Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_K11
         (903 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   6.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   8.8  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   8.8  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +1

Query: 229 VTCPFTSGAETCPSKKSILIWLKL 300
           +  PF +G   CP K+ + + L+L
Sbjct: 455 LVAPFGAGRRICPGKRFVDLALQL 478


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 8/39 (20%), Positives = 18/39 (46%)
 Frame = +3

Query: 270 EEINPDLAEAFNALPAGRSAGKDVEAAPEIPEHYSSKLN 386
           +E++  +       PAG    +DV     + ++Y + +N
Sbjct: 72  QEVHAQVYSCLARSPAGSVHSRDVNVRAVVAQYYDTDVN 110


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
 Frame = +1

Query: 142 CTNHSSCCVLFAVSSLRHAXNGSSYRKHRVTCPFTSGAETCPSKKSILI---WLKLSTLC 312
           C    S  VLF+ +S+ +    S  R   +T PFT  ++    + ++LI   W+  S + 
Sbjct: 119 CDVWRSLDVLFSTASILNLCVISLDRYWAITDPFTYPSKMSRRRAAVLIAIVWICSSAIS 178

Query: 313 PPEEA---LVKMSKQPQ-KFPNTTH 375
            P       V+  + P+ K P T H
Sbjct: 179 FPAIVWWRAVRTEEVPEDKCPFTEH 203


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,951
Number of Sequences: 438
Number of extensions: 3430
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29267238
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)