Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_K07
(832 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 30 0.023
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 30 0.023
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 27 0.28
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 25 0.86
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 24 1.5
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 24 2.0
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 23 2.6
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 23 2.6
AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength rhodo... 23 3.5
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 4.6
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 22 6.0
AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier... 22 6.0
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 30.3 bits (65), Expect = 0.023
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 245 RASCHIRVGSWIHTHRHRIQIWNRGPSGKGPDQEI 349
R CHI + S+ +T R WN GP+ G E+
Sbjct: 149 RQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSNEV 183
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 30.3 bits (65), Expect = 0.023
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 245 RASCHIRVGSWIHTHRHRIQIWNRGPSGKGPDQEI 349
R CHI + S+ +T R WN GP+ G E+
Sbjct: 88 RQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSNEV 122
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 26.6 bits (56), Expect = 0.28
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -1
Query: 322 WSSIPYLYAVSMCVYPASNAYMTACSVSLVT*TTFPLGR 206
WS PY++ + C+ S A T+ + +++T T F + R
Sbjct: 115 WSHFPYVFGEAFCII-QSFAAETSANATVLTITAFTVER 152
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 25.0 bits (52), Expect = 0.86
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 245 RASCHIRVGSWIHTHRHRIQIWNRGPSGKGPDQEI 349
R CHI + S+ +T R WN G G E+
Sbjct: 149 RQLCHIEIESFGYTMRDIRYKWNAGLQSVGISNEV 183
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 24.2 bits (50), Expect = 1.5
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +2
Query: 599 RHLQL*PRTNPEDHRQRTGETFGFTDRVKPQPATTR 706
RH+++ N ++ QR FG TD + +P T +
Sbjct: 209 RHMEVIKIKNFDNCDQRINYHFGMTDNSRLEPGTNK 244
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 23.8 bits (49), Expect = 2.0
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +3
Query: 240 DTEQAVIYALEAGYTHIDTAYKYGIEDQVGRALTKKFSE 356
DT++ + GYT D YK+ QV A K S+
Sbjct: 140 DTQRCPLQFGSFGYTKRDVIYKWNSARQVAIAEDMKLSQ 178
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 23.4 bits (48), Expect = 2.6
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +1
Query: 28 GNSLRFXAIWSFHSQWTSGPV 90
G +R AIW F WT P+
Sbjct: 167 GALIRIIAIWLFSLGWTIAPM 187
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 23.4 bits (48), Expect = 2.6
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +1
Query: 28 GNSLRFXAIWSFHSQWTSGPV 90
G +R AIW F WT P+
Sbjct: 43 GALIRIIAIWLFSLGWTIAPM 63
>AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength
rhodopsin protein.
Length = 152
Score = 23.0 bits (47), Expect = 3.5
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +1
Query: 28 GNSLRFXAIWSFHSQWTSGP 87
G +R AIW F WT P
Sbjct: 133 GALIRIIAIWLFSLGWTIAP 152
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 4.6
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +3
Query: 741 VMAVHSPSGSLFPXKAQPXXPP 806
V AV SP+G P A PP
Sbjct: 398 VSAVRSPAGGQLPPSAGAPMPP 419
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 22.2 bits (45), Expect = 6.0
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +2
Query: 254 CHIRVGSWIHT 286
C I GSW+H+
Sbjct: 183 CRINFGSWVHS 193
>AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier
protein JHBP-1 protein.
Length = 253
Score = 22.2 bits (45), Expect = 6.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 573 KKLGLTKSIGISNFNQEQIQRIIDSGLEKP 662
K GLTK++ I N+N + + I+ S P
Sbjct: 94 KLYGLTKNLEIKNYNIDWDKCILSSESYNP 123
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 235,180
Number of Sequences: 438
Number of extensions: 5418
Number of successful extensions: 17
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26581563
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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