Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_K08
         (860 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0353 - 33317015-33318235,33318567-33318824,33319587-333199...    29   4.8  
01_05_0439 - 22159425-22159520,22160137-22160345,22161028-221610...    29   4.8  
09_03_0127 + 12573429-12574857,12575269-12575903                       28   8.3  

>03_06_0353 - 33317015-33318235,33318567-33318824,33319587-33319904,
            33319949-33320011,33320103-33320496,33320684-33320796,
            33320932-33321639,33321667-33323199,33323395-33323607,
            33323718-33324700,33324890-33325423,33325694-33325820,
            33326083-33326162,33327347-33327377,33327949-33328053,
            33328119-33328124,33328349-33328985,33329144-33329478,
            33330394-33331113
          Length = 2792

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
 Frame = -3

Query: 378  CIKHFLANSEEVIVGRRILCLAQQIFVA---LLLRIVNDATDN 259
            C ++ L   +   +GR + CL+Q+++     LLL +V +A DN
Sbjct: 1151 CTENSLLKKQHARLGRALHCLSQELYSQDSHLLLELVQNADDN 1193


>01_05_0439 -
           22159425-22159520,22160137-22160345,22161028-22161066,
           22161196-22161356,22161447-22161518,22162002-22162183,
           22162580-22162703,22164196-22164299,22165526-22165725,
           22165838-22166069,22166156-22166239,22166329-22166386,
           22166724-22166771,22167924-22168081,22168451-22168501,
           22168585-22168658,22168760-22168835,22169685-22169729,
           22169833-22169899,22169978-22170095,22170580-22170775,
           22171551-22171640,22171985-22172039,22172755-22172975,
           22173362-22173454,22173608-22173721,22173918-22173981,
           22174081-22174181,22174306-22174447,22174528-22174729,
           22174883-22174976,22176172-22176348
          Length = 1248

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +1

Query: 325 DSTTDDDLLRVSEEMFNADINNAFNYIQVNL 417
           D  T  D L VS EM+  D NN  +Y+Q +L
Sbjct: 673 DMLTIRDALEVSAEMYKKDPNNVQDYVQRHL 703


>09_03_0127 + 12573429-12574857,12575269-12575903
          Length = 687

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +1

Query: 214 QQGNTAQNTFQQIGTVVGGVVDYAKKKSYEDLLR 315
           Q+  TA +T   + T      + A+K  +EDLLR
Sbjct: 356 QRSGTAASTVMTLNTAAAAAAEAARKLRFEDLLR 389


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,463,676
Number of Sequences: 37544
Number of extensions: 362569
Number of successful extensions: 725
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 725
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)