Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_L11
         (891 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061440-1|AAL28988.1|  352|Drosophila melanogaster LD37574p pro...   150   3e-36
AE014296-2093|AAF49961.3|  352|Drosophila melanogaster CG5654-PA...   150   3e-36
U49120-1|AAB94634.1|  359|Drosophila melanogaster Y-box protein ...   146   5e-35
AY118360-1|AAM48389.1|  195|Drosophila melanogaster RE05342p pro...    58   1e-08
AF521096-1|AAM77748.1|  195|Drosophila melanogaster RNA-binding ...    58   1e-08
AE014296-983|AAF50758.2|  195|Drosophila melanogaster CG17334-PA...    58   1e-08
AY060441-1|AAL25480.1|  143|Drosophila melanogaster LD47312p pro...    33   0.70 
AE014296-2798|AAN11740.1|  143|Drosophila melanogaster CG9705-PB...    33   0.70 
AE014296-2797|AAF49414.1|  143|Drosophila melanogaster CG9705-PA...    33   0.70 
BT023525-1|AAY84925.1|  298|Drosophila melanogaster IP09948p pro...    29   6.5  
AE014298-1132|AAF46331.1|  301|Drosophila melanogaster CG17982-P...    29   6.5  

>AY061440-1|AAL28988.1|  352|Drosophila melanogaster LD37574p
           protein.
          Length = 352

 Score =  150 bits (363), Expect = 3e-36
 Identities = 71/93 (76%), Positives = 77/93 (82%)
 Frame = +2

Query: 236 VIAEKVSGTVKWFNVKSGYGFINRNDTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFAV 415
           VIA KV+GTVKWFNVKSGYGFINRNDT EDVFVHQ+AI  NNP+KAVRSVGDGE VEF V
Sbjct: 57  VIATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIARNNPKKAVRSVGDGEVVEFDV 116

Query: 416 VAGEKGFEAAGVTXPGGEPVKRSPYAADKXXGY 514
           V GEKG EAA VT P GEPV+ S +AADK   +
Sbjct: 117 VIGEKGNEAANVTGPSGEPVRGSQFAADKRRNF 149


>AE014296-2093|AAF49961.3|  352|Drosophila melanogaster CG5654-PA
           protein.
          Length = 352

 Score =  150 bits (363), Expect = 3e-36
 Identities = 71/93 (76%), Positives = 77/93 (82%)
 Frame = +2

Query: 236 VIAEKVSGTVKWFNVKSGYGFINRNDTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFAV 415
           VIA KV+GTVKWFNVKSGYGFINRNDT EDVFVHQ+AI  NNP+KAVRSVGDGE VEF V
Sbjct: 57  VIATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIARNNPKKAVRSVGDGEVVEFDV 116

Query: 416 VAGEKGFEAAGVTXPGGEPVKRSPYAADKXXGY 514
           V GEKG EAA VT P GEPV+ S +AADK   +
Sbjct: 117 VIGEKGNEAANVTGPSGEPVRGSQFAADKRRNF 149


>U49120-1|AAB94634.1|  359|Drosophila melanogaster Y-box protein
           protein.
          Length = 359

 Score =  146 bits (353), Expect = 5e-35
 Identities = 71/93 (76%), Positives = 77/93 (82%)
 Frame = +2

Query: 236 VIAEKVSGTVKWFNVKSGYGFINRNDTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFAV 415
           VIA KV+GTVKWFNVKSGYGFINRNDT EDVFVHQ+AI  NNP+KAVRSVGDGE VEF V
Sbjct: 58  VIATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIA-NNPKKAVRSVGDGEVVEFDV 116

Query: 416 VAGEKGFEAAGVTXPGGEPVKRSPYAADKXXGY 514
           V GEKG EAA VT P GEPV+ S +AADK   +
Sbjct: 117 VIGEKGNEAANVTGPSGEPVRGSQFAADKRRNF 149


>AY118360-1|AAM48389.1|  195|Drosophila melanogaster RE05342p
           protein.
          Length = 195

 Score = 58.4 bits (135), Expect = 1e-08
 Identities = 31/78 (39%), Positives = 42/78 (53%)
 Frame = +2

Query: 257 GTVKWFNVKSGYGFINRNDTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFAVVAGEKGF 436
           G  KWFNV  G+GF+  ND  ++VFVHQ+ I  +      RS+G+ E VEF      +G 
Sbjct: 41  GKCKWFNVAKGWGFLTPNDGGQEVFVHQSVIQMS----GFRSLGEQEEVEFECQRTSRGL 96

