Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_K06
(914 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 33 0.38
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.50
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 32 0.50
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.50
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 32 0.66
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 32 0.66
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 31 0.87
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 0.87
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 31 1.1
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 31 1.1
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 31 1.1
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical pr... 30 2.0
AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical... 30 2.0
AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical... 30 2.0
AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical ... 30 2.0
AC024838-7|AAF60820.1| 381|Caenorhabditis elegans Hypothetical ... 30 2.0
AC024838-3|AAF60821.1| 381|Caenorhabditis elegans Hypothetical ... 30 2.0
AL132949-22|CAB70112.2| 603|Caenorhabditis elegans Hypothetical... 30 2.7
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 24 3.0
Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 29 3.5
AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAue... 29 3.5
AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical ... 29 3.5
AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical ... 29 3.5
AC024824-3|AAK85501.1| 543|Caenorhabditis elegans Hypothetical ... 29 3.5
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 29 4.6
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 29 4.6
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 24 5.2
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 24 5.3
Z81493-9|CAB04045.1| 347|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 29 6.1
AF039043-9|AAB94196.1| 427|Caenorhabditis elegans Tetraspanin f... 29 6.1
AF039043-8|AAL02514.1| 451|Caenorhabditis elegans Tetraspanin f... 29 6.1
AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical... 29 6.1
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 26 7.4
Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical pr... 28 8.1
U88172-5|AAB42260.1| 483|Caenorhabditis elegans Hypothetical pr... 28 8.1
AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical ... 28 8.1
AL117205-2|CAB55164.1| 169|Caenorhabditis elegans Hypothetical ... 28 8.1
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 28 8.1
AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase assoc... 28 8.1
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 32.7 bits (71), Expect = 0.38
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3
Query: 711 PXPPXXPPTPPPXPPXXPLPRKHXRP 788
P PP PP PPP P P P RP
Sbjct: 66 PPPPICPPPPPPPMPCPPPPPPMPRP 91
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 702 PLXPXPPXXPPTPPPXPPXXPLP 770
P+ P PP P PP PP P P
Sbjct: 69 PICPPPPPPPMPCPPPPPPMPRP 91
Score = 26.6 bits (56), Expect(2) = 5.7
Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 6/29 (20%)
Frame = +3
Query: 702 PLXPXPPXXP----PTPP--PXPPXXPLP 770
P+ P PP P P PP P PP P+P
Sbjct: 52 PVCPPPPPCPAQFCPPPPICPPPPPPPMP 80
Score = 20.6 bits (41), Expect(2) = 5.7
Identities = 7/15 (46%), Positives = 7/15 (46%)
Frame = +3
Query: 867 PXXPTXXXPXXPPPP 911
P P P PPPP
Sbjct: 72 PPPPPPPMPCPPPPP 86
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.3 bits (70), Expect = 0.50
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +3
Query: 696 YXPLXPXPPXXPPTPPPXPP 755
Y P+ P PP P PPP PP
Sbjct: 260 YPPVPPPPPSVTPMPPPMPP 279
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 32.3 bits (70), Expect = 0.50
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +3
Query: 702 PLXPXPPXXPPTPPPXPPXXPLP 770
P P PP PP PP PP P P
Sbjct: 133 PPPPPPPHYPPPPPHYPPPPPAP 155
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 711 PXPPXXPPTPPPXPPXXPLPRKHXRP 788
P P P PPP PP P P H P
Sbjct: 125 PAPYQQQPPPPPPPPHYPPPPPHYPP 150
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 711 PXPPXXPPTPPPXPPXXPLP 770
P PP PP PP PP P P
Sbjct: 132 PPPPPPPPHYPPPPPHYPPP 151
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.3 bits (70), Expect = 0.50
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +3
