Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_K13
(850 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.005
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 33 0.039
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.16
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 31 0.16
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.27
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.36
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 27 2.5
SPAC13G7.03 |||up-frameshift suppressor3 family|Schizosaccharomy... 27 3.4
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 27 4.4
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 4.4
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 27 4.4
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 4.4
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 27 4.4
SPAC11D3.08c |||amino acid permease, unknown 1|Schizosaccharomyc... 26 5.9
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 36.3 bits (80), Expect = 0.005
Identities = 19/47 (40%), Positives = 19/47 (40%), Gaps = 4/47 (8%)
Frame = +1
Query: 493 SPPPPPXXXKXQTPXXA----XPPPPXXXPPPPXPPXXXXAAXNXXP 621
SPPPPP TP A PP P PPP PP A P
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPP 777
Score = 30.7 bits (66), Expect = 0.27
Identities = 12/19 (63%), Positives = 12/19 (63%), Gaps = 2/19 (10%)
Frame = +2
Query: 677 PPPPPPPP--XXKXPPXPP 727
PPPPPPPP PP PP
Sbjct: 761 PPPPPPPPGVAGAGPPPPP 779
Score = 29.5 bits (63), Expect = 0.63
Identities = 14/38 (36%), Positives = 15/38 (39%), Gaps = 6/38 (15%)
Frame = +1
Query: 493 SPPPPPXXXKXQTPXXAXPPPPXXXP------PPPXPP 588
+P P P P PPPP P PPP PP
Sbjct: 743 TPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 29.1 bits (62), Expect = 0.83
Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 3/40 (7%)
Frame = +1
Query: 496 PPPPPXXXKXQTPXXAXPPPPXXX---PPPPXPPXXXXAA 606
P PPP P PPPP PPPP PP +A
Sbjct: 750 PVPPPAPIMGGPPPP--PPPPGVAGAGPPPPPPPPPAVSA 787
Score = 26.6 bits (56), Expect = 4.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 677 PPPPPPPP 700
PPPPPPPP
Sbjct: 775 PPPPPPPP 782
Score = 26.6 bits (56), Expect = 4.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 677 PPPPPPPP 700
PPPPPPPP
Sbjct: 776 PPPPPPPP 783
Score = 25.8 bits (54), Expect = 7.8
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +2
Query: 680 PPPPPPPXXKXPPXPP 727
P PPP P PP PP
Sbjct: 750 PVPPPAPIMGGPPPPP 765
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 33.5 bits (73), Expect = 0.039
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2
Query: 677 PPPPPPPPXXKXPPXPP 727
PPPPPPPP + P PP
Sbjct: 9 PPPPPPPPGFEPPSQPP 25
Score = 30.7 bits (66), Expect = 0.27
Identities = 12/20 (60%), Positives = 13/20 (65%), Gaps = 3/20 (15%)
Frame = +2
Query: 677 PPPPPPP---PXXKXPPXPP 727
PPPPPPP P + PP PP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPP 29
Score = 29.9 bits (64), Expect = 0.48
Identities = 12/20 (60%), Positives = 12/20 (60%), Gaps = 3/20 (15%)
Frame = +2
Query: 677 PPPPPP---PPXXKXPPXPP 727
PPPPPP PP PP PP
Sbjct: 11 PPPPPPGFEPPSQPPPPPPP 30
Score = 29.1 bits (62), Expect = 0.83
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 493 SPPPPPXXXKXQTPXXAXPPPP 558
+PPPPP + P PPPP
Sbjct: 8 NPPPPPPPPGFEPPSQPPPPPP 29
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.5 bits (68), Expect = 0.16
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Frame = +1
Query: 493 SPPPPPXXXKXQTPXXAXPPP--PXXXPPPPXPPXXXXAAXN 612
+P PPP P A P P P PPPP P + N