Query: 437 EAAGVTXPGGEPVKRSPY 490
           EA  V+   G   + S Y
Sbjct: 97  EATRVSSRHGGSCQGSTY 114


>AF521096-1|AAM77748.1|  195|Drosophila melanogaster RNA-binding
           protein LIN-28 protein.
          Length = 195

 Score = 58.4 bits (135), Expect = 1e-08
 Identities = 31/78 (39%), Positives = 42/78 (53%)
 Frame = +2

Query: 257 GTVKWFNVKSGYGFINRNDTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFAVVAGEKGF 436
           G  KWFNV  G+GF+  ND  ++VFVHQ+ I  +      RS+G+ E VEF      +G 
Sbjct: 41  GKCKWFNVAKGWGFLTPNDGGQEVFVHQSVIQMS----GFRSLGEQEEVEFECQRTSRGL 96

Query: 437 EAAGVTXPGGEPVKRSPY 490
           EA  V+   G   + S Y
Sbjct: 97  EATRVSSRHGGSCQGSTY 114


>AE014296-983|AAF50758.2|  195|Drosophila melanogaster CG17334-PA
           protein.
          Length = 195

 Score = 58.4 bits (135), Expect = 1e-08
 Identities = 31/78 (39%), Positives = 42/78 (53%)
 Frame = +2

Query: 257 GTVKWFNVKSGYGFINRNDTXEDVFVHQTAIXXNNPRKAVRSVGDGEAVEFAVVAGEKGF 436
           G  KWFNV  G+GF+  ND  ++VFVHQ+ I  +      RS+G+ E VEF      +G 
Sbjct: 41  GKCKWFNVAKGWGFLTPNDGGQEVFVHQSVIQMS----GFRSLGEQEEVEFECQRTSRGL 96

Query: 437 EAAGVTXPGGEPVKRSPY 490
           EA  V+   G   + S Y
Sbjct: 97  EATRVSSRHGGSCQGSTY 114


>AY060441-1|AAL25480.1|  143|Drosophila melanogaster LD47312p
           protein.
          Length = 143

 Score = 32.7 bits (71), Expect = 0.70
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +2

Query: 251 VSGTVKWFNVKSGYGFINRNDTXEDVFVHQTAI 349
           V+G VK F+   G+GFI  N   EDVF H + I
Sbjct: 55  VTGMVKSFSRTKGHGFITPNAGGEDVFCHVSDI 87


>AE014296-2798|AAN11740.1|  143|Drosophila melanogaster CG9705-PB,
           isoform B protein.
          Length = 143

 Score = 32.7 bits (71), Expect = 0.70
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +2

Query: 251 VSGTVKWFNVKSGYGFINRNDTXEDVFVHQTAI 349
           V+G VK F+   G+GFI  N   EDVF H + I
Sbjct: 55  VTGMVKSFSRTKGHGFITPNAGGEDVFCHVSDI 87


>AE014296-2797|AAF49414.1|  143|Drosophila melanogaster CG9705-PA,
           isoform A protein.
          Length = 143

 Score = 32.7 bits (71), Expect = 0.70
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +2

Query: 251 VSGTVKWFNVKSGYGFINRNDTXEDVFVHQTAI 349
           V+G VK F+   G+GFI  N   EDVF H + I
Sbjct: 55  VTGMVKSFSRTKGHGFITPNAGGEDVFCHVSDI 87


>BT023525-1|AAY84925.1|  298|Drosophila melanogaster IP09948p
           protein.
          Length = 298

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -2

Query: 125 TAMVAKMVKYSTTSPRCSPLFVVTSXKLKILRIPYSEXYKN 3
           T+ ++K+   S TSP   P F +   K+  LRIP  +   N
Sbjct: 19  TSDLSKLSSISGTSPEAMPKFTIPQLKIPQLRIPQLQLQTN 59


>AE014298-1132|AAF46331.1|  301|Drosophila melanogaster CG17982-PA
           protein.
          Length = 301

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -2

Query: 125 TAMVAKMVKYSTTSPRCSPLFVVTSXKLKILRIPYSEXYKN 3
           T+ ++K+   S TSP   P F +   K+  LRIP  +   N
Sbjct: 22  TSDLSKLSSISGTSPEAMPKFTIPQLKIPQLRIPQLQLQTN 62


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,105,550
Number of Sequences: 53049
Number of extensions: 461465
Number of successful extensions: 1379
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1378
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4352837424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)