Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_L11
(891 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M85234-1|AAA36569.1| 322|Homo sapiens nuclease sensitive elemen... 147 5e-35
M83234-1|AAA59949.1| 320|Homo sapiens DNA-binding protein protein. 147 5e-35
M24070-1|AAA35750.1| 364|Homo sapiens protein ( Human DNA-bindi... 147 5e-35
L28809-1|AAA20871.1| 324|Homo sapiens protein ( Homo sapiens db... 147 5e-35
BC106045-1|AAI06046.1| 324|Homo sapiens Y box binding protein 1... 147 5e-35
BC098435-1|AAH98435.1| 324|Homo sapiens Y box binding protein 1... 147 5e-35
BC090038-1|AAH90038.1| 324|Homo sapiens Y box binding protein 1... 147 5e-35
BC072014-1|AAH72014.1| 266|Homo sapiens YBX1 protein protein. 147 5e-35
BC071708-1|AAH71708.1| 324|Homo sapiens Y box binding protein 1... 147 5e-35
BC070084-1|AAH70084.1| 324|Homo sapiens Y box binding protein 1... 147 5e-35
BC065571-1|AAH65571.1| 324|Homo sapiens Y box binding protein 1... 147 5e-35
BC038384-1|AAH38384.1| 324|Homo sapiens Y box binding protein 1... 147 5e-35
BC018393-1|AAH18393.1| 267|Homo sapiens Unknown (protein for IM... 147 5e-35
BC015208-1|AAH15208.1| 324|Homo sapiens Y box binding protein 1... 147 5e-35
BC010430-1|AAH10430.1| 324|Homo sapiens Y box binding protein 1... 147 5e-35
BC002411-1|AAH02411.1| 324|Homo sapiens Y box binding protein 1... 147 5e-35
BC000064-1|AAH00064.1| 266|Homo sapiens YBX1 protein protein. 147 5e-35
J03827-1|AAA61308.1| 317|Homo sapiens NFYA protein. 146 7e-35
X95325-1|CAA64631.1| 372|Homo sapiens DNA-binding protein protein. 145 2e-34
X72712-1|CAA51261.1| 372|Homo sapiens cold shock domain protein... 145 2e-34
M24069-1|AAA35749.1| 412|Homo sapiens protein ( Human DNA-bindi... 145 2e-34
L29071-1|AAA79243.1| 342|Homo sapiens DNA-binding protein A pro... 145 2e-34
BC021926-1|AAH21926.1| 372|Homo sapiens cold shock domain prote... 145 2e-34
BC015913-1|AAH15913.1| 303|Homo sapiens CSDA protein protein. 145 2e-34
BC015564-1|AAH15564.1| 372|Homo sapiens cold shock domain prote... 145 2e-34
BC008801-1|AAH08801.1| 372|Homo sapiens cold shock domain prote... 145 2e-34
AB209896-1|BAD93133.1| 134|Homo sapiens CSDA protein variant pr... 145 2e-34
BC009744-1|AAH09744.1| 303|Homo sapiens CSDA protein protein. 144 5e-34
DQ120685-1|ABB92460.1| 319|Homo sapiens rcNSEP1 protein. 138 2e-32
BC047760-1|AAH47760.1| 364|Homo sapiens Y box binding protein 2... 138 3e-32
BC033800-1|AAH33800.1| 364|Homo sapiens Y box binding protein 2... 138 3e-32
AF096834-1|AAD30662.1| 364|Homo sapiens germ cell specific Y-bo... 138 3e-32
AB208818-1|BAD92055.1| 268|Homo sapiens germ cell specific Y-bo... 81 7e-15
Z95329-1|CAI21661.2| 250|Homo sapiens lin-28 homolog B (C. eleg... 60 1e-08
DQ127228-1|AAZ38897.1| 250|Homo sapiens LIN28B protein. 60 1e-08
BC150538-1|AAI50539.1| 227|Homo sapiens Unknown (protein for IM... 60 1e-08
BC150537-1|AAI50538.1| 227|Homo sapiens Unknown (protein for IM... 60 1e-08
BC141960-1|AAI41961.1| 227|Homo sapiens LIN28B protein protein. 60 1e-08
BC127713-1|AAI27714.1| 227|Homo sapiens LIN28B protein protein. 60 1e-08
BC127712-1|AAI27713.1| 227|Homo sapiens LIN28B protein protein. 60 1e-08
AL135911-2|CAI20969.2| 250|Homo sapiens lin-28 homolog B (C. el... 60 1e-08
AK131411-1|BAD18558.1| 250|Homo sapiens protein ( Homo sapiens ... 60 1e-08
BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein. 57 7e-08
AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C. ele... 57 7e-08
AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens ... 57 7e-08
AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN... 57 7e-08
AF417846-1|AAM46639.1| 143|Homo sapiens immunoglobulin heavy ch... 32 3.2
CR456457-1|CAG30343.1| 153|Homo sapiens dJ347H13.2 protein. 30 9.8
BC067113-1|AAH67113.1| 153|Homo sapiens CSDC2 protein protein. 30 9.8
AL023553-5|CAB46024.1| 153|Homo sapiens protein ( hondrial acon... 30 9.8
AB027011-1|BAA84704.1| 153|Homo sapiens RNA-binding protein PIP... 30 9.8
>M85234-1|AAA36569.1| 322|Homo sapiens nuclease sensitive element
binding protein-1 protein.