Sbjct: 1704 APTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPN 1745
Score = 29.5 bits (63), Expect = 0.63
Identities = 14/34 (41%), Positives = 14/34 (41%), Gaps = 2/34 (5%)
Frame = +1
Query: 493 SPPP--PPXXXKXQTPXXAXPPPPXXXPPPPXPP 588
S PP P Q PPPP PPPP P
Sbjct: 1688 STPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAP 1721
Score = 26.2 bits (55), Expect = 5.9
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +2
Query: 677 PPPPPPPPXXKXPPXPP 727
PPPP PP PP P
Sbjct: 1715 PPPPSAPPMPAGPPSAP 1731
Score = 25.8 bits (54), Expect = 7.8
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +2
Query: 677 PPPPPPPPXXKXPPXPP 727
P PPPPP PP P
Sbjct: 1705 PTPPPPPMSVPPPPSAP 1721
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 31.5 bits (68), Expect = 0.16
Identities = 27/86 (31%), Positives = 27/86 (31%), Gaps = 11/86 (12%)
Frame = +1
Query: 493 SPPP---PPXXXKXQT--PXXAXPPPPXXXPPPPXPPXXXXAAXNXXPXXXXXXXXXXXX 657
SPPP PP T P PPPP PPPP A N
Sbjct: 166 SPPPSFQPPSAAAPATSLPSDYNPPPP---PPPPPAVEDQAADANEPDDYYSSGRAVSPE 222
Query: 658 XXXXXXP------PXPPPPPXXKXPP 717
P P PPPPP PP
Sbjct: 223 IPPTYTPKQADPLPAPPPPPPPTLPP 248
Score = 26.6 bits (56), Expect = 4.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 677 PPPPPPPP 700
PPPPPPPP
Sbjct: 189 PPPPPPPP 196
Score = 26.6 bits (56), Expect = 4.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 677 PPPPPPPP 700
PPPPPPPP
Sbjct: 190 PPPPPPPP 197
Score = 26.2 bits (55), Expect = 5.9
Identities = 20/70 (28%), Positives = 21/70 (30%), Gaps = 1/70 (1%)
Frame = +1
Query: 493 SPPPPPXXXKXQTPXXAXPPPPXXXPPPP-XPPXXXXAAXNXXPXXXXXXXXXXXXXXXX 669
SP PP TP A P P PPPP PP + P
Sbjct: 220 SPEIPPTY----TPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPP 275
Query: 670 XXPPXPPPPP 699
P PP P
Sbjct: 276 PATPSQPPRP 285
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 30.7 bits (66), Expect = 0.27
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 496 PPPPPXXXKXQTPXXAXPPPPXXXPPPPXP 585
PPPPP PP PPPP P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 30.3 bits (65), Expect = 0.36
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +1
Query: 496 PPPPPXXXKXQTPXXAXPPPPXXXPPPPXPPXXXXAAXNXXP 621
PPPPP P PPPP PP A P
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLP 354
Score = 30.3 bits (65), Expect = 0.36
Identities = 21/77 (27%), Positives = 22/77 (28%), Gaps = 4/77 (5%)
Frame = +1
Query: 499 PPPPXXXKXQTPXXAXPP--PPXXXP--PPPXPPXXXXAAXNXXPXXXXXXXXXXXXXXX 666
PP + TP PP PP P PP PP A P
Sbjct: 404 PPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGM 463
Query: 667 XXXPPXPPPPPXXKXPP 717
PP PP P P
Sbjct: 464 PAAPPLPPAAPAPPPAP 480
Score = 28.7 bits (61), Expect = 1.1
Identities = 20/78 (25%), Positives = 23/78 (29%), Gaps = 3/78 (3%)
Frame = +1
Query: 493 SPPPPPXXXKXQTPXXAXPPPPXXXP--PPPXPPXXXXAAXNXXPXXXXXXXXXXXXXXX 666
+P PP +T P PP P PP PP + P
Sbjct: 400 APALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPL 459
Query: 667 XXXPPXPPP-PPXXKXPP 717
P PP PP PP
Sbjct: 460 PAGMPAAPPLPPAAPAPP 477
Score = 27.1 bits (57), Expect = 3.4
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 680 PPPPPPPXXKXPPXPP 727
PPPPPPP + PP
Sbjct: 311 PPPPPPPSRRNRGKPP 326
Score = 26.6 bits (56), Expect = 4.4
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +1
Query: 496 PPPPPXXXKXQTPXXAXPPPPXXXPPPPXPPXXXXAA 606
PP P A PP P P PP P AA
Sbjct: 450 PPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAA 486
Score = 26.2 bits (55), Expect = 5.9
Identities = 17/68 (25%), Positives = 19/68 (27%), Gaps = 1/68 (1%)
