Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_L08
         (869 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         30   0.080
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    26   1.7  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         25   3.0  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         25   3.0  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    23   9.2  

>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 30.3 bits (65), Expect = 0.080
 Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
 Frame = -2

Query: 430 HVXEFQHQHLVPVQRHR--LHFXGHVHEXQHQHLVPVHRHRLHFHVH 296
           H    QH HL  VQ+H   +H   H H   +Q       H  H H H
Sbjct: 119 HQHHHQHPHLPHVQQHHPSVHHPAH-HPLHYQPAAAAAMHHHHHHPH 164


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = -2

Query: 358 HEXQHQHLVPVHRHRLHFHVHEFQHQY 278
           H+ QH      H H  H H H  Q Q+
Sbjct: 173 HQQQHPGHSQHHHHHHHHHPHHSQQQH 199



 Score = 25.4 bits (53), Expect = 2.3
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = -2

Query: 415 QHQHLVPVQRHRLHFXGHVHEXQHQH 338
           Q QH    Q H  H   H H  Q QH
Sbjct: 174 QQQHPGHSQHHHHHHHHHPHHSQQQH 199


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -2

Query: 364 HVHEXQHQHLVPVHRHRLH 308
           H H+  H H +P H H  H
Sbjct: 93  HHHQHPHHHQLPHHPHHQH 111


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -2

Query: 364 HVHEXQHQHLVPVHRHRLH 308
           H H+  H H +P H H  H
Sbjct: 93  HHHQHPHHHQLPHHPHHQH 111


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = -2

Query: 412 HQHLVPVQRHRLHFXGHVHEXQHQHLVPVHRHRLH 308
           + +++  Q+ + H   H H+ Q QH    H H  H
Sbjct: 299 NNYILAQQQQQQHHH-HQHQPQQQHQQQYHSHPHH 332


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 389,460
Number of Sequences: 2352
Number of extensions: 5306
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93026475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)