Length = 322
Score = 147 bits (356), Expect = 5e-35
Identities = 73/103 (70%), Positives = 82/103 (79%)
Frame = +2
Query: 236 VIAEKVSGTVKWFNVKSGYGFINRNDTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFAV 415
VIA KV GTVKWFNV++GYGFINRNDT EDVFVHQTAI NNPRK +RSVGDGE VEF V
Sbjct: 53 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 112
Query: 416 VAGEKGFEAAGVTXPGGEPVKRSPYAADKXXGYHRQYFPXQXG 544
V GEKG EAA VT PGG PV+ S YAAD+ ++R+Y P + G
Sbjct: 113 VEGEKGAEAANVTGPGGVPVQGSKYAADR--NHYRRY-PRRRG 152
>M83234-1|AAA59949.1| 320|Homo sapiens DNA-binding protein protein.
Length = 320
Score = 147 bits (356), Expect = 5e-35
Identities = 73/103 (70%), Positives = 82/103 (79%)
Frame = +2
Query: 236 VIAEKVSGTVKWFNVKSGYGFINRNDTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFAV 415
VIA KV GTVKWFNV++GYGFINRNDT EDVFVHQTAI NNPRK +RSVGDGE VEF V
Sbjct: 51 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 110
Query: 416 VAGEKGFEAAGVTXPGGEPVKRSPYAADKXXGYHRQYFPXQXG 544
V GEKG EAA VT PGG PV+ S YAAD+ ++R+Y P + G
Sbjct: 111 VEGEKGAEAANVTGPGGVPVQGSKYAADR--NHYRRY-PRRRG 150
>M24070-1|AAA35750.1| 364|Homo sapiens protein ( Human DNA-binding
protein B (dbpB) gene, 3' end. ).
Length = 364
Score = 147 bits (356), Expect = 5e-35
Identities = 73/103 (70%), Positives = 82/103 (79%)
Frame = +2
Query: 236 VIAEKVSGTVKWFNVKSGYGFINRNDTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFAV 415
VIA KV GTVKWFNV++GYGFINRNDT EDVFVHQTAI NNPRK +RSVGDGE VEF V
Sbjct: 94 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 153
Query: 416 VAGEKGFEAAGVTXPGGEPVKRSPYAADKXXGYHRQYFPXQXG 544
V GEKG EAA VT PGG PV+ S YAAD+ ++R+Y P + G
Sbjct: 154 VEGEKGAEAANVTGPGGVPVQGSKYAADR--NHYRRY-PRRRG 193
>L28809-1|AAA20871.1| 324|Homo sapiens protein ( Homo sapiens
dbpB-like protein mRNA, complete cds. ).
