Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_K23
(955 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 34 0.13
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 1.2
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 31 1.2
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 31 1.2
AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (... 30 2.8
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 26 2.9
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 4.9
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 4.9
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 4.9
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 4.9
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 6.5
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 6.5
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 6.5
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 28 8.6
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 34.3 bits (75), Expect = 0.13
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +2
Query: 722 PPPXXPXXKKKXXXGGGGGGXXKXXXXPPPPPP 820
PPP + GGGGG PPPPPP
Sbjct: 70 PPPFDGGYNRPYGGGGGGGYGRPQGYVPPPPPP 102
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -1
Query: 817 GGGGGXXXXFXXPPPPPP 764
GGG G + PPPPPP
Sbjct: 86 GGGYGRPQGYVPPPPPPP 103
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 764 GGGGGGXXKXXXXPPPPPP 820
G GGGG PPPPPP
Sbjct: 41 GCGGGGGCGGGCAPPPPPP 59
Score = 28.7 bits (61), Expect(2) = 1.2
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 764 GGGGGGXXKXXXXPPPPPP 820
G GGGG PPPPPP
Sbjct: 98 GCGGGGGCGGGCAPPPPPP 116
Score = 21.0 bits (42), Expect(2) = 1.2
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +2
Query: 722 PPPXXPXXKKKXXXGGGGGG 781
PPP P GGGG G
Sbjct: 54 PPPPPPACGGGCGGGGGGCG 73
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 737 PXXKKKXXXGGGGGGXXKXXXXPPPPPP 820
P GGGGG PPPPPP
Sbjct: 41 PCSSSSYATGGGGGSYAAAPALPPPPPP 68
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 737 PXXKKKXXXGGGGGGXXKXXXXPPPPPP 820
P GGGGG PPPPPP
Sbjct: 41 PCSSSSYATGGGGGSYAAAPALPPPPPP 68
>AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (grd
related) protein19 protein.
Length = 157
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +2
Query: 764 GGGGGGXXKXXXXPPPPPPXXXXXXXXXXKKKK 862
G GGGG PPPPPP KK++
Sbjct: 32 GCGGGGGGGGCCAPPPPPPVCGGCGCGGRKKRE 64
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Frame = -1
Query: 859 FFFXXXXXXXXXXXG-GGGGXXXXFXXPPPPPP 764
FFF G GGGG PPPPPP
Sbjct: 18 FFFPRVTPNDGCGCGCGGGGGGGGCCAPPPPPP 50
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 25.8 bits (54), Expect(2) = 2.9
Identities = 12/22 (54%), Positives = 12/22 (54%), Gaps = 3/22 (13%)
Frame = +2
Query: 764 GGGGGGXXKXXXXP---PPPPP 820
GGGGGG P PPPPP
Sbjct: 24 GGGGGGGGCAPAAPACAPPPPP 45
Score = 22.6 bits (46), Expect(2) = 2.9
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = +2
Query: 803 PPPPPPXXXXXXXXXXKKKK 862
PPPPPP +KK+
Sbjct: 52 PPPPPPPPPMCGCGCGRKKR 71
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +2
Query: 719 PPPPXXPXXKKKXXXGGGGGGXXKXXXXPPPPPP 820
PPPP P GG PPPPPP
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP 747
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +2
Query: 719 PPPPXXPXXKKKXXXGGGGGGXXKXXXXPPPPPP 820
PPPP P GG PPPPPP
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP 747
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +2
Query: 719 PPPPXXPXXKKKXXXGGGGGGXXKXXXXPPPPPP 820
PPPP P GG PPPPPP
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP 330
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 3/36 (8%)
Frame = -2
Query: 582 PPPPPXGXXXFFF---FXKKKKXXPPXGXGGXFPPP 484
PPPPP G + ++ PP G G PPP
Sbjct: 199 PPPPPTGEPQDLSAEGYASRRPPPPPKGTGSPTPPP 234
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +2
Query: 719 PPPPXXPXXKKKXXXGGGGGGXXKXXXXPPPPPP 820
PPPP P GG + PPPPPP
Sbjct: 272 PPPP--PTGSPPPPPAGGSPPPPRAGSPPPPPPP 303
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +2
Query: 719 PPPPXXPXXKKKXXXGGGGGGXXKXXXXPPPPPP 820
PPPP P GG + PPPPPP
Sbjct: 293 PPPP--PTGSPPPPPAGGSPPPPRAGSPPPPPPP 324
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +2
Query: 719 PPPPXXPXXKKKXXXGGGGGGXXKXXXXPPPPPP 820
PPPP P GG + PPPPPP
Sbjct: 278 PPPP--PTGSPPPPPAGGSPPPPRAGSPPPPPPP 309
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +2
Query: 719 PPPPXXPXXKKKXXXGGGGGGXXKXXXXPPPPPP 820
PPPP P K G PPPPPP
Sbjct: 552 PPPPPLPLDLLKGAVAGLKSVPGGPPPPPPPPPP 585
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,511,365
Number of Sequences: 27780
Number of extensions: 308476
Number of successful extensions: 2378
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1898
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2475644248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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