Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_K11
(903 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X56597-1|CAA39935.1| 321|Homo sapiens fibrillarin protein. 36 0.27
M94077-1|AAA36181.1| 316|Homo sapiens loricrin protein. 36 0.27
M61120-1|AAA36180.1| 316|Homo sapiens loricrin protein. 36 0.27
M59849-1|AAA52453.1| 321|Homo sapiens fibrillarin protein. 36 0.27
CR536555-1|CAG38792.1| 316|Homo sapiens LOR protein. 36 0.27
CR457069-1|CAG33350.1| 321|Homo sapiens FBL protein. 36 0.27
BT020144-1|AAV38946.1| 321|Homo sapiens fibrillarin protein. 36 0.27
BT006830-1|AAP35476.1| 321|Homo sapiens fibrillarin protein. 36 0.27
BC108290-1|AAI08291.1| 316|Homo sapiens LOR protein protein. 36 0.27
BC034690-1|AAH34690.1| 316|Homo sapiens LOR protein protein. 36 0.27
BC019260-1|AAH19260.1| 321|Homo sapiens fibrillarin protein. 36 0.27
AL161636-5|CAI19560.1| 312|Homo sapiens loricrin protein. 36 0.27
AC006950-1|AAD15623.1| 227|Homo sapiens FBRL_HUMAN [AA 1- 227] ... 36 0.27
AC005393-3|AAC28913.1| 318|Homo sapiens FBRL_HUMAN protein. 36 0.27
AB013076-1|BAA25794.1| 338|Homo sapiens loricrin protein. 36 0.27
U10063-1|AAA57161.1| 423|Homo sapiens POU domain factor protein. 35 0.35
X79536-1|CAA56072.1| 320|Homo sapiens hnRNPcore protein A1 prot... 32 2.5
X12671-1|CAA31191.1| 320|Homo sapiens hnrnp a1 protein protein. 32 2.5
X06747-1|CAA29922.1| 320|Homo sapiens protein ( Human hnRNP cor... 32 2.5
X04347-1|CAA27874.1| 196|Homo sapiens protein ( Human liver mRN... 32 2.5
M99061-1|AAC83410.1| 645|Homo sapiens epidermal cytokeratin 2 p... 32 2.5
BC121133-1|AAI21134.1| 320|Homo sapiens heterogeneous nuclear r... 32 2.5
BC104237-1|AAI04238.1| 167|Homo sapiens HNRPA1 protein protein. 32 2.5
BC104236-1|AAI04237.1| 167|Homo sapiens HNRPA1 protein protein. 32 2.5
BC099644-1|AAH99644.1| 639|Homo sapiens keratin 2 (epidermal ic... 32 2.5
BC099643-1|AAH99643.1| 639|Homo sapiens keratin 2 (epidermal ic... 32 2.5
BC096294-1|AAH96294.1| 639|Homo sapiens keratin 2 (epidermal ic... 32 2.5
BC074502-1|AAH74502.1| 320|Homo sapiens heterogeneous nuclear r... 32 2.5
BC073162-1|AAH73162.1| 320|Homo sapiens heterogeneous nuclear r... 32 2.5
BC071945-1|AAH71945.1| 320|Homo sapiens heterogeneous nuclear r... 32 2.5
BC070315-1|AAH70315.1| 320|Homo sapiens HNRPA1 protein protein. 32 2.5
BC052296-1|AAH52296.1| 320|Homo sapiens heterogeneous nuclear r... 32 2.5
BC033714-1|AAH33714.1| 320|Homo sapiens heterogeneous nuclear r... 32 2.5
BC012158-1|AAH12158.1| 320|Homo sapiens heterogeneous nuclear r... 32 2.5
BC009600-1|AAH09600.1| 320|Homo sapiens heterogeneous nuclear r... 32 2.5
BC004945-1|AAH04945.1| 298|Homo sapiens Unknown (protein for IM... 32 2.5
BC002355-1|AAH02355.1| 320|Homo sapiens heterogeneous nuclear r... 32 2.5
AF019084-1|AAB81946.1| 645|Homo sapiens keratin 2e protein. 32 2.5
U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoi... 32 3.3
M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein. 32 3.3
AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alph... 32 3.3
AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alph... 32 3.3
BC108266-1|AAI08267.1| 320|Homo sapiens heterogeneous nuclear r... 31 4.3
AL137058-3|CAI16736.1| 320|Homo sapiens protein ( Human DNA seq... 31 4.3
AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens ... 31 4.3
Y10313-1|CAA71366.1| 453|Homo sapiens PC4 protein protein. 31 5.7
X71428-1|CAA50559.1| 525|Homo sapiens FUS gycline rich protein ... 31 5.7
U36561-1|AAA79948.1| 528|Homo sapiens fus-like protein protein. 31 5.7
S62140-1|AAB27102.1| 526|Homo sapiens TLS protein. 31 5.7
CR456747-1|CAG33028.1| 526|Homo sapiens FUS protein. 31 5.7
BT019890-1|AAV38693.1| 451|Homo sapiens interferon-related deve... 31 5.7
BT019889-1|AAV38692.1| 451|Homo sapiens interferon-related deve... 31 5.7
BT007131-1|AAP35795.1| 526|Homo sapiens fusion, derived from t(... 31 5.7
BC026062-1|AAH26062.1| 526|Homo sapiens fusion (involved in t(1... 31 5.7