Length = 324
Score = 147 bits (356), Expect = 5e-35
Identities = 73/103 (70%), Positives = 82/103 (79%)
Frame = +2
Query: 236 VIAEKVSGTVKWFNVKSGYGFINRNDTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFAV 415
VIA KV GTVKWFNV++GYGFINRNDT EDVFVHQTAI NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 416 VAGEKGFEAAGVTXPGGEPVKRSPYAADKXXGYHRQYFPXQXG 544
V GEKG EAA VT PGG PV+ S YAAD+ ++R+Y P + G
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAADR--NHYRRY-PRRRG 153
>BC106045-1|AAI06046.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 147 bits (356), Expect = 5e-35
Identities = 73/103 (70%), Positives = 82/103 (79%)
Frame = +2
Query: 236 VIAEKVSGTVKWFNVKSGYGFINRNDTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFAV 415
VIA KV GTVKWFNV++GYGFINRNDT EDVFVHQTAI NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 416 VAGEKGFEAAGVTXPGGEPVKRSPYAADKXXGYHRQYFPXQXG 544
V GEKG EAA VT PGG PV+ S YAAD+ ++R+Y P + G
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAADR--NHYRRY-PRRRG 153
>BC098435-1|AAH98435.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 147 bits (356), Expect = 5e-35
Identities = 73/103 (70%), Positives = 82/103 (79%)
Frame = +2
Query: 236 VIAEKVSGTVKWFNVKSGYGFINRNDTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFAV 415
VIA KV GTVKWFNV++GYGFINRNDT EDVFVHQTAI NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 416 VAGEKGFEAAGVTXPGGEPVKRSPYAADKXXGYHRQYFPXQXG 544
V GEKG EAA VT PGG PV+ S YAAD+ ++R+Y P + G
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAADR--NHYRRY-PRRRG 153
>BC090038-1|AAH90038.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 147 bits (356), Expect = 5e-35
Identities = 73/103 (70%), Positives = 82/103 (79%)
Frame = +2
Query: 236 VIAEKVSGTVKWFNVKSGYGFINRNDTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFAV 415
VIA KV GTVKWFNV++GYGFINRNDT EDVFVHQTAI NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 416 VAGEKGFEAAGVTXPGGEPVKRSPYAADKXXGYHRQYFPXQXG 544
V GEKG EAA VT PGG PV+ S YAAD+ ++R+Y P + G
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAADR--NHYRRY-PRRRG 153
>BC072014-1|AAH72014.1| 266|Homo sapiens YBX1 protein protein.
Length = 266
Score = 147 bits (356), Expect = 5e-35
Identities = 73/103 (70%), Positives = 82/103 (79%)
Frame = +2
Query: 236 VIAEKVSGTVKWFNVKSGYGFINRNDTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFAV 415
VIA KV GTVKWFNV++GYGFINRNDT EDVFVHQTAI NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 416 VAGEKGFEAAGVTXPGGEPVKRSPYAADKXXGYHRQYFPXQXG 544
V GEKG EAA VT PGG PV+ S YAAD+ ++R+Y P + G
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAADR--NHYRRY-PRRRG 153
>BC071708-1|AAH71708.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 147 bits (356), Expect = 5e-35
Identities = 73/103 (70%), Positives = 82/103 (79%)
Frame = +2
Query: 236 VIAEKVSGTVKWFNVKSGYGFINRNDTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFAV 415
VIA KV GTVKWFNV++GYGFINRNDT EDVFVHQTAI NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 416 VAGEKGFEAAGVTXPGGEPVKRSPYAADKXXGYHRQYFPXQXG 544
V GEKG EAA VT PGG PV+ S YAAD+ ++R+Y P + G
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAADR--NHYRRY-PRRRG 153
>BC070084-1|AAH70084.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 147 bits (356), Expect = 5e-35
Identities = 73/103 (70%), Positives = 82/103 (79%)
Frame = +2
Query: 236 VIAEKVSGTVKWFNVKSGYGFINRNDTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFAV 415
VIA KV GTVKWFNV++GYGFINRNDT EDVFVHQTAI NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 416 VAGEKGFEAAGVTXPGGEPVKRSPYAADKXXGYHRQYFPXQXG 544
V GEKG EAA VT PGG PV+ S YAAD+ ++R+Y P + G
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAADR--NHYRRY-PRRRG 153
>BC065571-1|AAH65571.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 147 bits (356), Expect = 5e-35
Identities = 73/103 (70%), Positives = 82/103 (79%)
Frame = +2
Query: 236 VIAEKVSGTVKWFNVKSGYGFINRNDTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFAV 415
VIA KV GTVKWFNV++GYGFINRNDT EDVFVHQTAI NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 416 VAGEKGFEAAGVTXPGGEPVKRSPYAADKXXGYHRQYFPXQXG 544
V GEKG EAA VT PGG PV+ S YAAD+ ++R+Y P + G
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAADR--NHYRRY-PRRRG 153
>BC038384-1|AAH38384.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 147 bits (356), Expect = 5e-35
Identities = 73/103 (70%), Positives = 82/103 (79%)
Frame = +2
Query: 236 VIAEKVSGTVKWFNVKSGYGFINRNDTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFAV 415
VIA KV GTVKWFNV++GYGFINRNDT EDVFVHQTAI NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 416 VAGEKGFEAAGVTXPGGEPVKRSPYAADKXXGYHRQYFPXQXG 544
V GEKG EAA VT PGG PV+ S YAAD+ ++R+Y P + G
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAADR--NHYRRY-PRRRG 153
>BC018393-1|AAH18393.1| 267|Homo sapiens Unknown (protein for
IMAGE:3882730) protein.
