Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_L06
         (911 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    24   1.7  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   2.7  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    23   2.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   5.1  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   6.7  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   6.7  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    22   8.9  

>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +3

Query: 48  TPLCCSPVRISSALSLSTVHHGRQVRSSLRLH 143
           T L CS  R    LS+S +  GR +  S R+H
Sbjct: 628 TTLTCSVTRGDLPLSISWLKDGRAMGPSERVH 659


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +1

Query: 751  PPXPPPXPXXG 783
            PP PPP P  G
Sbjct: 1355 PPPPPPPPSSG 1365



 Score = 20.6 bits (41), Expect(2) = 2.7
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +1

Query: 736  PPPXPPP 756
            PPP PPP
Sbjct: 1355 PPPPPPP 1361



 Score = 20.6 bits (41), Expect(2) = 2.7
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +1

Query: 748  PPPXPPP 768
            PPP PPP
Sbjct: 1356 PPPPPPP 1362


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = +1

Query: 739 PPXPPPXPPPXPXXG 783
           PP P P PPP    G
Sbjct: 338 PPKPAPPPPPPSSSG 352



 Score = 22.6 bits (46), Expect = 5.1
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = +1

Query: 748 PPPXPPPXPXXGSRP 792
           P P PPP P   S P
Sbjct: 339 PKPAPPPPPPSSSGP 353



 Score = 22.6 bits (46), Expect = 5.1
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +1

Query: 736 PPPXPPPXPP 765
           P P PPP PP
Sbjct: 339 PKPAPPPPPP 348



 Score = 22.2 bits (45), Expect = 6.7
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +1

Query: 736 PPPXPPPXPPP 768
           PP   PP PPP
Sbjct: 338 PPKPAPPPPPP 348


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 7/17 (41%), Positives = 8/17 (47%)
 Frame = +3

Query: 807  PXXPXXLWHPPPXXXPP 857
            P  P   W+PPP    P
Sbjct: 1157 PFTPFNFWNPPPFMPSP 1173


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 168 HHRSLGQSDAGEENYELGGHDVL 100
           HH+    + AG +   L GH VL
Sbjct: 920 HHQIQVSTSAGLQTIRLSGHSVL 942


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +1

Query: 739 PPXPPPXPPPXPXXGSRP 792
           PP P   PPP    G+ P
Sbjct: 39  PPNPSQGPPPGGPPGAPP 56



 Score = 21.8 bits (44), Expect = 8.9
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +1

Query: 736 PPPXPPPXPPP 768
           PPP  PP  PP
Sbjct: 46  PPPGGPPGAPP 56


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 14/48 (29%), Positives = 15/48 (31%)
 Frame = +1

Query: 739 PPXPPPXPPPXPXXGSRPXAGLXXQXPVXFGIPXPXXHLLPXXXPAQP 882
           P   P   PP P     P A      PV    P P    L     A+P
Sbjct: 103 PVYIPQPRPPHPRLRREPEAEPGNNRPVYIPQPRPPHPRLRREPEAEP 150


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,751
Number of Sequences: 438
Number of extensions: 4642
Number of successful extensions: 18
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29630055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)