BC002459-1|AAH02459.1| 526|Homo sapiens fusion (involved in t(1... 31 5.7
BC001272-1|AAH01272.1| 451|Homo sapiens interferon-related deve... 31 5.7
BC000402-1|AAH00402.1| 526|Homo sapiens fusion (involved in t(1... 31 5.7
AJ549096-1|CAD79346.1| 157|Homo sapiens BBF2H7/FUS protein prot... 31 5.7
AF071213-2|AAC35284.1| 525|Homo sapiens FUS/TLS protein protein. 31 5.7
AF071213-1|AAC35285.1| 526|Homo sapiens FUS/TLS protein protein. 31 5.7
AC005192-2|AAS07421.1| 245|Homo sapiens unknown protein. 31 5.7
AC005192-1|AAC24562.1| 262|Homo sapiens unknown protein. 31 5.7
AB208902-1|BAD92139.1| 300|Homo sapiens fusion (involved in t(1... 31 5.7
BC113470-1|AAI13471.1| 378|Homo sapiens LOC653115 protein protein. 31 7.6
BC112027-1|AAI12028.1| 378|Homo sapiens heterogeneous nuclear r... 31 7.6
BC080591-1|AAH80591.1| 189|Homo sapiens HNRPA3 protein protein. 31 7.6
AY363225-1|AAQ63629.1| 378|Homo sapiens heterogeneous nuclear r... 31 7.6
AC079305-1|AAY14709.1| 378|Homo sapiens unknown protein. 31 7.6
Z29074-1|CAA82315.1| 623|Homo sapiens cytokeratin 9 protein. 30 10.0
X75015-1|CAA52924.1| 622|Homo sapiens keratin 9 protein. 30 10.0
S69510-1|AAC60619.1| 622|Homo sapiens cytokeratin 9 protein. 30 10.0
L20433-1|AAA65605.1| 420|Homo sapiens octamer binding transcrip... 30 10.0
BC030289-1|AAH30289.1| 180|Homo sapiens SIX3 protein protein. 30 10.0
AL445209-3|CAI15184.1| 419|Homo sapiens POU domain, class 4, tr... 30 10.0
AL162671-1|CAB83141.1| 164|Homo sapiens human homeobox protein ... 30 10.0
AJ012611-1|CAB42539.1| 332|Homo sapiens SIX3 protein protein. 30 10.0
AF428047-1|AAL18841.1| 259|Homo sapiens c15 anti-Der p1 scFv an... 30 10.0
AF092047-1|AAD11939.1| 332|Homo sapiens homeobox protein Six3 p... 30 10.0
AF083891-1|AAD51091.1| 332|Homo sapiens SIX3 protein protein. 30 10.0
AF049339-1|AAD15753.1| 332|Homo sapiens Six3 protein. 30 10.0
AC012354-1|AAX93283.1| 332|Homo sapiens unknown protein. 30 10.0
AB209373-1|BAD92610.1| 410|Homo sapiens CS0DA006YC23 variant pr... 30 10.0
>X56597-1|CAA39935.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 35.5 bits (78), Expect = 0.27
Identities = 22/51 (43%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGG--XGGXRNK 756
G GG G F G RG G +GG G G GG GGGG GG R +
Sbjct: 23 GRGGRGGFGGGRGRGGGFRG-RGRGGGGGGGGGGGGGRGGGGFHSGGNRGR 72
Score = 31.1 bits (67), Expect = 5.7
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGGXR 762
G GG G+ G +RG G GG G G GG GG G R
Sbjct: 29 GFGG-GRGRGGGFRGRGRGGGGGGGGGGGGGRGGGGFHSGGNRGRGR 74
>M94077-1|AAA36181.1| 316|Homo sapiens loricrin protein.
Length = 316
Score = 35.5 bits (78), Expect = 0.27
Identities = 20/47 (42%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRG--XGXXXPXXKGGXRGXGXVXGGXXGGGGXGG 768
G GGCG F G G G GG G GG GGGG GG
Sbjct: 30 GGGGCGFFGGGGSGGGSSGSGCGYSGGGGYSGGGCGGGSSGGGGGGG 76
>M61120-1|AAA36180.1| 316|Homo sapiens loricrin protein.
Length = 316
Score = 35.5 bits (78), Expect = 0.27
Identities = 20/47 (42%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRG--XGXXXPXXKGGXRGXGXVXGGXXGGGGXGG 768
G GGCG F G G G GG G GG GGGG GG
Sbjct: 30 GGGGCGFFGGGGSGGGSSGSGCGYSGGGGYSGGGCGGGSSGGGGGGG 76
>M59849-1|AAA52453.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 35.5 bits (78), Expect = 0.27
Identities = 22/51 (43%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGG--XGGXRNK 756
G GG G F G RG G +GG G G GG GGGG GG R +
Sbjct: 23 GRGGRGGFGGGRGRGGGFRG-RGRGGGGGGGGGGGGGRGGGGFHSGGNRGR 72
Score = 31.1 bits (67), Expect = 5.7
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGGXR 762
G GG G+ G +RG G GG G G GG GG G R
Sbjct: 29 GFGG-GRGRGGGFRGRGRGGGGGGGGGGGGGRGGGGFHSGGNRGRGR 74
>CR536555-1|CAG38792.1| 316|Homo sapiens LOR protein.
Length = 316
Score = 35.5 bits (78), Expect = 0.27
Identities = 20/47 (42%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRG--XGXXXPXXKGGXRGXGXVXGGXXGGGGXGG 768
G GGCG F G G G GG G GG GGGG GG
Sbjct: 30 GGGGCGFFGGGGSGGGSSGSGCGYSGGGGYSGGGCGGGSSGGGGGGG 76
>CR457069-1|CAG33350.1| 321|Homo sapiens FBL protein.