Length = 267
Score = 147 bits (356), Expect = 5e-35
Identities = 73/103 (70%), Positives = 82/103 (79%)
Frame = +2
Query: 236 VIAEKVSGTVKWFNVKSGYGFINRNDTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFAV 415
VIA KV GTVKWFNV++GYGFINRNDT EDVFVHQTAI NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 416 VAGEKGFEAAGVTXPGGEPVKRSPYAADKXXGYHRQYFPXQXG 544
V GEKG EAA VT PGG PV+ S YAAD+ ++R+Y P + G
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAADR--NHYRRY-PRRRG 153
>BC015208-1|AAH15208.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 147 bits (356), Expect = 5e-35
Identities = 73/103 (70%), Positives = 82/103 (79%)
Frame = +2
Query: 236 VIAEKVSGTVKWFNVKSGYGFINRNDTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFAV 415
VIA KV GTVKWFNV++GYGFINRNDT EDVFVHQTAI NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 416 VAGEKGFEAAGVTXPGGEPVKRSPYAADKXXGYHRQYFPXQXG 544
V GEKG EAA VT PGG PV+ S YAAD+ ++R+Y P + G
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAADR--NHYRRY-PRRRG 153
>BC010430-1|AAH10430.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 147 bits (356), Expect = 5e-35
Identities = 73/103 (70%), Positives = 82/103 (79%)
Frame = +2
Query: 236 VIAEKVSGTVKWFNVKSGYGFINRNDTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFAV 415
VIA KV GTVKWFNV++GYGFINRNDT EDVFVHQTAI NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 416 VAGEKGFEAAGVTXPGGEPVKRSPYAADKXXGYHRQYFPXQXG 544
V GEKG EAA VT PGG PV+ S YAAD+ ++R+Y P + G
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAADR--NHYRRY-PRRRG 153
>BC002411-1|AAH02411.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 147 bits (356), Expect = 5e-35
Identities = 73/103 (70%), Positives = 82/103 (79%)
Frame = +2
Query: 236 VIAEKVSGTVKWFNVKSGYGFINRNDTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFAV 415
VIA KV GTVKWFNV++GYGFINRNDT EDVFVHQTAI NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 416 VAGEKGFEAAGVTXPGGEPVKRSPYAADKXXGYHRQYFPXQXG 544
V GEKG EAA VT PGG PV+ S YAAD+ ++R+Y P + G
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAADR--NHYRRY-PRRRG 153
>BC000064-1|AAH00064.1| 266|Homo sapiens YBX1 protein protein.
Length = 266
Score = 147 bits (356), Expect = 5e-35
Identities = 73/103 (70%), Positives = 82/103 (79%)
Frame = +2
Query: 236 VIAEKVSGTVKWFNVKSGYGFINRNDTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFAV 415
VIA KV GTVKWFNV++GYGFINRNDT EDVFVHQTAI NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 416 VAGEKGFEAAGVTXPGGEPVKRSPYAADKXXGYHRQYFPXQXG 544
V GEKG EAA VT PGG PV+ S YAAD+ ++R+Y P + G
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAADR--NHYRRY-PRRRG 153
>J03827-1|AAA61308.1| 317|Homo sapiens NFYA protein.
Length = 317
Score = 146 bits (355), Expect = 7e-35
Identities = 73/103 (70%), Positives = 82/103 (79%)
Frame = +2
Query: 236 VIAEKVSGTVKWFNVKSGYGFINRNDTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFAV 415
VIA KV GTVKWFNV++GYGFINRNDT EDVFVHQTAI NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 416 VAGEKGFEAAGVTXPGGEPVKRSPYAADKXXGYHRQYFPXQXG 544
V GEKG EAA VT PGG PV+ S YAAD+ ++R+Y P + G
Sbjct: 114 VEGEKGEEAANVTGPGGVPVQGSKYAADR--NHYRRY-PRRRG 153
>X95325-1|CAA64631.1| 372|Homo sapiens DNA-binding protein protein.
Length = 372
Score = 145 bits (351), Expect = 2e-34
Identities = 71/103 (68%), Positives = 79/103 (76%)
Frame = +2
Query: 236 VIAEKVSGTVKWFNVKSGYGFINRNDTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFAV 415
V+A KV GTVKWFNV++GYGFINRNDT EDVFVHQTAI NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 416 VAGEKGFEAAGVTXPGGEPVKRSPYAADKXXGYHRQYFPXQXG 544
V GEKG EAA VT P G PV+ S YAAD+ Y R Y+ + G
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRRG 187
>X72712-1|CAA51261.1| 372|Homo sapiens cold shock domain protein A
protein.
