Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_M01
         (945 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U53149-6|AAZ82856.1|  284|Caenorhabditis elegans Hypothetical pr...    36   0.032
AF043706-2|AAB97604.2|  730|Caenorhabditis elegans Hypothetical ...    35   0.097
Z69360-4|CAC42291.2|  732|Caenorhabditis elegans Hypothetical pr...    34   0.17 
Z69360-3|CAA93286.2|  369|Caenorhabditis elegans Hypothetical pr...    34   0.17 
Z69360-2|CAA93285.2|  780|Caenorhabditis elegans Hypothetical pr...    34   0.17 
AL132949-22|CAB70112.2|  603|Caenorhabditis elegans Hypothetical...    34   0.17 

>U53149-6|AAZ82856.1|  284|Caenorhabditis elegans Hypothetical
           protein C24B5.4 protein.
          Length = 284

 Score = 36.3 bits (80), Expect = 0.032
 Identities = 17/41 (41%), Positives = 25/41 (60%)
 Frame = +3

Query: 324 FKFVEVSXADSPDLTEPPYYLKSPGLTGDAKLAXDRGPAVL 446
           F+ VEV+  D PDL++PP+  KS G   + ++A   GP  L
Sbjct: 10  FENVEVNIVDCPDLSKPPFNQKSSGFGHNLRIAEVGGPGNL 50


>AF043706-2|AAB97604.2|  730|Caenorhabditis elegans Hypothetical
           protein ZC123.1 protein.
          Length = 730

 Score = 34.7 bits (76), Expect = 0.097
 Identities = 15/36 (41%), Positives = 17/36 (47%)
 Frame = +1

Query: 574 GIPNPXXPQRXCRPPATPNSVPCTQYERPXXPHXPT 681
           G+P P  P R C PP TP + P      P  P  PT
Sbjct: 121 GVPAPPNPPRTCCPPPTPAAPPPPPPPPPPAPEAPT 156


>Z69360-4|CAC42291.2|  732|Caenorhabditis elegans Hypothetical
           protein F25H8.5c protein.
          Length = 732

 Score = 33.9 bits (74), Expect = 0.17
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +1

Query: 571 QGIPNPXXPQRXCRPPATPNSVPCTQYERPXXP 669
           Q  P P  P+  C PP  P   PC QY++P  P
Sbjct: 89  QPTPGPPPPRNNCLPPPGP-PPPCQQYQQPQPP 120


>Z69360-3|CAA93286.2|  369|Caenorhabditis elegans Hypothetical
           protein F25H8.5b protein.
          Length = 369

 Score = 33.9 bits (74), Expect = 0.17
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +1

Query: 571 QGIPNPXXPQRXCRPPATPNSVPCTQYERPXXP 669
           Q  P P  P+  C PP  P   PC QY++P  P
Sbjct: 89  QPTPGPPPPRNNCLPPPGP-PPPCQQYQQPQPP 120


>Z69360-2|CAA93285.2|  780|Caenorhabditis elegans Hypothetical
           protein F25H8.5a protein.
          Length = 780

 Score = 33.9 bits (74), Expect = 0.17
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +1

Query: 571 QGIPNPXXPQRXCRPPATPNSVPCTQYERPXXP 669
           Q  P P  P+  C PP  P   PC QY++P  P
Sbjct: 89  QPTPGPPPPRNNCLPPPGP-PPPCQQYQQPQPP 120


>AL132949-22|CAB70112.2|  603|Caenorhabditis elegans Hypothetical
           protein Y53F4B.25 protein.
          Length = 603

 Score = 33.9 bits (74), Expect = 0.17
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = +1

Query: 583 NPXXPQRXCRPPATPNSVPCTQYERPXXPHXPTXQQHAXPNR 708
           NP  P R  +PP  P +VP    + P  PH P       PN+
Sbjct: 445 NPTPPPRLPQPPTAPPTVPPPPNQAPIVPHQPMYVPLINPNQ 486


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,670,341
Number of Sequences: 27780
Number of extensions: 207635
Number of successful extensions: 980
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2444174194
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)