Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_L10
(876 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 57 1e-08
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 57 1e-08
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 55 6e-08
U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical pr... 37 0.016
Z81547-3|CAB04461.1| 253|Caenorhabditis elegans Hypothetical pr... 28 7.6
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 57.2 bits (132), Expect = 1e-08
Identities = 52/185 (28%), Positives = 74/185 (40%), Gaps = 38/185 (20%)
Frame = +1
Query: 193 CYRNQRPVCGTDGKTYNNECLLD-CATRDDPGLRVRYQG-------PCSEGNVGF-PAC- 342
C N VCGTDGKTY NEC L A ++ + V +G PC + GF +C
Sbjct: 323 CTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDEAGSPCEKMECGFWGSCV 382
Query: 343 -------------HCDYDLNQVCGSDNHTYD-XXXXXXXXXXTNPGLSILYSGLCAXEV- 477
C+ + VC ++ T+D T + + + G C V
Sbjct: 383 VKPDRTAECECPNRCEDVMRPVCATNGETFDNECEMKKKSCETKSMIKVKHQGTCGIGVC 442
Query: 478 ------------KIVDGPSKYPSCTCTRXMXPVCGSDXITYNNDC-LLNCAXINDSRLGI 618
+VDG K +CT VCGSD TY+N+C L N A + + +
Sbjct: 443 ATFDSCKKPQVCVVVDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFV 502
Query: 619 QYYGA 633
+Y A
Sbjct: 503 KYNSA 507
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Frame = +1
Query: 154 QVIATLAYPPSC---ACYRNQRPVCGTDGKTYNNEC-LLDCATRDDPGLRVRYQGPC 312
QV + P C +C + VCG+DGKTY+NEC L + A + V+Y C
Sbjct: 452 QVCVVVDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSAC 508
Score = 37.5 bits (83), Expect = 0.012
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +1
Query: 505 PSCTCTRXMXPVCGSDXITYNNDCLLNCAXINDSR 609
P+C + P+CGSD I YNN C LN D R
Sbjct: 684 PTCNLSSNY-PICGSDGIVYNNQCHLNTISCRDQR 717
Score = 35.9 bits (79), Expect = 0.038
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +1
Query: 178 PPSCACYRNQ--RPVCGTDGKTYNNEC-LLDCATRDDPGLRVRYQGPCSE 318
P C Y + + VCGTDG TY++EC + A + ++G C E
Sbjct: 537 PDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSKFVMTAFEGKCDE 586
Score = 33.5 bits (73), Expect = 0.20
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 181 PSCACYRNQRPVCGTDGKTYNNECLLD-CATRDDPGLRV 294
P+C N P+CG+DG YNN+C L+ + RD + V
Sbjct: 684 PTCNLSSNY-PICGSDGIVYNNQCHLNTISCRDQREIHV 721
Score = 31.9 bits (69), Expect = 0.62
Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 10/56 (17%)
Frame = +1
Query: 463 CAXEVKIVDGPSKYPSCTCTRXMX----------PVCGSDXITYNNDCLLNCAXIN 600
C K V PS +P C C + VCGSD TY+N C L N
Sbjct: 845 CFHGAKCVPSPSSFPDCICPQSCNMNHLGIVANMTVCGSDGTTYSNLCELKMFACN 900
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 4/44 (9%)
Frame = +1
Query: 490 GPSKYPSCTC----TRXMXPVCGSDXITYNNDCLLNCAXINDSR 609
G + P C C T VCG+D TY N+C L A + +
Sbjct: 310 GVDRRPECKCSEQCTMNSAHVCGTDGKTYLNECFLKLAACKEQK 353
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 57.2 bits (132), Expect = 1e-08
Identities = 52/185 (28%), Positives = 74/185 (40%), Gaps = 38/185 (20%)
Frame = +1
Query: 193 CYRNQRPVCGTDGKTYNNECLLD-CATRDDPGLRVRYQG-------PCSEGNVGF-PAC- 342
C N VCGTDGKTY NEC L A ++ + V +G PC + GF +C
Sbjct: 331 CTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDEAGSPCEKMECGFWGSCV 390
Query: 343 -------------HCDYDLNQVCGSDNHTYD-XXXXXXXXXXTNPGLSILYSGLCAXEV- 477
C+ + VC ++ T+D T + + + G C V