Length = 372
Score = 145 bits (351), Expect = 2e-34
Identities = 71/103 (68%), Positives = 79/103 (76%)
Frame = +2
Query: 236 VIAEKVSGTVKWFNVKSGYGFINRNDTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFAV 415
V+A KV GTVKWFNV++GYGFINRNDT EDVFVHQTAI NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 416 VAGEKGFEAAGVTXPGGEPVKRSPYAADKXXGYHRQYFPXQXG 544
V GEKG EAA VT P G PV+ S YAAD+ Y R Y+ + G
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRRG 187
>M24069-1|AAA35749.1| 412|Homo sapiens protein ( Human DNA-binding
protein A (dbpA) gene, 3' end. ).
Length = 412
Score = 145 bits (351), Expect = 2e-34
Identities = 71/103 (68%), Positives = 79/103 (76%)
Frame = +2
Query: 236 VIAEKVSGTVKWFNVKSGYGFINRNDTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFAV 415
V+A KV GTVKWFNV++GYGFINRNDT EDVFVHQTAI NNPRK +RSVGDGE VEF V
Sbjct: 156 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 215
Query: 416 VAGEKGFEAAGVTXPGGEPVKRSPYAADKXXGYHRQYFPXQXG 544
V GEKG EAA VT P G PV+ S YAAD+ Y R Y+ + G
Sbjct: 216 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRRG 257
>L29071-1|AAA79243.1| 342|Homo sapiens DNA-binding protein A
protein.
Length = 342
Score = 145 bits (351), Expect = 2e-34
Identities = 71/103 (68%), Positives = 79/103 (76%)
Frame = +2
Query: 236 VIAEKVSGTVKWFNVKSGYGFINRNDTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFAV 415
V+A KV GTVKWFNV++GYGFINRNDT EDVFVHQTAI NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 416 VAGEKGFEAAGVTXPGGEPVKRSPYAADKXXGYHRQYFPXQXG 544
V GEKG EAA VT P G PV+ S YAAD+ Y R Y+ + G
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRRG 187
>BC021926-1|AAH21926.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 145 bits (351), Expect = 2e-34
Identities = 71/103 (68%), Positives = 79/103 (76%)
Frame = +2
Query: 236 VIAEKVSGTVKWFNVKSGYGFINRNDTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFAV 415
V+A KV GTVKWFNV++GYGFINRNDT EDVFVHQTAI NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 416 VAGEKGFEAAGVTXPGGEPVKRSPYAADKXXGYHRQYFPXQXG 544
V GEKG EAA VT P G PV+ S YAAD+ Y R Y+ + G
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRRG 187
>BC015913-1|AAH15913.1| 303|Homo sapiens CSDA protein protein.
Length = 303
Score = 145 bits (351), Expect = 2e-34
Identities = 71/103 (68%), Positives = 79/103 (76%)
Frame = +2
Query: 236 VIAEKVSGTVKWFNVKSGYGFINRNDTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFAV 415
V+A KV GTVKWFNV++GYGFINRNDT EDVFVHQTAI NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 416 VAGEKGFEAAGVTXPGGEPVKRSPYAADKXXGYHRQYFPXQXG 544
V GEKG EAA VT P G PV+ S YAAD+ Y R Y+ + G
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRRG 187
>BC015564-1|AAH15564.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 145 bits (351), Expect = 2e-34
Identities = 71/103 (68%), Positives = 79/103 (76%)
Frame = +2
Query: 236 VIAEKVSGTVKWFNVKSGYGFINRNDTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFAV 415
V+A KV GTVKWFNV++GYGFINRNDT EDVFVHQTAI NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 416 VAGEKGFEAAGVTXPGGEPVKRSPYAADKXXGYHRQYFPXQXG 544
V GEKG EAA VT P G PV+ S YAAD+ Y R Y+ + G
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRRG 187
>BC008801-1|AAH08801.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 145 bits (351), Expect = 2e-34
Identities = 71/103 (68%), Positives = 79/103 (76%)
Frame = +2
Query: 236 VIAEKVSGTVKWFNVKSGYGFINRNDTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFAV 415
V+A KV GTVKWFNV++GYGFINRNDT EDVFVHQTAI NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 416 VAGEKGFEAAGVTXPGGEPVKRSPYAADKXXGYHRQYFPXQXG 544
V GEKG EAA VT P G PV+ S YAAD+ Y R Y+ + G
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRRG 187
>AB209896-1|BAD93133.1| 134|Homo sapiens CSDA protein variant
protein.