Length = 321
Score = 35.5 bits (78), Expect = 0.27
Identities = 22/51 (43%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGG--XGGXRNK 756
G GG G F G RG G +GG G G GG GGGG GG R +
Sbjct: 23 GRGGRGGFGGGRGRGGGFRG-RGRGGGGGGGGGGGGGRGGGGFHSGGNRGR 72
Score = 31.1 bits (67), Expect = 5.7
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGGXR 762
G GG G+ G +RG G GG G G GG GG G R
Sbjct: 29 GFGG-GRGRGGGFRGRGRGGGGGGGGGGGGGRGGGGFHSGGNRGRGR 74
>BT020144-1|AAV38946.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 35.5 bits (78), Expect = 0.27
Identities = 22/51 (43%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGG--XGGXRNK 756
G GG G F G RG G +GG G G GG GGGG GG R +
Sbjct: 23 GRGGRGGFGGGRGRGGGFRG-RGRGGGGGGGGGGGGGRGGGGFHSGGNRGR 72
Score = 31.1 bits (67), Expect = 5.7
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGGXR 762
G GG G+ G +RG G GG G G GG GG G R
Sbjct: 29 GFGG-GRGRGGGFRGRGRGGGGGGGGGGGGGRGGGGFHSGGNRGRGR 74
>BT006830-1|AAP35476.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 35.5 bits (78), Expect = 0.27
Identities = 22/51 (43%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGG--XGGXRNK 756
G GG G F G RG G +GG G G GG GGGG GG R +
Sbjct: 23 GRGGRGGFGGGRGRGGGFRG-RGRGGGGGGGGGGGGGRGGGGFHSGGNRGR 72
Score = 31.1 bits (67), Expect = 5.7
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGGXR 762
G GG G+ G +RG G GG G G GG GG G R
Sbjct: 29 GFGG-GRGRGGGFRGRGRGGGGGGGGGGGGGRGGGGFHSGGNRGRGR 74
>BC108290-1|AAI08291.1| 316|Homo sapiens LOR protein protein.
Length = 316
Score = 35.5 bits (78), Expect = 0.27
Identities = 20/47 (42%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRG--XGXXXPXXKGGXRGXGXVXGGXXGGGGXGG 768
G GGCG F G G G GG G GG GGGG GG
Sbjct: 30 GGGGCGFFGGGGSGGGSSGSGCGYSGGGGYSGGGCGGGSSGGGGGGG 76
>BC034690-1|AAH34690.1| 316|Homo sapiens LOR protein protein.
Length = 316
Score = 35.5 bits (78), Expect = 0.27
Identities = 20/47 (42%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRG--XGXXXPXXKGGXRGXGXVXGGXXGGGGXGG 768
G GGCG F G G G GG G GG GGGG GG
Sbjct: 30 GGGGCGFFGGGGSGGGSSGSGCGYSGGGGYSGGGCGGGSSGGGGGGG 76
>BC019260-1|AAH19260.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 35.5 bits (78), Expect = 0.27
Identities = 22/51 (43%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGG--XGGXRNK 756
G GG G F G RG G +GG G G GG GGGG GG R +
Sbjct: 23 GRGGRGGFGGGRGRGGGFRG-RGRGGGGGGGGGGGGGRGGGGFHSGGNRGR 72
Score = 31.1 bits (67), Expect = 5.7
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGGXR 762
G GG G+ G +RG G GG G G GG GG G R
Sbjct: 29 GFGG-GRGRGGGFRGRGRGGGGGGGGGGGGGRGGGGFHSGGNRGRGR 74
>AL161636-5|CAI19560.1| 312|Homo sapiens loricrin protein.
Length = 312
Score = 35.5 bits (78), Expect = 0.27
Identities = 20/47 (42%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRG--XGXXXPXXKGGXRGXGXVXGGXXGGGGXGG 768
G GGCG F G G G GG G GG GGGG GG
Sbjct: 30 GGGGCGFFGGGGSGGGSSGSGCGYSGGGGYSGGGCGGGSSGGGGGGG 76
>AC006950-1|AAD15623.1| 227|Homo sapiens FBRL_HUMAN [AA 1- 227]
protein.
Length = 227
Score = 35.5 bits (78), Expect = 0.27
Identities = 22/51 (43%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGG--XGGXRNK 756
G GG G F G RG G +GG G G GG GGGG GG R +
Sbjct: 23 GRGGRGGFGGGRGRGGGFRG-RGRGGGGGGGGGGGGGRGGGGFHSGGNRGR 72
Score = 31.1 bits (67), Expect = 5.7
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGGXR 762
G GG G+ G +RG G GG G G GG GG G R
Sbjct: 29 GFGG-GRGRGGGFRGRGRGGGGGGGGGGGGGRGGGGFHSGGNRGRGR 74
>AC005393-3|AAC28913.1| 318|Homo sapiens FBRL_HUMAN protein.
Length = 318
Score = 35.5 bits (78), Expect = 0.27
Identities = 22/51 (43%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGG--XGGXRNK 756
G GG G F G RG G +GG G G GG GGGG GG R +
Sbjct: 20 GRGGRGGFGGGRGRGGGFRG-RGRGGGGGGGGGGGGGRGGGGFHSGGNRGR 69
Score = 31.1 bits (67), Expect = 5.7
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGGXR 762
G GG G+ G +RG G GG G G GG GG G R
Sbjct: 26 GFGG-GRGRGGGFRGRGRGGGGGGGGGGGGGRGGGGFHSGGNRGRGR 71
>AB013076-1|BAA25794.1| 338|Homo sapiens loricrin protein.
