Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_L11
         (891 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0202 - 1638978-1639571                                           71   9e-13
02_01_0158 - 1103461-1104186                                           67   2e-11

>08_01_0202 - 1638978-1639571
          Length = 197

 Score = 71.3 bits (167), Expect = 9e-13
 Identities = 35/76 (46%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
 Frame = +2

Query: 242 AEKVSGTVKWFNVKSGYGFINRNDTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFAVVA 421
           +E+V GTVKWF+   G+GFI  +D  ED+FVHQ+++  +      RS+ DG+ VEF+V +
Sbjct: 3   SERVKGTVKWFDATKGFGFITPDDGGEDLFVHQSSLKSD----GYRSLNDGDVVEFSVGS 58

Query: 422 GEKG-FEAAGVTXPGG 466
           G  G  +A  VT PGG
Sbjct: 59  GNDGRTKAVDVTAPGG 74


>02_01_0158 - 1103461-1104186
          Length = 241

 Score = 67.3 bits (157), Expect = 2e-11
 Identities = 37/80 (46%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
 Frame = +2

Query: 242 AEKVSGTVKWFNVKSGYGFINRNDTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFAVVA 421
           A +  GTVKWFN   G+GFI+ +D  ED+FVHQ++I  +      RS+ +GE VEFA+  
Sbjct: 4   AARHRGTVKWFNDTKGFGFISPDDGSEDLFVHQSSIKAD----GFRSLAEGEQVEFAISE 59

Query: 422 GEKG-FEAAGVTXPGGEPVK 478
            E G  +A  VT P G  VK
Sbjct: 60  SEDGRTKAVDVTGPDGSFVK 79


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,299,941
Number of Sequences: 37544
Number of extensions: 295337
Number of successful extensions: 790
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 788
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)