Length = 134
Score = 145 bits (351), Expect = 2e-34
Identities = 71/103 (68%), Positives = 79/103 (76%)
Frame = +2
Query: 236 VIAEKVSGTVKWFNVKSGYGFINRNDTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFAV 415
V+A KV GTVKWFNV++GYGFINRNDT EDVFVHQTAI NNPRK +RSVGDGE VEF V
Sbjct: 19 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 78
Query: 416 VAGEKGFEAAGVTXPGGEPVKRSPYAADKXXGYHRQYFPXQXG 544
V GEKG EAA VT P G PV+ S YAAD+ Y R Y+ + G
Sbjct: 79 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRRG 120
>BC009744-1|AAH09744.1| 303|Homo sapiens CSDA protein protein.
Length = 303
Score = 144 bits (348), Expect = 5e-34
Identities = 70/103 (67%), Positives = 79/103 (76%)
Frame = +2
Query: 236 VIAEKVSGTVKWFNVKSGYGFINRNDTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFAV 415
V+A KV GTVKWFNV++GYGFINRNDT EDVFVHQTAI NNPRK +RS+GDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSLGDGETVEFDV 145
Query: 416 VAGEKGFEAAGVTXPGGEPVKRSPYAADKXXGYHRQYFPXQXG 544
V GEKG EAA VT P G PV+ S YAAD+ Y R Y+ + G
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRRG 187
>DQ120685-1|ABB92460.1| 319|Homo sapiens rcNSEP1 protein.
Length = 319
Score = 138 bits (335), Expect = 2e-32
Identities = 67/97 (69%), Positives = 77/97 (79%)
Frame = +2
Query: 236 VIAEKVSGTVKWFNVKSGYGFINRNDTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFAV 415
VIA KV GTVKWFNV++GYGFI+RNDT EDVFVH TA NNPRK +RSVGDGE VEF V
Sbjct: 50 VIATKVLGTVKWFNVRNGYGFIHRNDTKEDVFVHHTAXKKNNPRKYLRSVGDGEXVEFDV 109
Query: 416 VAGEKGFEAAGVTXPGGEPVKRSPYAADKXXGYHRQY 526
V GEKG +AA VT PGG PV+ S YAAD+ ++R+Y
Sbjct: 110 VEGEKGAKAANVTGPGGVPVQGSKYAADR--NHYRRY 144
>BC047760-1|AAH47760.1| 364|Homo sapiens Y box binding protein 2
protein.
Length = 364
Score = 138 bits (333), Expect = 3e-32
Identities = 67/99 (67%), Positives = 76/99 (76%)
Frame = +2
Query: 236 VIAEKVSGTVKWFNVKSGYGFINRNDTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFAV 415
V+A +V GTVKWFNV++GYGFINRNDT EDVFVHQTAI NNPRK +RSVGDGE VEF V
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 148
Query: 416 VAGEKGFEAAGVTXPGGEPVKRSPYAADKXXGYHRQYFP 532
V GEKG EA VT PGG PVK S YA ++ R++ P
Sbjct: 149 VEGEKGAEATNVTGPGGVPVKGSRYAPNRRKS--RRFIP 185
>BC033800-1|AAH33800.1| 364|Homo sapiens Y box binding protein 2
protein.
Length = 364
Score = 138 bits (333), Expect = 3e-32
Identities = 67/99 (67%), Positives = 76/99 (76%)
Frame = +2
Query: 236 VIAEKVSGTVKWFNVKSGYGFINRNDTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFAV 415
V+A +V GTVKWFNV++GYGFINRNDT EDVFVHQTAI NNPRK +RSVGDGE VEF V
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 148
Query: 416 VAGEKGFEAAGVTXPGGEPVKRSPYAADKXXGYHRQYFP 532
V GEKG EA VT PGG PVK S YA ++ R++ P
Sbjct: 149 VEGEKGAEATNVTGPGGVPVKGSRYAPNRRKS--RRFIP 185
>AF096834-1|AAD30662.1| 364|Homo sapiens germ cell specific Y-box
binding protein protein.
Length = 364
Score = 138 bits (333), Expect = 3e-32
Identities = 67/99 (67%), Positives = 76/99 (76%)
Frame = +2
Query: 236 VIAEKVSGTVKWFNVKSGYGFINRNDTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFAV 415
V+A +V GTVKWFNV++GYGFINRNDT EDVFVHQTAI NNPRK +RSVGDGE VEF V
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 148
Query: 416 VAGEKGFEAAGVTXPGGEPVKRSPYAADKXXGYHRQYFP 532
V GEKG EA VT PGG PVK S YA ++ R++ P
Sbjct: 149 VEGEKGAEATNVTGPGGVPVKGSRYAPNRRKS--RRFIP 185
>AB208818-1|BAD92055.1| 268|Homo sapiens germ cell specific Y-box
binding protein variant protein.