Sbjct: 391 VKPDRTAECECPNRCEDVMRPVCATNGETFDNECEMKKKSCETKSMIKVKHQGTCGIGVC 450
Query: 478 ------------KIVDGPSKYPSCTCTRXMXPVCGSDXITYNNDC-LLNCAXINDSRLGI 618
+VDG K +CT VCGSD TY+N+C L N A + + +
Sbjct: 451 ATFDSCKKPQVCVVVDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFV 510
Query: 619 QYYGA 633
+Y A
Sbjct: 511 KYNSA 515
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Frame = +1
Query: 154 QVIATLAYPPSC---ACYRNQRPVCGTDGKTYNNEC-LLDCATRDDPGLRVRYQGPC 312
QV + P C +C + VCG+DGKTY+NEC L + A + V+Y C
Sbjct: 460 QVCVVVDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSAC 516
Score = 35.9 bits (79), Expect = 0.038
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +1
Query: 178 PPSCACYRNQ--RPVCGTDGKTYNNEC-LLDCATRDDPGLRVRYQGPCSE 318
P C Y + + VCGTDG TY++EC + A + ++G C E
Sbjct: 545 PDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSKFVMTAFEGKCDE 594
Score = 31.5 bits (68), Expect = 0.82
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 10/50 (20%)
Frame = +1
Query: 463 CAXEVKIVDGPSKYPSCTCTRXMX----------PVCGSDXITYNNDCLL 582
C K V PS +P C C + VCGSD TY+N C L
Sbjct: 784 CFHGAKCVPSPSSFPDCICPQSCNMNHLGIVANMTVCGSDGTTYSNLCEL 833
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 4/44 (9%)
Frame = +1
Query: 490 GPSKYPSCTC----TRXMXPVCGSDXITYNNDCLLNCAXINDSR 609
G + P C C T VCG+D TY N+C L A + +
Sbjct: 318 GVDRRPECKCSEQCTMNSAHVCGTDGKTYLNECFLKLAACKEQK 361
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
protein F29G6.1 protein.
Length = 1170
Score = 55.2 bits (127), Expect = 6e-08
Identities = 27/59 (45%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = +1
Query: 178 PPSCACYRNQRPVCGTDGKTYNNECLLDCATRDDPGLRVRYQGPCSE----GNVGFPAC 342
PP C C RPVCGTD TYNN C L C R + L Y G C + VG P C
Sbjct: 16 PPDCDCPSVIRPVCGTDNVTYNNLCFLRCVQRTNEDLLFFYNGTCCDKKECEKVGTPIC 74
Score = 46.0 bits (104), Expect = 4e-05
Identities = 20/52 (38%), Positives = 26/52 (50%)
Frame = +1
Query: 475 VKIVDGPSKYPSCTCTRXMXPVCGSDXITYNNDCLLNCAXINDSRLGIQYYG 630
+ + G S P C C + PVCG+D +TYNN C L C + L Y G
Sbjct: 7 ILLFTGFSPPPDCDCPSVIRPVCGTDNVTYNNLCFLRCVQRTNEDLLFFYNG 58
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/81 (28%), Positives = 33/81 (40%)
Frame = +1
Query: 334 PACHCDYDLNQVCGSDNHTYDXXXXXXXXXXTNPGLSILYSGLCAXEVKIVDGPSKYPSC 513
P C C + VCG+DN TY+ TN L Y+G C + +
Sbjct: 17 PDCDCPSVIRPVCGTDNVTYNNLCFLRCVQRTNEDLLFFYNGTCCDKKE----------- 65
Query: 514 TCTRXMXPVCGSDXITYNNDC 576
C + P+C + T+ NDC
Sbjct: 66 -CEKVGTPICDNFGETHINDC 85
Score = 39.9 bits (89), Expect = 0.002
Identities = 32/115 (27%), Positives = 44/115 (38%), Gaps = 7/115 (6%)
Frame = +1
Query: 193 CYRNQRPVCGTDGKTYNNECLLDCATRDDPGLRVRYQGPCSE---GNVGFPACHCDYDLN 363
C ++ P+C +D TY N C D L V ++G CSE PA + D +
Sbjct: 590 CTDDKHPICASDFSTYENLCQFRKQKCLDSELEVLFKGKCSECLDSPCALPAENSP-DES 648
Query: 364 QVCGSDNHTYDXXXXXXXXXXTNPG----LSILYSGLCAXEVKIVDGPSKYPSCT 516
VC D T G L++ Y G+C V+ D P CT
Sbjct: 649 FVCLEDQSTKSLCEYQMLSCIFERGYGVNLTVQYIGVCCPPVESCDTEKPDPVCT 703
Score = 39.1 bits (87), Expect = 0.004
Identities = 32/136 (23%), Positives = 50/136 (36%), Gaps = 2/136 (1%)
Frame = +1
Query: 184 SCACYRNQRPVCGTDGKTYNNECLL--DCATRDDPGLRVRYQGPCSEGNVGFPACHCDYD 357
S C + P+CGT+G T+ N C L + + + V Y G C + N C D
Sbjct: 769 SMECDNSYDPLCGTNGVTFTNACSLQKEICESANSTIEVAYTGMCCDTN-------CPSD 821
