluster: Putative uncharacterized protein; n=2;
           Roseiflexus|Rep: Putative uncharacterized protein -
           Roseiflexus sp. RS-1
          Length = 548

 Score = 35.5 bits (78), Expect = 2.0
 Identities = 20/42 (47%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +2

Query: 584 TPSXRNGTA-DPPLPRIVSRAPSTSAPXXXTXLPXSNTPXPT 706
           TP+ R+ TA  PP P +   AP T A    T LP +NTP PT
Sbjct: 334 TPAPRSPTATPPPPPTMTPTAPPTEASPTNTPLP-TNTPSPT 374


>UniRef50_O45021 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 730

 Score = 34.7 bits (76), Expect = 3.5
 Identities = 15/36 (41%), Positives = 17/36 (47%)
 Frame = +1

Query: 574 GIPNPXXPQRXCRPPATPNSVPCTQYERPXXPHXPT 681
           G+P P  P R C PP TP + P      P  P  PT
Sbjct: 121 GVPAPPNPPRTCCPPPTPAAPPPPPPPPPPAPEAPT 156


>UniRef50_A5UZ67 Cluster: ATPase (AAA+ superfamily)-like protein; n=9;
            cellular organisms|Rep: ATPase (AAA+ superfamily)-like
            protein - Roseiflexus sp. RS-1
          Length = 1122

 Score = 34.3 bits (75), Expect = 4.6
 Identities = 17/46 (36%), Positives = 20/46 (43%)
 Frame = +1

Query: 571  QGIPNPXXPQRXCRPPATPNSVPCTQYERPXXPHXPTXQQHAXPNR 708
            +G  NP  P      P TP+S P T +  P  PH      HA P R
Sbjct: 1007 KGATNPGAPHSS---PLTPHSSPLTPHSSPLTPHSSPLTPHATPRR 1049


>UniRef50_Q9NA94 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 603

 Score = 33.9 bits (74), Expect = 6.1
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = +1

Query: 583 NPXXPQRXCRPPATPNSVPCTQYERPXXPHXPTXQQHAXPNR 708
           NP  P R  +PP  P +VP    + P  PH P       PN+
Sbjct: 445 NPTPPPRLPQPPTAPPTVPPPPNQAPIVPHQPMYVPLINPNQ 486


>UniRef50_A5CTV8 Cluster: Putative uncharacterized protein; n=1;
           Clavibacter michiganensis subsp. michiganensis NCPPB
           382|Rep: Putative uncharacterized protein - Clavibacter
           michiganensis subsp. michiganensis (strain NCPPB 382)
          Length = 455

 Score = 33.5 bits (73), Expect = 8.0
 Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
 Frame = +2

Query: 500 T*TATPPSSPALEPDRGRTCX*XARVYQTPSXRNGTADPPLPRIVSRAPS-TSAPXXXTX 676
           T TATP ++P +EP              TP+    T  P +P     AP+ T  P   T 
Sbjct: 252 TATATPTATPTVEPTTPAPT--PTVPTPTPTVPTPTPTPTVPTPTPTAPTPTPTPTAPTP 309

Query: 677 LPXSNTPXPT 706
            P + TP PT
Sbjct: 310 TPTAPTPTPT 319


>UniRef50_A2F306 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 472

 Score = 33.5 bits (73), Expect = 8.0
 Identities = 21/65 (32%), Positives = 26/65 (40%)
 Frame = +2

Query: 512 TPPSSPALEPDRGRTCX*XARVYQTPSXRNGTADPPLPRIVSRAPSTSAPXXXTXLPXSN 691
           TP +    +P    T        QTP+  + T +P  PR     P T AP   T  P   
Sbjct: 250 TPQTPAPTDPTPAPTDPTPEPTPQTPAPTDPTPEPT-PRTPEPTPQTPAPTDPTPEPTPR 308

Query: 692 TPXPT 706
           TP PT
Sbjct: 309 TPEPT 313


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 562,962,111
Number of Sequences: 1657284
Number of extensions: 8813139
Number of successful extensions: 38211
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 25318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37374
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 86957532651
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)