Length = 268
Score = 80.6 bits (190), Expect = 7e-15
Identities = 41/69 (59%), Positives = 48/69 (69%)
Frame = +2
Query: 326 VFVHQTAIXXNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTXPGGEPVKRSPYAADKX 505
+F +QTAI NNPRK +RSVGDGE VEF VV GEKG EA VT PGG PVK S YA ++
Sbjct: 23 LFPNQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYAPNRR 82
Query: 506 XGYHRQYFP 532
R++ P
Sbjct: 83 KS--RRFIP 89
>Z95329-1|CAI21661.2| 250|Homo sapiens lin-28 homolog B (C.
elegans) protein.
Length = 250
Score = 59.7 bits (138), Expect = 1e-08
Identities = 35/80 (43%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Frame = +2
Query: 254 SGTVKWFNVKSGYGFI---NRN----DTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFA 412
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 86
Query: 413 VVAGEKGFEAAGVTXPGGEP 472
KG E+ VT PGG P
Sbjct: 87 FKKSSKGLESIRVTGPGGSP 106
>DQ127228-1|AAZ38897.1| 250|Homo sapiens LIN28B protein.
Length = 250
Score = 59.7 bits (138), Expect = 1e-08
Identities = 35/80 (43%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Frame = +2
Query: 254 SGTVKWFNVKSGYGFI---NRN----DTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFA 412
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 86
Query: 413 VVAGEKGFEAAGVTXPGGEP 472
KG E+ VT PGG P
Sbjct: 87 FKKSSKGLESIRVTGPGGSP 106
>BC150538-1|AAI50539.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127315) protein.
Length = 227
Score = 59.7 bits (138), Expect = 1e-08
Identities = 35/80 (43%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Frame = +2
Query: 254 SGTVKWFNVKSGYGFI---NRN----DTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFA 412
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 63
Query: 413 VVAGEKGFEAAGVTXPGGEP 472
KG E+ VT PGG P
Sbjct: 64 FKKSSKGLESIRVTGPGGSP 83
>BC150537-1|AAI50538.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127314) protein.
Length = 227
Score = 59.7 bits (138), Expect = 1e-08
Identities = 35/80 (43%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Frame = +2
Query: 254 SGTVKWFNVKSGYGFI---NRN----DTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFA 412
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 63
Query: 413 VVAGEKGFEAAGVTXPGGEP 472
KG E+ VT PGG P
Sbjct: 64 FKKSSKGLESIRVTGPGGSP 83
>BC141960-1|AAI41961.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 59.7 bits (138), Expect = 1e-08
Identities = 35/80 (43%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Frame = +2
Query: 254 SGTVKWFNVKSGYGFI---NRN----DTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFA 412
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 63
Query: 413 VVAGEKGFEAAGVTXPGGEP 472
KG E+ VT PGG P
Sbjct: 64 FKKSSKGLESIRVTGPGGSP 83
>BC127713-1|AAI27714.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 59.7 bits (138), Expect = 1e-08
Identities = 35/80 (43%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Frame = +2
Query: 254 SGTVKWFNVKSGYGFI---NRN----DTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFA 412
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 63
Query: 413 VVAGEKGFEAAGVTXPGGEP 472
KG E+ VT PGG P
Sbjct: 64 FKKSSKGLESIRVTGPGGSP 83
>BC127712-1|AAI27713.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 59.7 bits (138), Expect = 1e-08
Identities = 35/80 (43%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Frame = +2
Query: 254 SGTVKWFNVKSGYGFI---NRN----DTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFA 412
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 63
Query: 413 VVAGEKGFEAAGVTXPGGEP 472
KG E+ VT PGG P
Sbjct: 64 FKKSSKGLESIRVTGPGGSP 83
>AL135911-2|CAI20969.2| 250|Homo sapiens lin-28 homolog B (C.
elegans) protein.
Length = 250
Score = 59.7 bits (138), Expect = 1e-08
Identities = 35/80 (43%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Frame = +2
Query: 254 SGTVKWFNVKSGYGFI---NRN----DTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFA 412
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 86
Query: 413 VVAGEKGFEAAGVTXPGGEP 472
KG E+ VT PGG P
Sbjct: 87 FKKSSKGLESIRVTGPGGSP 106
>AK131411-1|BAD18558.1| 250|Homo sapiens protein ( Homo sapiens
cDNA FLJ16517 fis, clone NT2RI3007167. ).
Length = 250
Score = 59.7 bits (138), Expect = 1e-08
Identities = 35/80 (43%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Frame = +2
Query: 254 SGTVKWFNVKSGYGFI---NRN----DTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFA 412
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 86
Query: 413 VVAGEKGFEAAGVTXPGGEP 472
KG E+ VT PGG P
Sbjct: 87 FKKSSKGLESIRVTGPGGSP 106
>BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein.
