Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_L18
         (933 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomy...   121   2e-28
SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism...   115   8e-27
SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde reduc...    82   1e-16
SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyc...    72   1e-13
SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyc...    61   2e-10
SPCC965.06 |||potassium channel subunit |Schizosaccharomyces pom...    33   0.044
SPAC3G9.14 |sak1||transcriptional repressor Sak1|Schizosaccharom...    31   0.23 
SPAC11E3.14 |||conserved protein|Schizosaccharomyces pombe|chr 1...    27   3.8  
SPAC25A8.02 |||sequence orphan|Schizosaccharomyces pombe|chr 1||...    26   6.6  
SPAC9E9.17c |||dubiuos|Schizosaccharomyces pombe|chr 1|||Manual        26   8.7  

>SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 321

 Score =  121 bits (291), Expect = 2e-28
 Identities = 57/111 (51%), Positives = 72/111 (64%)
 Frame = +2

Query: 146 PLFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDL 325
           P  GLGTW+S+P +   AVK A+  GYRHID A +YGNE EVG+ I    KE  V R+D+
Sbjct: 25  PGLGLGTWRSEPNQTKNAVKTALQYGYRHIDAAAIYGNEDEVGDGI----KESGVPRKDI 80

Query: 326 FITSKLWNTFHRPXLVRGALQETLDXLNVQYLDLYLIHWPQAYKEXGSLFP 478
           ++TSKLW   H P  V  AL++TL  L + YLD YLIHWP ++K     FP
Sbjct: 81  WVTSKLWCNAHAPEAVPKALEKTLKDLKLDYLDEYLIHWPVSFKTGEDKFP 131


>SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 325

 Score =  115 bits (277), Expect = 8e-27
 Identities = 55/102 (53%), Positives = 69/102 (67%)
 Frame = +2

Query: 146 PLFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDL 325
           P  GLGTW+S   E   AV  A+  GYRHID A++YGNEKE+GE I    +E  V R D+
Sbjct: 24  PSIGLGTWRSGKDETKNAVCAALKAGYRHIDTAHIYGNEKEIGEGI----RESGVPRTDI 79

Query: 326 FITSKLWNTFHRPXLVRGALQETLDXLNVQYLDLYLIHWPQA 451
           ++TSKLW   HR  LV  AL++TL  LN++Y+D YLIHWP A
Sbjct: 80  WVTSKLWCNAHRAGLVPLALEKTLQDLNLEYIDAYLIHWPFA 121


>SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde
           reductase AKR3C2|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 284

 Score = 82.2 bits (194), Expect = 1e-16
 Identities = 50/111 (45%), Positives = 67/111 (60%), Gaps = 6/111 (5%)
 Frame = +2

Query: 146 PLFGLGT--WKSKPGEVTQ----AVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGV 307
           P +G+GT  +K + GE+ +    +VK+A+  G+ HIDCA VYGNE+EVG A    +KE  
Sbjct: 13  PAYGVGTALFKKEKGEINRTIVDSVKNALAAGFIHIDCAEVYGNEEEVGVA----LKEAN 68

Query: 308 VTREDLFITSKLWNTFHRPXLVRGALQETLDXLNVQYLDLYLIHWPQAYKE 460
           V R  LFITSK+    H    +  AL E+L  L   YLDLYL+H P  + E
Sbjct: 69  VPRSKLFITSKV---MHNVDNIPEALNESLRKLGTDYLDLYLLHSPIPFYE 116


>SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 283

 Score = 71.7 bits (168), Expect = 1e-13
 Identities = 43/107 (40%), Positives = 57/107 (53%)
 Frame = +2

Query: 140 LFPLFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTRE 319
           + P  G G +  K  E    V  A+D GYRHID A VYGNE   G+AI    ++  V R 
Sbjct: 18  VIPRIGFGAFMLKYNECYGLVTQALDSGYRHIDTAAVYGNEDICGKAIVDWCEKNNVKRT 77

