Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_M01
         (945 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1450 + 30246702-30247346,30248603-30248689,30248789-302489...    30   3.1  
05_03_0458 + 14280953-14281866,14281964-14282912                       30   3.1  
10_08_0683 - 19860777-19861070,19861677-19861874,19862498-198626...    29   4.1  
09_06_0110 + 20923523-20924065                                         29   4.1  

>06_03_1450 +
           30246702-30247346,30248603-30248689,30248789-30248920,
           30249016-30249162,30250375-30250440,30250519-30250629,
           30251551-30251584,30251667-30251743,30251829-30251906
          Length = 458

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 15/43 (34%), Positives = 18/43 (41%)
 Frame = +1

Query: 580 PNPXXPQRXCRPPATPNSVPCTQYERPXXPHXPTXQQHAXPNR 708
           P P  P +   PPA P   P   YE P  PH P    +   +R
Sbjct: 52  PPPADPPQYAPPPAAPQPQPYYPYEPP--PHNPAPSPYPSLDR 92


>05_03_0458 + 14280953-14281866,14281964-14282912
          Length = 620

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = +1

Query: 580 PNPXXPQRXCRPPATPNSVPCTQYERPXXPHXPTXQQHA 696
           P P  P +   PP  P ++ C+ +  P  P  PT    A
Sbjct: 65  PPPLPPLQPTPPPLPPTTLSCSSHPTPPPPPSPTTSPSA 103


>10_08_0683 -
           19860777-19861070,19861677-19861874,19862498-19862659,
           19862763-19862911,19863089-19863236,19863317-19863385,
           19863471-19863719,19863937-19864131,19864444-19864560,
           19864978-19866537
          Length = 1046

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = +1

Query: 613 PPATPNSVPCTQYERPXXPHXPTXQQHAXP 702
           PP  P   P   +  P  P+ P  Q HA P
Sbjct: 57  PPPQPQPQPYAHHSAPLQPYPPPPQHHAYP 86


>09_06_0110 + 20923523-20924065
          Length = 180

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = +1

Query: 610 RPPATPNSVPCTQYERPXXPHXPTXQQHA 696
           +PPATP   P      P  PH P  QQHA
Sbjct: 36  QPPATPPQPPLLPL--PARPHAPPPQQHA 62


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,156,689
Number of Sequences: 37544
Number of extensions: 280314
Number of successful extensions: 2097
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2037
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2717819680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)