Length = 209
Score = 57.2 bits (132), Expect = 7e-08
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Frame = +2
Query: 254 SGTVKWFNVKSGYGFINRN-------DTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFA 412
+G KWFNV+ G+GF++ D DVFVHQ+ + + RS+ +GEAVEF
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHM----EGFRSLKEGEAVEFT 96
Query: 413 VVAGEKGFEAAGVTXPGG 466
KG E+ VT PGG
Sbjct: 97 FKKSAKGLESIRVTGPGG 114
>AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C.
elegans) protein.
Length = 209
Score = 57.2 bits (132), Expect = 7e-08
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Frame = +2
Query: 254 SGTVKWFNVKSGYGFINRN-------DTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFA 412
+G KWFNV+ G+GF++ D DVFVHQ+ + + RS+ +GEAVEF
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHM----EGFRSLKEGEAVEFT 96
Query: 413 VVAGEKGFEAAGVTXPGG 466
KG E+ VT PGG
Sbjct: 97 FKKSAKGLESIRVTGPGG 114
>AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens
cDNA FLJ12457 fis, clone NT2RM1000666, weakly similar to
DNA-BINDING PROTEIN A. ).
Length = 209
Score = 57.2 bits (132), Expect = 7e-08
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Frame = +2
Query: 254 SGTVKWFNVKSGYGFINRN-------DTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFA 412
+G KWFNV+ G+GF++ D DVFVHQ+ + + RS+ +GEAVEF
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHM----EGFRSLKEGEAVEFT 96
Query: 413 VVAGEKGFEAAGVTXPGG 466
KG E+ VT PGG
Sbjct: 97 FKKSAKGLESIRVTGPGG 114
>AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN-28
protein.
Length = 209
Score = 57.2 bits (132), Expect = 7e-08
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Frame = +2
Query: 254 SGTVKWFNVKSGYGFINRN-------DTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFA 412
+G KWFNV+ G+GF++ D DVFVHQ+ + + RS+ +GEAVEF
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHM----EGFRSLKEGEAVEFT 96
Query: 413 VVAGEKGFEAAGVTXPGG 466
KG E+ VT PGG
Sbjct: 97 FKKSAKGLESIRVTGPGG 114
>AF417846-1|AAM46639.1| 143|Homo sapiens immunoglobulin heavy chain
protein.
Length = 143
Score = 31.9 bits (69), Expect = 3.2
Identities = 21/48 (43%), Positives = 22/48 (45%)
Frame = +3
Query: 282 RVDMVSSTGMTPXKMCLCIRLPSPXTTHVRLCARSATERRWSLPWLPG 425
RV M S T +T M L L S T V CAR R W PW PG
Sbjct: 86 RVAMTSDTSVTTAYMELT-SLTSDDTA-VYFCARGDVNRNWLDPWGPG 131
>CR456457-1|CAG30343.1| 153|Homo sapiens dJ347H13.2 protein.
Length = 153
Score = 30.3 bits (65), Expect = 9.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 257 GTVKWFNVKSGYGFINRNDTXEDVFVHQTAI 349
G K F+ G+GFI + ED+FVH + I
Sbjct: 71 GVCKQFSRSQGHGFITPENGSEDIFVHVSDI 101
>BC067113-1|AAH67113.1| 153|Homo sapiens CSDC2 protein protein.
Length = 153
Score = 30.3 bits (65), Expect = 9.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 257 GTVKWFNVKSGYGFINRNDTXEDVFVHQTAI 349
G K F+ G+GFI + ED+FVH + I
Sbjct: 71 GVCKQFSRSQGHGFITPENGSEDIFVHVSDI 101
>AL023553-5|CAB46024.1| 153|Homo sapiens protein ( hondrial
aconitase 2, the gene Statin S).).
Length = 153
Score = 30.3 bits (65), Expect = 9.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 257 GTVKWFNVKSGYGFINRNDTXEDVFVHQTAI 349
G K F+ G+GFI + ED+FVH + I
Sbjct: 71 GVCKQFSRSQGHGFITPENGSEDIFVHVSDI 101
>AB027011-1|BAA84704.1| 153|Homo sapiens RNA-binding protein PIPPin
protein.
Length = 153
Score = 30.3 bits (65), Expect = 9.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 257 GTVKWFNVKSGYGFINRNDTXEDVFVHQTAI 349
G K F+ G+GFI + ED+FVH + I
Sbjct: 71 GVCKQFSRSQGHGFITPENGSEDIFVHVSDI 101
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,468,497
Number of Sequences: 237096
Number of extensions: 1646082
Number of successful extensions: 4451
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 4296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4426
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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