Query: 696 YXPLXPXPPXXPPTPPPXPP 755
Y P+ P PP P PPP PP
Sbjct: 270 YPPVPPPPPSVTPMPPPMPP 289
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 31.9 bits (69), Expect = 0.66
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 705 LXPXPPXXPPTPPPXPPXXPLP 770
+ P PP PP PPP PP P
Sbjct: 1 MPPPPPPPPPPPPPPPPAASAP 22
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +3
Query: 702 PLXPXPPXXPPTPPPXPPXXPLPRKHXRPXL 794
P P PP PP PPP P P + R L
Sbjct: 2 PPPPPPPPPPPPPPPPAASAPPPSSNARNAL 32
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 31.9 bits (69), Expect = 0.66
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 705 LXPXPPXXPPTPPPXPPXXPLP 770
+ P PP PP PPP PP P
Sbjct: 1 MPPPPPPPPPPPPPPPPAASAP 22
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +3
Query: 702 PLXPXPPXXPPTPPPXPPXXPLPRKHXRPXL 794
P P PP PP PPP P P + R L
Sbjct: 2 PPPPPPPPPPPPPPPPAASAPPPSSNARNAL 32
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 31.5 bits (68), Expect = 0.87
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 696 YXPLXPXPPXXPPTPPPXPP 755
Y P PP PP PPP PP
Sbjct: 130 YIEAPPPPPSPPPPPPPPPP 149
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.5 bits (68), Expect = 0.87
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 702 PLXPXPPXXPPTPPPXPPXXPLP 770
P+ P PP PP P PP P+P
Sbjct: 60 PMCPPPPPPPPPPMCPPPPPPMP 82
Score = 30.3 bits (65), Expect = 2.0
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 711 PXPPXXPPTPPPXPP 755
P PP PP PPP PP
Sbjct: 57 PPPPMCPPPPPPPPP 71
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 711 PXPPXXPPTPPPXPPXXPLP 770
P P PP PPP PP P P
Sbjct: 58 PPPMCPPPPPPPPPPMCPPP 77
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 702 PLXPXPPXXPPTPPPXPPXXP 764
P P PP PP PPP P P
Sbjct: 66 PPPPPPPMCPPPPPPMPSYSP 86
Score = 27.1 bits (57), Expect(2) = 4.5
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 717 PPXXPPTPPPXPPXXPLP 770
PP PP PPP PLP
Sbjct: 27 PPPCPPPPPPMCAPPPLP 44
Score = 20.6 bits (41), Expect(2) = 4.5
Identities = 7/15 (46%), Positives = 7/15 (46%)
Frame = +3
Query: 867 PXXPTXXXPXXPPPP 911
P P P PPPP
Sbjct: 57 PPPPMCPPPPPPPPP 71
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +3
Query: 702 PLXPXPPXXPPTPPPXPPXXPLPRKHXRPXLA 797
PL P PP PPP PP L P LA
Sbjct: 238 PLPPVGAGAPPPPPPPPPPAQLMASSGTPSLA 269
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +3
Query: 702 PLXPXPPXXPPTPPPXPPXXPLPRKHXRPXLA 797
PL P PP PPP PP L P LA
Sbjct: 224 PLPPVGAGAPPPPPPPPPPAQLMASSGTPSLA 255
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +3
Query: 702 PLXPXPPXXPPTPPPXPPXXPLPRKHXRPXLA 797
PL P PP PPP PP L P LA
Sbjct: 224 PLPPVGAGAPPPPPPPPPPAQLMASSGTPSLA 255
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 30.3 bits (65), Expect = 2.0
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 711 PXPPXXPPTPPPXPP 755
P PP PP PPP PP
Sbjct: 355 PAPPPPPPPPPPPPP 369
Score = 29.9 bits (64), Expect = 2.7
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 717 PPXXPPTPPPXPPXXP 764
PP PP PPP PP P
Sbjct: 354 PPAPPPPPPPPPPPPP 369
Score = 29.9 bits (64), Expect = 2.7
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 717 PPXXPPTPPPXPPXXP 764
PP PP PPP PP P
Sbjct: 358 PPPPPPPPPPPPPQTP 373
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 702 PLXPXPPXXPPTPPPXPPXXP 764
P+ P PP PPP PP P
Sbjct: 350 PIISPPAPPPPPPPPPPPPPP 370
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 720 PXXPPTPPPXPPXXPLPR 773
P PP PPP PP P P+
Sbjct: 354 PPAPPPPPPPPPPPPPPQ 371
Score = 28.7 bits (61), Expect = 6.1
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +3
Query: 705 LXPXPPXXPPTPPPXPPXXPLP 770
+ P P PP PPP PP P
Sbjct: 352 ISPPAPPPPPPPPPPPPPPQTP 373
>Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +3
Query: 702 PLXPXPPXXPPTPPPXPPXXPLPRKHXR 785
P P PP PPP PP P+ R+ R
Sbjct: 241 PEPPREKSVPPPPPPPPPPKPVSREPSR 268
>Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +3
Query: 702 PLXPXPPXXPPTPPPXPPXXPLPRKHXR 785
P P PP PPP PP P+ R+ R
Sbjct: 256 PEPPREKSVPPPPPPPPPPKPVSREPSR 283
>AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +3
Query: 702 PLXPXPPXXPPTPPPXPPXXPLPRKHXR 785
P P PP PPP PP P+ R+ R
Sbjct: 241 PEPPREKSVPPPPPPPPPPKPVSREPSR 268
>AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +3
Query: 702 PLXPXPPXXPPTPPPXPPXXPLPRKHXR 785
P P PP PPP PP P+ R+ R
Sbjct: 256 PEPPREKSVPPPPPPPPPPKPVSREPSR 283
>AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical
protein F56E10.2 protein.