Length = 338
Score = 35.5 bits (78), Expect = 0.27
Identities = 20/47 (42%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRG--XGXXXPXXKGGXRGXGXVXGGXXGGGGXGG 768
G GGCG F G G G GG G GG GGGG GG
Sbjct: 30 GGGGCGFFGGGGSGGGSSGSGCGYSGGGGYSGGGCGGGSSGGGGGGG 76
>U10063-1|AAA57161.1| 423|Homo sapiens POU domain factor protein.
Length = 423
Score = 35.1 bits (77), Expect = 0.35
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGG 768
G GG G G P GG G G GG GGGG GG
Sbjct: 130 GAGGAGGAGAAAGGGGAHDGPGGGGGPGGGGGPGGGGPGGGGGGG 174
Score = 30.3 bits (65), Expect = 10.0
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGG 768
G GG G G G GG G G G GGGG GG
Sbjct: 133 GAGGAGAAAGGGGAHDGPGGGGGPGGGGGPGGGGPGGGGGGGPGG 177
>X79536-1|CAA56072.1| 320|Homo sapiens hnRNPcore protein A1
protein.
Length = 320
Score = 32.3 bits (70), Expect = 2.5
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGG 768
G G G F G G G +GG GG GGGG GG
Sbjct: 195 GRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGG 239
>X12671-1|CAA31191.1| 320|Homo sapiens hnrnp a1 protein protein.
Length = 320
Score = 32.3 bits (70), Expect = 2.5
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGG 768
G G G F G G G +GG GG GGGG GG
Sbjct: 195 GRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGG 239
>X06747-1|CAA29922.1| 320|Homo sapiens protein ( Human hnRNP core
protein A1. ).
Length = 320
Score = 32.3 bits (70), Expect = 2.5
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGG 768
G G G F G G G +GG GG GGGG GG
Sbjct: 195 GRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGG 239
>X04347-1|CAA27874.1| 196|Homo sapiens protein ( Human liver mRNA
fragment DNA binding protein UPI homologue
(C-terminus). ).
Length = 196
Score = 32.3 bits (70), Expect = 2.5
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGG 768
G G G F G G G +GG GG GGGG GG
Sbjct: 71 GRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGG 115
>M99061-1|AAC83410.1| 645|Homo sapiens epidermal cytokeratin 2
protein.
Length = 645
Score = 32.3 bits (70), Expect = 2.5
Identities = 19/53 (35%), Positives = 21/53 (39%), Gaps = 6/53 (11%)
Frame = -2
Query: 902 GXGGCGKFXKGXYR------GXGXXXPXXKGGXRGXGXVXGGXXGGGGXGGXR 762
G GG G G Y G G +GG G G + GG G GG G R
Sbjct: 526 GSGGRGSSSGGGYSSGSSSYGSGGRQSGSRGGSGGGGSISGGGYGSGGGSGGR 578
>BC121133-1|AAI21134.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 32.3 bits (70), Expect = 2.5
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGG 768
G G G F G G G +GG GG GGGG GG
Sbjct: 195 GRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGG 239
>BC104237-1|AAI04238.1| 167|Homo sapiens HNRPA1 protein protein.
Length = 167
Score = 32.3 bits (70), Expect = 2.5
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGG 768
G G G F G G G +GG GG GGGG GG
Sbjct: 42 GRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGG 86
>BC104236-1|AAI04237.1| 167|Homo sapiens HNRPA1 protein protein.
Length = 167
Score = 32.3 bits (70), Expect = 2.5
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGG 768
G G G F G G G +GG GG GGGG GG
Sbjct: 42 GRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGG 86
>BC099644-1|AAH99644.1| 639|Homo sapiens keratin 2 (epidermal
ichthyosis bullosa of Siemens) protein.
Length = 639
Score = 32.3 bits (70), Expect = 2.5
Identities = 19/53 (35%), Positives = 21/53 (39%), Gaps = 6/53 (11%)
Frame = -2
Query: 902 GXGGCGKFXKGXYR------GXGXXXPXXKGGXRGXGXVXGGXXGGGGXGGXR 762
G GG G G Y G G +GG G G + GG G GG G R
Sbjct: 520 GSGGRGSSSGGGYSSGSSSYGSGGRQSGSRGGSGGGGSISGGGYGSGGGSGGR 572
>BC099643-1|AAH99643.1| 639|Homo sapiens keratin 2 (epidermal
ichthyosis bullosa of Siemens) protein.
Length = 639
Score = 32.3 bits (70), Expect = 2.5
Identities = 19/53 (35%), Positives = 21/53 (39%), Gaps = 6/53 (11%)
Frame = -2
Query: 902 GXGGCGKFXKGXYR------GXGXXXPXXKGGXRGXGXVXGGXXGGGGXGGXR 762
G GG G G Y G G +GG G G + GG G GG G R
Sbjct: 520 GSGGRGSSSGGGYSSGSSSYGSGGRQSGSRGGSGGGGSISGGGYGSGGGSGGR 572
>BC096294-1|AAH96294.1| 639|Homo sapiens keratin 2 (epidermal
ichthyosis bullosa of Siemens) protein.