Frame = +1
Query: 493 SPPPPPXXXKXQTPXXAXPPPPXXXPPP-PXPPXXXXAAXNXXPXXXXXXXXXXXXXXXX 669
S PP P P P PPP P P ++ P
Sbjct: 228 SAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINST 287
Query: 670 XXPPXPPP 693
PP PPP
Sbjct: 288 SKPPLPPP 295
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 30.3 bits (65), Expect = 0.36
Identities = 20/80 (25%), Positives = 22/80 (27%), Gaps = 5/80 (6%)
Frame = +1
Query: 493 SPPPPPXXXKXQTPXXAXPPPPXXXPP-----PPXPPXXXXAAXNXXPXXXXXXXXXXXX 657
S P PP P + PP P PP PP P + P
Sbjct: 126 SAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPP 185
Query: 658 XXXXXXPPXPPPPPXXKXPP 717
PP PP PP
Sbjct: 186 SAPSLPSAVPPMPPKVPPPP 205
Score = 26.2 bits (55), Expect = 5.9
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +2
Query: 677 PPPPPPPPXXKXPPXPP 727
PPPPP P P PP
Sbjct: 6 PPPPPAPAPAAAAPAPP 22
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 27.5 bits (58), Expect = 2.5
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +1
Query: 496 PPPPPXXXKXQTPXXAXPPPP 558
PPPP P A PPPP
Sbjct: 909 PPPPTASMTASAPAIASPPPP 929
>SPAC13G7.03 |||up-frameshift suppressor3 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 278
Score = 27.1 bits (57), Expect = 3.4
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -1
Query: 100 IITFAPFQKVPPRK 59
I+T AP+QK+PP K
Sbjct: 94 IVTIAPYQKIPPSK 107
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 26.6 bits (56), Expect = 4.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 677 PPPPPPPP 700
PPPPPPPP
Sbjct: 306 PPPPPPPP 313
Score = 26.6 bits (56), Expect = 4.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 677 PPPPPPPP 700
PPPPPPPP
Sbjct: 307 PPPPPPPP 314
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 26.6 bits (56), Expect = 4.4
Identities = 18/74 (24%), Positives = 20/74 (27%)
Frame = +1
Query: 493 SPPPPPXXXKXQTPXXAXPPPPXXXPPPPXPPXXXXAAXNXXPXXXXXXXXXXXXXXXXX 672
+PP P P + PP P PP AA P
Sbjct: 1149 APPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAA--GVPPVPPPSEAPPVPKPSVG 1206
Query: 673 XPPXPPPPPXXKXP 714
PP PPP P
Sbjct: 1207 VPPVPPPSTAPPVP 1220
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 26.6 bits (56), Expect = 4.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 677 PPPPPPPP 700
PPPPPPPP
Sbjct: 1095 PPPPPPPP 1102
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.6 bits (56), Expect = 4.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 677 PPPPPPPP 700
PPPPPPPP
Sbjct: 370 PPPPPPPP 377
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 26.6 bits (56), Expect = 4.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 677 PPPPPPPP 700
PPPPPPPP
Sbjct: 945 PPPPPPPP 952
Score = 26.6 bits (56), Expect = 4.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 677 PPPPPPPP 700
PPPPPPPP
Sbjct: 946 PPPPPPPP 953
>SPAC11D3.08c |||amino acid permease, unknown 1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 550
Score = 26.2 bits (55), Expect = 5.9
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -3
Query: 125 FFYLPKXGNYNLRXFPKGTTAEKXKXLKGIPL 30
++YLPK G P T ++ + + G+PL
Sbjct: 498 YYYLPKIGGKTFFTGPIPTVQQENEYISGVPL 529
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,688,025
Number of Sequences: 5004
Number of extensions: 26262
Number of successful extensions: 447
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 239
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 420459900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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