Length = 813
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 711 PXPPXXPPTPPPXPPXXPLP 770
P PP PP PP PP P P
Sbjct: 318 PSPPLLPPVCPPAPPPPPPP 337
>AC024838-7|AAF60820.1| 381|Caenorhabditis elegans Hypothetical
protein Y59E9AL.2 protein.
Length = 381
Score = 30.3 bits (65), Expect = 2.0
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 711 PXPPXXPPTPPPXPP 755
P PP PP PPP PP
Sbjct: 182 PKPPPPPPIPPPGPP 196
>AC024838-3|AAF60821.1| 381|Caenorhabditis elegans Hypothetical
protein Y59E9AL.3 protein.
Length = 381
Score = 30.3 bits (65), Expect = 2.0
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 711 PXPPXXPPTPPPXPP 755
P PP PP PPP PP
Sbjct: 182 PKPPPPPPIPPPGPP 196
>AL132949-22|CAB70112.2| 603|Caenorhabditis elegans Hypothetical
protein Y53F4B.25 protein.
Length = 603
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 702 PLXPXPPXXPPTPPPXPPXXPL 767
P P PP PPT PP P P+
Sbjct: 450 PRLPQPPTAPPTVPPPPNQAPI 471
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 24.2 bits (50), Expect(2) = 3.0
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +3
Query: 729 PPTPPPXPPXXPLP 770
PP PPP PP P
Sbjct: 85 PPPPPPPPPTLKAP 98
Score = 23.8 bits (49), Expect(2) = 3.0
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 702 PLXPXPPXXPPTPPPXPP 755
PL PP PPP PP
Sbjct: 75 PLISILQQAPPPPPPPPP 92
>Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical
protein W01G7.1 protein.
Length = 627
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 711 PXPPXXPPTPPPXPPXXPL 767
P PP PP PPP P P+
Sbjct: 513 PLPPLPPPPPPPKPKPAPV 531
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 720 PXXPPTPPPXPPXXPLP 770
P PP PPP PP P P
Sbjct: 512 PPLPPLPPPPPPPKPKP 528
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = +3
Query: 696 YXPLXPXPPXXP-PTPPPXPPXXPLPRKHXRP 788
Y P P PP P P P P P P P+ +P
Sbjct: 95 YVPPPPPPPTQPEPEPEPRPEPQPEPQPEPQP 126
>AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAuer
Formation DAF-5,a Ski oncogene homolog involved in a
neuronal TGF betapathway (71.0 kD) (daf-5) protein.
Length = 627
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 711 PXPPXXPPTPPPXPPXXPL 767
P PP PP PPP P P+
Sbjct: 513 PLPPLPPPPPPPKPKPAPV 531
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 720 PXXPPTPPPXPPXXPLP 770
P PP PPP PP P P
Sbjct: 512 PPLPPLPPPPPPPKPKP 528
>AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical
protein Y48B6A.6b protein.
Length = 533
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 711 PXPPXXPPTPPPXPPXXPLP 770
P PP PPP PP PLP
Sbjct: 254 PVPPPVLSIPPPPPPNIPLP 273
>AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical
protein Y48B6A.6a protein.
Length = 687
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 711 PXPPXXPPTPPPXPPXXPLP 770
P PP PPP PP PLP
Sbjct: 254 PVPPPVLSIPPPPPPNIPLP 273
>AC024824-3|AAK85501.1| 543|Caenorhabditis elegans Hypothetical
protein Y55B1BR.1 protein.
Length = 543
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 696 YXPLXPXPPXXPPTPPPXPPXXPLPR 773
Y P P PP PP PP P P R
Sbjct: 123 YLPPPPRPPPVPPLSPPERPDIPHAR 148
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 3/26 (11%)
Frame = +3
Query: 702 PLXPXPPXXP---PTPPPXPPXXPLP 770
P P P P PTPPP PP P P
Sbjct: 557 PREPTPEPEPVREPTPPPPPPAKPRP 582
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 711 PXPPXXPPTPPPXPPXXP 764
P P PP PPP PP P
Sbjct: 135 PPTPAAPPPPPPPPPPAP 152
Score = 28.3 bits (60), Expect = 8.1
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 711 PXPPXXPPTPPPXPPXXPLP 770
P P PP PPP PP P
Sbjct: 136 PTPAAPPPPPPPPPPAPEAP 155
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 24.2 bits (50), Expect(2) = 5.2
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +3
Query: 705 LXPXPPXXPPTPPPXPP 755
+ P PP PPP PP
Sbjct: 622 MAPISSAAPPPPPPPPP 638
Score = 23.0 bits (47), Expect(2) = 5.2
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +3
Query: 732 PTPPPXPPXXPLP 770
P PPP PP LP
Sbjct: 630 PPPPPPPPPMGLP 642
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 24.2 bits (50), Expect(2) = 5.3
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +3
Query: 705 LXPXPPXXPPTPPPXPP 755
+ P PP PPP PP
Sbjct: 448 MAPISSAAPPPPPPPPP 464
Score = 23.0 bits (47), Expect(2) = 5.3
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +3
Query: 732 PTPPPXPPXXPLP 770
P PPP PP LP
Sbjct: 456 PPPPPPPPPMGLP 468
>Z81493-9|CAB04045.1| 347|Caenorhabditis elegans Hypothetical
protein F01D5.10 protein.