Length = 639
Score = 32.3 bits (70), Expect = 2.5
Identities = 19/53 (35%), Positives = 21/53 (39%), Gaps = 6/53 (11%)
Frame = -2
Query: 902 GXGGCGKFXKGXYR------GXGXXXPXXKGGXRGXGXVXGGXXGGGGXGGXR 762
G GG G G Y G G +GG G G + GG G GG G R
Sbjct: 520 GSGGRGSSSGGGYSSGSSSYGSGGRQSGSRGGSGGGGSISGGGYGSGGGSGGR 572
>BC074502-1|AAH74502.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 32.3 bits (70), Expect = 2.5
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGG 768
G G G F G G G +GG GG GGGG GG
Sbjct: 195 GRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGG 239
>BC073162-1|AAH73162.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 32.3 bits (70), Expect = 2.5
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGG 768
G G G F G G G +GG GG GGGG GG
Sbjct: 195 GRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGG 239
>BC071945-1|AAH71945.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 32.3 bits (70), Expect = 2.5
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGG 768
G G G F G G G +GG GG GGGG GG
Sbjct: 195 GRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGG 239
>BC070315-1|AAH70315.1| 320|Homo sapiens HNRPA1 protein protein.
Length = 320
Score = 32.3 bits (70), Expect = 2.5
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGG 768
G G G F G G G +GG GG GGGG GG
Sbjct: 195 GRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGG 239
>BC052296-1|AAH52296.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 32.3 bits (70), Expect = 2.5
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGG 768
G G G F G G G +GG GG GGGG GG
Sbjct: 195 GRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGG 239
>BC033714-1|AAH33714.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 32.3 bits (70), Expect = 2.5
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGG 768
G G G F G G G +GG GG GGGG GG
Sbjct: 195 GRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGG 239
>BC012158-1|AAH12158.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 32.3 bits (70), Expect = 2.5
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGG 768
G G G F G G G +GG GG GGGG GG
Sbjct: 195 GRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGG 239
>BC009600-1|AAH09600.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 32.3 bits (70), Expect = 2.5
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGG 768
G G G F G G G +GG GG GGGG GG
Sbjct: 195 GRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGG 239
>BC004945-1|AAH04945.1| 298|Homo sapiens Unknown (protein for
IMAGE:3615335) protein.
Length = 298
Score = 32.3 bits (70), Expect = 2.5
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGG 768
G G G F G G G +GG GG GGGG GG
Sbjct: 173 GRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGG 217
>BC002355-1|AAH02355.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 32.3 bits (70), Expect = 2.5
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGG 768
G G G F G G G +GG GG GGGG GG
Sbjct: 195 GRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGG 239
>AF019084-1|AAB81946.1| 645|Homo sapiens keratin 2e protein.
Length = 645
Score = 32.3 bits (70), Expect = 2.5
Identities = 19/53 (35%), Positives = 21/53 (39%), Gaps = 6/53 (11%)
Frame = -2
Query: 902 GXGGCGKFXKGXYR------GXGXXXPXXKGGXRGXGXVXGGXXGGGGXGGXR 762
G GG G G Y G G +GG G G + GG G GG G R
Sbjct: 526 GSGGRGSSSGGGYSSGSSSYGSGGRQSGSRGGSGGGGSISGGGYGSGGGSGGR 578
>U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoid
antigen 2/type XVII collagen protein.
Length = 1497
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = +1
Query: 799 PXTXPXPRXPPLXXGXXXPXPRXXPXLNLPHPPXP 903
P P PR PP P PR P LP PP P
Sbjct: 858 PPGPPGPRGPPGPSIPGPPGPRGPPGEGLPGPPGP 892
>M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein.
Length = 1532
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = +1
Query: 799 PXTXPXPRXPPLXXGXXXPXPRXXPXLNLPHPPXP 903
P P PR PP P PR P LP PP P
Sbjct: 893 PPGPPGPRGPPGPSIPGPPGPRGPPGEGLPGPPGP 927
>AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1497
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = +1
Query: 799 PXTXPXPRXPPLXXGXXXPXPRXXPXLNLPHPPXP 903
P P PR PP P PR P LP PP P
Sbjct: 858 PPGPPGPRGPPGPSIPGPPGPRGPPGEGLPGPPGP 892
>AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1415
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = +1
Query: 799 PXTXPXPRXPPLXXGXXXPXPRXXPXLNLPHPPXP 903
P P PR PP P PR P LP PP P
Sbjct: 858 PPGPPGPRGPPGPSIPGPPGPRGPPGEGLPGPPGP 892
>BC108266-1|AAI08267.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1-like protein.
Length = 320
Score = 31.5 bits (68), Expect = 4.3
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGG 768
G G G F G G G +GG GG GGGG GG
Sbjct: 195 GRRGSGNFGGGRGDGFGGNDNFGRGGNFSGRGGFGGSCGGGGYGG 239
>AL137058-3|CAI16736.1| 320|Homo sapiens protein ( Human DNA
sequence from clone RP11-78J21 on chromosome
13q32.2-33.3 Contains 2 novel genes, a pseudogene
similar to part of TPTE and ).
Length = 320
Score = 31.5 bits (68), Expect = 4.3
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGG 768
G G G F G G G +GG GG GGGG GG
Sbjct: 195 GRRGSGNFGGGRGDGFGGNDNFGRGGNFSGRGGFGGSCGGGGYGG 239
>AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens
cDNA FLJ45135 fis, clone BRAWH3038252, highly similar
to Formin 1 isoform IV. ).
