Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_K16
         (894 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z11723-2|CAA77786.1|  811|Drosophila melanogaster DNA binding pr...    29   6.5  
Z11723-1|CAA77785.1|  813|Drosophila melanogaster DNA binding pr...    29   6.5  
BT025183-1|ABF00108.1|  487|Drosophila melanogaster IP15250p pro...    29   6.5  
AE014297-4783|AAN14282.1|  813|Drosophila melanogaster CG1856-PE...    29   6.5  
AE014297-4782|AAF57179.1|  813|Drosophila melanogaster CG1856-PB...    29   6.5  
AE014297-4781|AAF57180.1|  813|Drosophila melanogaster CG1856-PA...    29   6.5  

>Z11723-2|CAA77786.1|  811|Drosophila melanogaster DNA binding
           protein protein.
          Length = 811

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 27/86 (31%), Positives = 35/86 (40%)
 Frame = -2

Query: 290 PVXSXXGPXFXISLARVGPKRNXXPTXFPEXKDXKGFXMXIPPNVTSPX*YCGAPETXAX 111
           P  S  GP   ISL  +  +R   P   P     K   +    N T+P    G+P+T   
Sbjct: 313 PGGSSTGPSETISLLEISDERESAPVHLPTILGLKIRAI----NTTTPA-QQGSPQTPTK 367

Query: 110 SPHNXKAIILVERSNNSQSILTQILR 33
           S    +       SNNS S+L Q LR
Sbjct: 368 SKPKIRQ---ATGSNNSNSLLKQQLR 390


>Z11723-1|CAA77785.1|  813|Drosophila melanogaster DNA binding
           protein protein.
          Length = 813

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 27/86 (31%), Positives = 35/86 (40%)
 Frame = -2

Query: 290 PVXSXXGPXFXISLARVGPKRNXXPTXFPEXKDXKGFXMXIPPNVTSPX*YCGAPETXAX 111
           P  S  GP   ISL  +  +R   P   P     K   +    N T+P    G+P+T   
Sbjct: 315 PGGSSTGPSETISLLEISDERESAPVHLPTILGLKIRAI----NTTTPA-QQGSPQTPTK 369

Query: 110 SPHNXKAIILVERSNNSQSILTQILR 33
           S    +       SNNS S+L Q LR
Sbjct: 370 SKPKIRQ---ATGSNNSNSLLKQQLR 392


>BT025183-1|ABF00108.1|  487|Drosophila melanogaster IP15250p
           protein.
          Length = 487

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 27/86 (31%), Positives = 35/86 (40%)
 Frame = -2

Query: 290 PVXSXXGPXFXISLARVGPKRNXXPTXFPEXKDXKGFXMXIPPNVTSPX*YCGAPETXAX 111
           P  S  GP   ISL  +  +R   P   P     K   +    N T+P    G+P+T   
Sbjct: 315 PGGSSTGPSETISLLEISDERESAPVHLPTILGLKIRAI----NTTTPA-QQGSPQTPTK 369

Query: 110 SPHNXKAIILVERSNNSQSILTQILR 33
           S    +       SNNS S+L Q LR
Sbjct: 370 SKPKIRQ---ATGSNNSNSLLKQQLR 392


>AE014297-4783|AAN14282.1|  813|Drosophila melanogaster CG1856-PE,
           isoform E protein.
          Length = 813

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 27/86 (31%), Positives = 35/86 (40%)
 Frame = -2

Query: 290 PVXSXXGPXFXISLARVGPKRNXXPTXFPEXKDXKGFXMXIPPNVTSPX*YCGAPETXAX 111
           P  S  GP   ISL  +  +R   P   P     K   +    N T+P    G+P+T   
Sbjct: 315 PGGSSTGPSETISLLEISDERESAPVHLPTILGLKIRAI----NTTTPA-QQGSPQTPTK 369

Query: 110 SPHNXKAIILVERSNNSQSILTQILR 33
           S    +       SNNS S+L Q LR
Sbjct: 370 SKPKIRQ---ATGSNNSNSLLKQQLR 392


>AE014297-4782|AAF57179.1|  813|Drosophila melanogaster CG1856-PB,
           isoform B protein.
          Length = 813

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 27/86 (31%), Positives = 35/86 (40%)
 Frame = -2

Query: 290 PVXSXXGPXFXISLARVGPKRNXXPTXFPEXKDXKGFXMXIPPNVTSPX*YCGAPETXAX 111
           P  S  GP   ISL  +  +R   P   P     K   +    N T+P    G+P+T   
Sbjct: 315 PGGSSTGPSETISLLEISDERESAPVHLPTILGLKIRAI----NTTTPA-QQGSPQTPTK 369

Query: 110 SPHNXKAIILVERSNNSQSILTQILR 33
           S    +       SNNS S+L Q LR
Sbjct: 370 SKPKIRQ---ATGSNNSNSLLKQQLR 392


>AE014297-4781|AAF57180.1|  813|Drosophila melanogaster CG1856-PA,
           isoform A protein.
          Length = 813

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 27/86 (31%), Positives = 35/86 (40%)
 Frame = -2

Query: 290 PVXSXXGPXFXISLARVGPKRNXXPTXFPEXKDXKGFXMXIPPNVTSPX*YCGAPETXAX 111
           P  S  GP   ISL  +  +R   P   P     K   +    N T+P    G+P+T   
Sbjct: 315 PGGSSTGPSETISLLEISDERESAPVHLPTILGLKIRAI----NTTTPA-QQGSPQTPTK 369

Query: 110 SPHNXKAIILVERSNNSQSILTQILR 33
           S    +       SNNS S+L Q LR
Sbjct: 370 SKPKIRQ---ATGSNNSNSLLKQQLR 392


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,208,272
Number of Sequences: 53049
Number of extensions: 265636
Number of successful extensions: 419
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 419
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4341591036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)