Length = 347
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 717 PPXXPPTPPPXPPXXPLPRKHXR 785
PP P TPPP PP LP ++ R
Sbjct: 12 PPPLPTTPPP-PPVGELPTQYKR 33
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 702 PLXPXPPXXPPTPPPXPPXXPLP 770
P P P PP PPP P P P
Sbjct: 243 PPPPSPVCMPPPPPPCPMPIPCP 265
>AF039043-9|AAB94196.1| 427|Caenorhabditis elegans Tetraspanin
family protein 14,isoform a protein.
Length = 427
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 720 PXXPPTPPPXPPXXPLPRKHXR 785
P P PPP PP +PRK R
Sbjct: 339 PRPPDIPPPLPPIEHVPRKKSR 360
>AF039043-8|AAL02514.1| 451|Caenorhabditis elegans Tetraspanin
family protein 14,isoform b protein.
Length = 451
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 720 PXXPPTPPPXPPXXPLPRKHXR 785
P P PPP PP +PRK R
Sbjct: 363 PRPPDIPPPLPPIEHVPRKKSR 384
>AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical
protein W03F11.4 protein.
Length = 1406
Score = 28.7 bits (61), Expect = 6.1
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 702 PLXPXPPXXPPTPPPXP 752
PL PP PP PPP P
Sbjct: 821 PLSTLPPPPPPNPPPAP 837
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 25.8 bits (54), Expect(2) = 7.4
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +3
Query: 702 PLXPXPPXXPPTPPPXPPXXPLP 770
P P P PP PP P P P
Sbjct: 82 PYVPPAPLPPPPPPASPCCGPSP 104
Score = 21.0 bits (42), Expect(2) = 7.4
Identities = 7/15 (46%), Positives = 7/15 (46%)
Frame = +3
Query: 867 PXXPTXXXPXXPPPP 911
P P P PPPP
Sbjct: 111 PPPPAPAAPCCPPPP 125
>Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical
protein Y57G11C.9b protein.
Length = 625
Score = 28.3 bits (60), Expect = 8.1
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 711 PXPPXXPPTPPPXPPXXPLP 770
P PP P PP PP P P
Sbjct: 410 PIPPQLPTAPPQPPPTTPQP 429
>U88172-5|AAB42260.1| 483|Caenorhabditis elegans Hypothetical
protein ZK354.8 protein.
Length = 483
Score = 28.3 bits (60), Expect = 8.1
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 705 LXPXPPXXPPTPPPXPPXXPLPR 773
+ P P PP PPP P P P+
Sbjct: 90 MLPPPSDPPPPPPPVAPHQPPPQ 112
>AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical
protein Y56A3A.6 protein.
Length = 798
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +3
Query: 717 PPXXPPTPPPXPPXXPLPRKHXRPXL 794
P PP PPP PP P + P L
Sbjct: 750 PSSTPPPPPPPPPLAAAPPQPKNPDL 775
>AL117205-2|CAB55164.1| 169|Caenorhabditis elegans Hypothetical
protein Y116A8A.2 protein.
Length = 169
Score = 28.3 bits (60), Expect = 8.1
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 105 PSLSASTVPEFKTTPVDAAFVEKQKKIL 188
P + +T+PE+++ P A E KKI+
Sbjct: 34 PPIKRNTIPEYQSVPPGAVITEPAKKII 61
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform a protein.
Length = 1256
Score = 28.3 bits (60), Expect = 8.1
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 702 PLXPXPPXXPPTPPPXPP 755
P P P PP PPP PP
Sbjct: 1003 PKAPAGPGGPPPPPPPPP 1020
>AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform b protein.
Length = 495
Score = 28.3 bits (60), Expect = 8.1
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 702 PLXPXPPXXPPTPPPXPP 755
P P P PP PPP PP
Sbjct: 242 PKAPAGPGGPPPPPPPPP 259
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,037,336
Number of Sequences: 27780
Number of extensions: 281124
Number of successful extensions: 2905
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2323
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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