Length = 844
Score = 31.5 bits (68), Expect = 4.3
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +1
Query: 796 PPXTXPXPRXPPLXXGXXXPXPRXXPXLNLPHPPXP 903
PP P P PP P P P N P PP P
Sbjct: 329 PPPPPPPPPLPPPSSAGPPPPPPPPPLPNSPAPPNP 364
>Y10313-1|CAA71366.1| 453|Homo sapiens PC4 protein protein.
Length = 453
Score = 31.1 bits (67), Expect = 5.7
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +1
Query: 211 SYRKHRVTCPFTSGAETCPSKKSILIWLKLSTLCPPEEALVKMSKQPQKFPN 366
SY K + T S T S+L W L T+CP E K+ K P+
Sbjct: 222 SYLKEKDTTVICSTPNTVLHISSLLAWTLLLTICPINEVKKKLEMHFHKLPS 273
>X71428-1|CAA50559.1| 525|Homo sapiens FUS gycline rich protein
protein.
Length = 525
Score = 31.1 bits (67), Expect = 5.7
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = -2
Query: 881 FXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGG 768
F +G G G +GG G G GG GGGG GG
Sbjct: 374 FNRGGGNGRGGRG---RGGPMGRGGYGGGGSGGGGRGG 408
>U36561-1|AAA79948.1| 528|Homo sapiens fus-like protein protein.
Length = 528
Score = 31.1 bits (67), Expect = 5.7
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = -2
Query: 881 FXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGG 768
F +G G G +GG G G GG GGGG GG
Sbjct: 378 FNRGGGNGRGGRG---RGGPMGRGGYGGGGSGGGGRGG 412
>S62140-1|AAB27102.1| 526|Homo sapiens TLS protein.
Length = 526
Score = 31.1 bits (67), Expect = 5.7
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = -2
Query: 881 FXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGG 768
F +G G G +GG G G GG GGGG GG
Sbjct: 375 FNRGGGNGRGGRG---RGGPMGRGGYGGGGSGGGGRGG 409
>CR456747-1|CAG33028.1| 526|Homo sapiens FUS protein.
Length = 526
Score = 31.1 bits (67), Expect = 5.7
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = -2
Query: 881 FXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGG 768
F +G G G +GG G G GG GGGG GG
Sbjct: 375 FNRGGGNGRGGRG---RGGPMGRGGYGGGGSGGGGRGG 409
>BT019890-1|AAV38693.1| 451|Homo sapiens interferon-related
developmental regulator 1 protein.
Length = 451
Score = 31.1 bits (67), Expect = 5.7
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +1
Query: 211 SYRKHRVTCPFTSGAETCPSKKSILIWLKLSTLCPPEEALVKMSKQPQKFPN 366
SY K + T S T S+L W L T+CP E K+ K P+
Sbjct: 222 SYLKEKDTTVICSTPNTVLHISSLLAWTLLLTICPINEVKKKLEMHFHKLPS 273
>BT019889-1|AAV38692.1| 451|Homo sapiens interferon-related
developmental regulator 1 protein.
Length = 451
Score = 31.1 bits (67), Expect = 5.7
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +1
Query: 211 SYRKHRVTCPFTSGAETCPSKKSILIWLKLSTLCPPEEALVKMSKQPQKFPN 366
SY K + T S T S+L W L T+CP E K+ K P+
Sbjct: 222 SYLKEKDTTVICSTPNTVLHISSLLAWTLLLTICPINEVKKKLEMHFHKLPS 273
>BT007131-1|AAP35795.1| 526|Homo sapiens fusion, derived from
t(12;16) malignant liposarcoma protein.
Length = 526
Score = 31.1 bits (67), Expect = 5.7
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = -2
Query: 881 FXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGG 768
F +G G G +GG G G GG GGGG GG
Sbjct: 375 FNRGGGNGRGGRG---RGGPMGRGGYGGGGSGGGGRGG 409
>BC026062-1|AAH26062.1| 526|Homo sapiens fusion (involved in
t(12;16) in malignant liposarcoma) protein.
Length = 526
Score = 31.1 bits (67), Expect = 5.7
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = -2
Query: 881 FXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGG 768
F +G G G +GG G G GG GGGG GG
Sbjct: 375 FNRGGGNGRGGRG---RGGPMGRGGYGGGGSGGGGRGG 409
>BC002459-1|AAH02459.1| 526|Homo sapiens fusion (involved in
t(12;16) in malignant liposarcoma) protein.
Length = 526
Score = 31.1 bits (67), Expect = 5.7
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = -2
Query: 881 FXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGG 768
F +G G G +GG G G GG GGGG GG
Sbjct: 375 FNRGGGNGRGGRG---RGGPMGRGGYGGGGSGGGGRGG 409
>BC001272-1|AAH01272.1| 451|Homo sapiens interferon-related
developmental regulator 1 protein.
Length = 451
Score = 31.1 bits (67), Expect = 5.7
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +1
Query: 211 SYRKHRVTCPFTSGAETCPSKKSILIWLKLSTLCPPEEALVKMSKQPQKFPN 366
SY K + T S T S+L W L T+CP E K+ K P+
Sbjct: 222 SYLKEKDTTVICSTPNTVLHISSLLAWTLLLTICPINEVKKKLEMHFHKLPS 273
>BC000402-1|AAH00402.1| 526|Homo sapiens fusion (involved in
t(12;16) in malignant liposarcoma) protein.
Length = 526
Score = 31.1 bits (67), Expect = 5.7
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = -2
Query: 881 FXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGG 768
F +G G G +GG G G GG GGGG GG
Sbjct: 375 FNRGGGNGRGGRG---RGGPMGRGGYGGGGSGGGGRGG 409
>AJ549096-1|CAD79346.1| 157|Homo sapiens BBF2H7/FUS protein
protein.