Query: 358 LNQVCGSDNHTYDXXXXXXXXXXTNPGLSILYSGLCAXEVKIVDGPSKYPSCTCTRXMXP 537
+ VC S T+ + + + V K + C + P
Sbjct: 822 FSPVCDSKGSTHQNICHFGVKRCI---AERTFGDVLTIDKFEVCNEVKECNNACPKEYSP 878
Query: 538 VCGSDXITYNNDCLLN 585
VC S+ N+C L+
Sbjct: 879 VCASNGQNIVNECELD 894
Score = 36.7 bits (81), Expect = 0.022
Identities = 31/93 (33%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
Frame = +1
Query: 211 PVCGTDGKTYNNECLLD---C--ATRDDPGLRVRYQGPCSEGNVGFPACHCDYDLNQVC- 372
PVC T+G T+ N CL+D C ++ ++V YQG C CD D VC
Sbjct: 931 PVCDTEGVTHANMCLMDQNACIQMKKNKKTIQVSYQGQCCNQ-------PCDEDKTPVCD 983
Query: 373 GSDNH--TYDXXXXXXXXXXTNPGLSILYSGLC 465
G+ H N LSI YSG C
Sbjct: 984 GTITHPNICRFRIAQCEAERVNKTLSIAYSGEC 1016
Score = 35.1 bits (77), Expect = 0.066
Identities = 25/112 (22%), Positives = 42/112 (37%), Gaps = 2/112 (1%)
Frame = +1
Query: 181 PSCACYRNQRPVCGTDGKTYNNECLLDCATRDDPGLRVRYQGPCSEGNVGFPACH--CDY 354
P C + +PVC + G + N C + + E + AC C
Sbjct: 533 PKPNCPTDGQPVCDSAGNLHGNLCEFTYSRCIAASKGHQIHIATEENCISKEACQMPCTD 592
Query: 355 DLNQVCGSDNHTYDXXXXXXXXXXTNPGLSILYSGLCAXEVKIVDGPSKYPS 510
D + +C SD TY+ + L +L+ G C+ + +D P P+
Sbjct: 593 DKHPICASDFSTYENLCQFRKQKCLDSELEVLFKGKCS---ECLDSPCALPA 641
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +1
Query: 517 CTRXMXPVCGSDXITYNNDCLLNCAXINDSRLGIQYYG 630
CT P+C SD TY N C DS L + + G
Sbjct: 590 CTDDKHPICASDFSTYENLCQFRKQKCLDSELEVLFKG 627
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Frame = +1
Query: 190 ACYRNQRPVCGTDGKT-------YNNECLLDCATRDDPGLRVRYQGPCSEGNVGFPACHC 348
+C + +PVC + G+T +N++C+ D + L + YQG C PA C
Sbjct: 1072 SCPKTGQPVCDSRGRTHDSLCHFHNSKCIFDKIHTQNTTLTLDYQGKCC------PA-GC 1124
Query: 349 DYDLNQVCGSDNHTY 393
+L+ +C + Y
Sbjct: 1125 TDELSVICDQHENIY 1139
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 5/72 (6%)
Frame = +1
Query: 193 CYRNQRPVCGTDGKTYNNEC---LLDCATRDDPGLRVR--YQGPCSEGNVGFPACHCDYD 357
C + P+C G+T+ N+C C + GL + + G CS + + ++D
Sbjct: 66 CEKVGTPICDNFGETHINDCHFAQFQCIMKKSMGLSLTKLHMGRCSSKDCNHNCTNTEFD 125
Query: 358 LNQVCGSDNHTY 393
VC ++ Y
Sbjct: 126 --PVCDTNGSVY 135
>U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical
protein ZK813.6 protein.
Length = 251
Score = 37.1 bits (82), Expect = 0.016
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +1
Query: 184 SCACYRNQRPVCGTDGK---TYNNECLLDCATRDDPGLRVRYQGPC 312
+C+C PVC +G TY+N+C+ CA + L + Y+G C
Sbjct: 24 TCSCKPEIDPVCVREGPYQYTYSNKCVFQCAQENKKDLVLLYEGSC 69
Score = 35.9 bits (79), Expect = 0.038
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +1
Query: 508 SCTCTRXMXPVC---GSDXITYNNDCLLNCAXINDSRLGIQYYGALX*XRY 651
+C+C + PVC G TY+N C+ CA N L + Y G+ RY
Sbjct: 24 TCSCKPEIDPVCVREGPYQYTYSNKCVFQCAQENKKDLVLLYEGSCCSARY 74
>Z81547-3|CAB04461.1| 253|Caenorhabditis elegans Hypothetical
protein F53F8.4 protein.
Length = 253
Score = 28.3 bits (60), Expect = 7.6
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 175 YPPSCACYRNQRPVCG 222
Y PSCA Y RP CG
Sbjct: 32 YQPSCAAYSQPRPSCG 47
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,268,856
Number of Sequences: 27780
Number of extensions: 327737
Number of successful extensions: 710
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 706
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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