Query: 320 DLFITSKLWNTFHRPXLVRGALQETLDXLNVQYLDLYLIHWPQAYKE 460
           D+F+TSKL N        R A++ +L  L   Y+DL+LI  P   K+
Sbjct: 78  DIFLTSKLANCSDY-YSTRAAIRSSLHHLGT-YIDLFLIQSPAGGKK 122


>SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 275

 Score = 61.3 bits (142), Expect = 2e-10
 Identities = 33/100 (33%), Positives = 52/100 (52%)
 Frame = +2

Query: 146 PLFGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDL 325
           P F  G++     +   +V  A+  GYRHID A +Y NE + G AI   ++E    RED+
Sbjct: 15  PQFAYGSYMVNRTKCFDSVYAALQCGYRHIDSAQMYHNEADCGRAILKFMEETGTKREDI 74

Query: 326 FITSKLWNTFHRPXLVRGALQETLDXLNVQYLDLYLIHWP 445
           + TSKL N          ++  ++    + Y+DL+L+H P
Sbjct: 75  WFTSKL-NDLSGYKSTLSSIDASVKACGLGYIDLFLLHSP 113


>SPCC965.06 |||potassium channel subunit |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 344

 Score = 33.5 bits (73), Expect = 0.044
 Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 15/113 (13%)
 Frame = +2

Query: 152 FGLGTWKSKPGE------VTQAVKDAIDIGYRHIDCAYVYGN---EKEVGEAITS---KI 295
           F LG W +   E          +K A D+G    D A +Y N   E  +G+AI       
Sbjct: 28  FSLGGWLTYGNEGYDVEHTKNCLKQAWDLGINTFDTAEIYSNGNSETVMGKAIKELGWDR 87

Query: 296 KEGVVTREDLF-ITSKLWNT--FHRPXLVRGALQETLDXLNVQYLDLYLIHWP 445
            E V+T +  F   +KL NT    R  ++ G L  +L  L + Y+D+ + H P
Sbjct: 88  SEYVITTKVFFGAGTKLPNTTGLSRKHIIEG-LNASLKRLGLPYVDVIMAHRP 139


>SPAC3G9.14 |sak1||transcriptional repressor
           Sak1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 766

 Score = 31.1 bits (67), Expect = 0.23
 Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
 Frame = +1

Query: 550 PLXXHXSGPQ-PPEXSHLSTRXPLPXGCCSXPNCXARVVPPXXXSFXP 690
           PL  H S    PP+ SH S   P P    S P   ++ +P    SF P
Sbjct: 275 PLPSHLSQSNVPPQLSHSSVPSPAPPRSVSQPTYFSQPMPQFSSSFVP 322


>SPAC11E3.14 |||conserved protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 588

 Score = 27.1 bits (57), Expect = 3.8
 Identities = 19/63 (30%), Positives = 25/63 (39%)
 Frame = +1

Query: 334 FETVEHVSSPXLGARCPAGDPGXSERSVLGSVPDTLAPGLQGRXLSLPDPTHXVKSSFSD 513
           F    H+  P +G R P   P   +  +       L   L G  L L D    VKS+FSD
Sbjct: 2   FNIKNHLRLPIIGKREPEEQPDPIDHDLH---VQRLRELLYGLDLMLDDDAQGVKSAFSD 58

Query: 514 XPI 522
             +
Sbjct: 59  DTV 61


>SPAC25A8.02 |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 390

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = +2

Query: 326 FITSKLWNTFHRPXLVRGALQETLDXLNVQYLDLYLIHW 442
           + + +    + R  L++  L E    L  + LD+Y +HW
Sbjct: 123 YFSKEYLTAYRRSELLQNKLHEYQKKLITRVLDMYQLHW 161


>SPAC9E9.17c |||dubiuos|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 72

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = -3

Query: 337 RSYEQIFPRYDSFLNFAGYSFSDFLLVSVNIGTVDVSVANVN 212
           RS E    + D  LN    +F+DF   ++N+G + +S    N
Sbjct: 29  RSREFSVIQKDEELNVLEINFNDFYRTTLNVGELSMSTRKTN 70


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,917,638
Number of Sequences: 5004
Number of extensions: 53250
Number of successful extensions: 136
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 132
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 473333082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)