Length = 157
Score = 31.1 bits (67), Expect = 5.7
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = -2
Query: 881 FXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGG 768
F +G G G +GG G G GG GGGG GG
Sbjct: 108 FNRGGGNGRGGRG---RGGPMGRGGYGGGGSGGGGRGG 142
>AF071213-2|AAC35284.1| 525|Homo sapiens FUS/TLS protein protein.
Length = 525
Score = 31.1 bits (67), Expect = 5.7
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = -2
Query: 881 FXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGG 768
F +G G G +GG G G GG GGGG GG
Sbjct: 374 FNRGGGNGRGGRG---RGGPMGRGGYGGGGSGGGGRGG 408
>AF071213-1|AAC35285.1| 526|Homo sapiens FUS/TLS protein protein.
Length = 526
Score = 31.1 bits (67), Expect = 5.7
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = -2
Query: 881 FXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGG 768
F +G G G +GG G G GG GGGG GG
Sbjct: 375 FNRGGGNGRGGRG---RGGPMGRGGYGGGGSGGGGRGG 409
>AC005192-2|AAS07421.1| 245|Homo sapiens unknown protein.
Length = 245
Score = 31.1 bits (67), Expect = 5.7
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +1
Query: 211 SYRKHRVTCPFTSGAETCPSKKSILIWLKLSTLCPPEEALVKMSKQPQKFPN 366
SY K + T S T S+L W L T+CP E K+ K P+
Sbjct: 16 SYLKEKDTTVICSTPNTVLHISSLLAWTLLLTICPINEVKKKLEMHFHKLPS 67
>AC005192-1|AAC24562.1| 262|Homo sapiens unknown protein.
Length = 262
Score = 31.1 bits (67), Expect = 5.7
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +1
Query: 211 SYRKHRVTCPFTSGAETCPSKKSILIWLKLSTLCPPEEALVKMSKQPQKFPN 366
SY K + T S T S+L W L T+CP E K+ K P+
Sbjct: 33 SYLKEKDTTVICSTPNTVLHISSLLAWTLLLTICPINEVKKKLEMHFHKLPS 84
>AB208902-1|BAD92139.1| 300|Homo sapiens fusion (involved in
t(12;16) in malignant liposarcoma) isoform a variant
protein.
Length = 300
Score = 31.1 bits (67), Expect = 5.7
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = -2
Query: 881 FXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGG 768
F +G G G +GG G G GG GGGG GG
Sbjct: 149 FNRGGGNGRGGRG---RGGPMGRGGYGGGGSGGGGRGG 183
>BC113470-1|AAI13471.1| 378|Homo sapiens LOC653115 protein protein.
Length = 378
Score = 30.7 bits (66), Expect = 7.6
Identities = 19/50 (38%), Positives = 20/50 (40%), Gaps = 4/50 (8%)
Frame = -2
Query: 896 GGCGKFXKGXYRGXGXXXPXXKGGXRGXGXV----XGGXXGGGGXGGXRN 759
GG G +G Y G G GG G G GG GGG GG N
Sbjct: 279 GGPGYSSRGGYGGGGPGYGNQGGGYGGGGGYDGYNEGGNFGGGNYGGGGN 328
>BC112027-1|AAI12028.1| 378|Homo sapiens heterogeneous nuclear
ribonucleoprotein A3 protein.
Length = 378
Score = 30.7 bits (66), Expect = 7.6
Identities = 19/50 (38%), Positives = 20/50 (40%), Gaps = 4/50 (8%)
Frame = -2
Query: 896 GGCGKFXKGXYRGXGXXXPXXKGGXRGXGXV----XGGXXGGGGXGGXRN 759
GG G +G Y G G GG G G GG GGG GG N
Sbjct: 279 GGPGYSSRGGYGGGGPGYGNQGGGYGGGGGYDGYNEGGNFGGGNYGGGGN 328
>BC080591-1|AAH80591.1| 189|Homo sapiens HNRPA3 protein protein.
Length = 189
Score = 30.7 bits (66), Expect = 7.6
Identities = 19/50 (38%), Positives = 20/50 (40%), Gaps = 4/50 (8%)
Frame = -2
Query: 896 GGCGKFXKGXYRGXGXXXPXXKGGXRGXGXV----XGGXXGGGGXGGXRN 759
GG G +G Y G G GG G G GG GGG GG N
Sbjct: 90 GGPGYSSRGGYGGGGPGYGNQGGGYGGGGGYDGYNEGGNFGGGNYGGGGN 139
>AY363225-1|AAQ63629.1| 378|Homo sapiens heterogeneous nuclear
ribonucleoprotein A3 protein.
Length = 378
Score = 30.7 bits (66), Expect = 7.6
Identities = 19/50 (38%), Positives = 20/50 (40%), Gaps = 4/50 (8%)
Frame = -2
Query: 896 GGCGKFXKGXYRGXGXXXPXXKGGXRGXGXV----XGGXXGGGGXGGXRN 759
GG G +G Y G G GG G G GG GGG GG N
Sbjct: 279 GGPGYSSRGGYGGGGPGYGNQGGGYGGGGGYDGYNEGGNFGGGNYGGGGN 328
>AC079305-1|AAY14709.1| 378|Homo sapiens unknown protein.
