Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_L07
         (822 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    24   1.7  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    23   2.9  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    22   6.8  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   8.9  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +3

Query: 648 IIRLILIFCYFXWYLTTIIAI 710
           +++L+ +FCYF  YL T+  I
Sbjct: 140 LLQLVFVFCYFI-YLFTVYYI 159


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 12/49 (24%), Positives = 26/49 (53%)
 Frame = -1

Query: 327 YL*EISSFILKVSSYSIKKEXKTAL*QSVRIDQCFPIKSIEVASKKNIV 181
           ++  + +  L +S  ++ +E KT L  + +I Q FP +   ++   N+V
Sbjct: 258 FMINVGTVTLILSCDAVLEEVKTTLLLAYKIRQVFPNEKKNISEFINVV 306


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +2

Query: 350 DRNEFLHINTTVPDLIRLHEN 412
           ++  + HI TT  + IR+H +
Sbjct: 132 EKQSYFHIATTSNEFIRVHHS 152


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 618 QTFINKFVRGFNSIKSSG 565
           QTF N  + GF  ++ SG
Sbjct: 118 QTFSNLNISGFGGVQESG 135


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,325
Number of Sequences: 336
Number of extensions: 2937
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22517873
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)