Length = 378
Score = 30.7 bits (66), Expect = 7.6
Identities = 19/50 (38%), Positives = 20/50 (40%), Gaps = 4/50 (8%)
Frame = -2
Query: 896 GGCGKFXKGXYRGXGXXXPXXKGGXRGXGXV----XGGXXGGGGXGGXRN 759
GG G +G Y G G GG G G GG GGG GG N
Sbjct: 279 GGPGYSSRGGYGGGGPGYGNQGGGYGGGGGYDGYNEGGNFGGGNYGGGGN 328
>Z29074-1|CAA82315.1| 623|Homo sapiens cytokeratin 9 protein.
Length = 623
Score = 30.3 bits (65), Expect = 10.0
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGG 780
G GG G+F G G +GG G GG GGG
Sbjct: 40 GRGGGGRFSSSSGYGGGSSRVCGRGGGGSFGYSYGGGSGGG 80
>X75015-1|CAA52924.1| 622|Homo sapiens keratin 9 protein.
Length = 622
Score = 30.3 bits (65), Expect = 10.0
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGG 780
G GG G+F G G +GG G GG GGG
Sbjct: 39 GRGGGGRFSSSSGYGGGSSRVCGRGGGGSFGYSYGGGSGGG 79
>S69510-1|AAC60619.1| 622|Homo sapiens cytokeratin 9 protein.
Length = 622
Score = 30.3 bits (65), Expect = 10.0
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGG 780
G GG G+F G G +GG G GG GGG
Sbjct: 39 GRGGGGRFSSSSGYGGGSSRVCGRGGGGSFGYSYGGGSGGG 79
>L20433-1|AAA65605.1| 420|Homo sapiens octamer binding
transcription factor 1 protein.
Length = 420
Score = 30.3 bits (65), Expect = 10.0
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGG 768
G GG G G G GG G G G GGGG GG
Sbjct: 130 GAGGAGAAAGGGGAHDGPGGGGGPGGGGGPGGGGPGGGGGGGPGG 174
>BC030289-1|AAH30289.1| 180|Homo sapiens SIX3 protein protein.
Length = 180
Score = 30.3 bits (65), Expect = 10.0
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -2
Query: 872 GXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGGXR 762
G G G GG G G G GGGG GG R
Sbjct: 35 GNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGSR 71
>AL445209-3|CAI15184.1| 419|Homo sapiens POU domain, class 4,
transcription factor 1 protein.
Length = 419
Score = 30.3 bits (65), Expect = 10.0
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = -2
Query: 902 GXGGCGKFXKGXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGG 768
G GG G G G GG G G GG GGG GG
Sbjct: 130 GAGGAGAAAGGGGAHDGPGGGGGPGGGGGPGGGPGGGGGGGPGGG 174
>AL162671-1|CAB83141.1| 164|Homo sapiens human homeobox protein
SIX3 (NP_005404) protein.
Length = 164
Score = 30.3 bits (65), Expect = 10.0
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -2
Query: 872 GXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGGXR 762
G G G GG G G G GGGG GG R
Sbjct: 35 GNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGSR 71
>AJ012611-1|CAB42539.1| 332|Homo sapiens SIX3 protein protein.
Length = 332
Score = 30.3 bits (65), Expect = 10.0
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -2
Query: 872 GXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGGXR 762
G G G GG G G G GGGG GG R
Sbjct: 35 GNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGSR 71
>AF428047-1|AAL18841.1| 259|Homo sapiens c15 anti-Der p1 scFv
antibody protein.
Length = 259
Score = 30.3 bits (65), Expect = 10.0
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -2
Query: 866 YRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGG 768
Y G G GG R GG GGGG GG
Sbjct: 110 YWGQGTLVTVSSGGPRSPSPPGGGGSGGGGSGG 142
>AF092047-1|AAD11939.1| 332|Homo sapiens homeobox protein Six3
protein.
Length = 332
Score = 30.3 bits (65), Expect = 10.0
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -2
Query: 872 GXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGGXR 762
G G G GG G G G GGGG GG R
Sbjct: 35 GNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGSR 71
>AF083891-1|AAD51091.1| 332|Homo sapiens SIX3 protein protein.
Length = 332
Score = 30.3 bits (65), Expect = 10.0
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -2
Query: 872 GXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGGXR 762
G G G GG G G G GGGG GG R
Sbjct: 35 GNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGSR 71
>AF049339-1|AAD15753.1| 332|Homo sapiens Six3 protein.
Length = 332
Score = 30.3 bits (65), Expect = 10.0
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -2
Query: 872 GXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGGXR 762
G G G GG G G G GGGG GG R
Sbjct: 35 GNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGSR 71
>AC012354-1|AAX93283.1| 332|Homo sapiens unknown protein.
Length = 332
Score = 30.3 bits (65), Expect = 10.0
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -2
Query: 872 GXYRGXGXXXPXXKGGXRGXGXVXGGXXGGGGXGGXR 762
G G G GG G G G GGGG GG R
Sbjct: 35 GNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGSR 71
>AB209373-1|BAD92610.1| 410|Homo sapiens CS0DA006YC23 variant
protein.
Length = 410
Score = 30.3 bits (65), Expect = 10.0
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +1
Query: 796 PPXTXPXPRXPPLXXGXXXPXPRXXPXLNLPHPP 897
PP + P P PP G P P P N P PP
Sbjct: 320 PPASFPPPAIPPPTPGYPPPPPTYNP--NFPPPP 351
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,364,486
Number of Sequences: 237096
Number of extensions: 1620089
Number of successful extensions: 7501
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 6404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7360
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11659288620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -