Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_K03
(844 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 39 0.001
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 36 0.007
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 36 0.007
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 35 0.017
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.36
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 29 0.62
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 25 0.73
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 0.82
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 28 1.4
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 3.3
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 27 4.4
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 38.7 bits (86), Expect = 0.001
Identities = 21/57 (36%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Frame = +2
Query: 560 PPPPXXGXXXXGXXXXP-PPPPPXPXXXXXPXPXPXXPXXXPXXXXXXPPPPXXPPP 727
PPPP P P PPP P P P P P PPPP PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP-----PPGVAGAGPPPPPPPPP 783
Score = 35.1 bits (77), Expect = 0.013
Identities = 21/59 (35%), Positives = 21/59 (35%)
Frame = +2
Query: 557 PPPPPXXGXXXXGXXXXPPPPPPXPXXXXXPXPXPXXPXXXPXXXXXXPPPPXXPPPXP 733
PPPPP P PPP P P P P P PPP PPP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP-----PGVAGAGPPP---PPPPP 782
Score = 33.5 bits (73), Expect = 0.038
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +2
Query: 557 PPPPPXXGXXXXGXXXXPPPPPPXP 631
PPPPP G G PPPPPP P
Sbjct: 762 PPPPPPPGVAGAG---PPPPPPPPP 783
Score = 32.7 bits (71), Expect = 0.067
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = +2
Query: 557 PPPPPXXGXXXXGXXXXPPPPPPXPXXXXXPXPXPXXPXXXPXXXXXXPPPPXXPP 724
PPP P G PPPPPP P P P P P P P
Sbjct: 752 PPPAPIMGGPP------PPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEP 801
Score = 29.5 bits (63), Expect = 0.62
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = +2
Query: 557 PPPPPXXGXXXXGXXXXPPPPPPXPXXXXXPXPXPXXPXXXPXXXXXXPPPPXXPPP 727
P PPP G PPPPP P P P P P P P
Sbjct: 750 PVPPPAP---IMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 35.9 bits (79), Expect = 0.007
Identities = 22/68 (32%), Positives = 22/68 (32%)
Frame = -2
Query: 732 GXGGGXXGGGGXXXXXXGXXXGXXGXGXGXXXXXGXGGGGGGXXXXPXXXXPXXGGGGGX 553
G GG GG G G G G G GGG GG P GG GG
Sbjct: 191 GGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGG 250
Query: 552 XXXXXGXP 529
G P
Sbjct: 251 LGGFGGGP 258
Score = 34.3 bits (75), Expect = 0.022
Identities = 20/59 (33%), Positives = 20/59 (33%)
Frame = -2
Query: 732 GXGGGXXGGGGXXXXXXGXXXGXXGXGXGXXXXXGXGGGGGGXXXXPXXXXPXXGGGGG 556
G GG GG G G G G G G GG GGG GG GG
Sbjct: 188 GGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
Score = 32.7 bits (71), Expect = 0.067
Identities = 25/84 (29%), Positives = 25/84 (29%)
Frame = -2
Query: 843 GGGXXXXXGXXGGXXGGXXXXXXXXXXGXXXXXXXXXGXGGGXXGGGGXXXXXXGXXXGX 664
GGG G GG G G G GG GG G G
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
Query: 663 XGXGXGXXXXXGXGGGGGGXXXXP 592
G G G G GGG GG P
Sbjct: 247 FGGGLG-----GFGGGPGGFGGGP 265
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 35.9 bits (79), Expect = 0.007
Identities = 23/74 (31%), Positives = 23/74 (31%), Gaps = 2/74 (2%)
Frame = +2
Query: 518 PPXGGXPXXXXXXPP--PPPXXGXXXXGXXXXPPPPPPXPXXXXXPXPXPXXPXXXPXXX 691
PP P PP PP G PP PP P P P P P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPP--- 471
Query: 692 XXXPPPPXXPPPXP 733
P PP P P P
Sbjct: 472 -AAPAPPPAPAPAP 484
Score = 33.5 bits (73), Expect = 0.038
Identities = 26/96 (27%), Positives = 26/96 (27%)
Frame = +2
Query: 557 PPPPPXXGXXXXGXXXXPPPPPPXPXXXXXPXPXPXXPXXXPXXXXXXPPPPXXPPPXPX 736
PPP PPPPP P P P PPPP PPP
Sbjct: 293 PPPSSRVSAAALAANKKRPPPPPPPSRRNRGKP----PIGNGSSNSSLPPPP--PPPRSN 346
Query: 737 XXXXXXXXPXXXXXXXXXXPPXXPPXXPXXXXXPPP 844
P PP P P PPP
Sbjct: 347 AAGSIPLPP----QGRSAPPPPPPRSAPSTGRQPPP 378
Score = 33.1 bits (72), Expect = 0.051
Identities = 27/106 (25%), Positives = 27/106 (25%), Gaps = 5/106 (4%)
Frame = +2
Query: 518 PPXGGXPXXXXXXPPPPPXXGXXXXGXXXXPP-----PPPPXPXXXXXPXPXPXXPXXXP 682
PP G PPPPP G PP PPPP P P P
Sbjct: 325 PPIGNGSSNSSLPPPPPPPRS-NAAGSIPLPPQGRSAPPPPPPRSAPSTGRQP-PPLSSS 382
Query: 683 XXXXXXPPPPXXPPPXPXXXXXXXXXPXXXXXXXXXXPPXXPPXXP 820
P PP P PP PP P
Sbjct: 383 RAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAP 428
Score = 31.1 bits (67), Expect = 0.20
Identities = 19/68 (27%), Positives = 19/68 (27%), Gaps = 6/68 (8%)
Frame = +1
Query: 520 PPXGXXXXXXXXXPPPPXXXXXXXGXXXXP------PPPPPPXXXXXXXXPXPXXXXXXX 681
PP G PPPP G P PPPPPP P
Sbjct: 325 PPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRA 384
Query: 682 XPXPXXPP 705
P PP
Sbjct: 385 VSNPPAPP 392
Score = 30.7 bits (66), Expect = 0.27
Identities = 30/125 (24%), Positives = 31/125 (24%), Gaps = 3/125 (2%)
Frame = +2
Query: 368 PPPXWXXXXXGGXXRPQKXXKXPPPPXXXXXXXXXXXXXXXXXXFXXXXXPPXGGXPXXX 547
PPP G P + PPPP P P
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSS--RAVSNPPAPPPAIP 396
Query: 548 XXXPPPPPXXGXXXXGXXXXPPPPPPXPXXXXXPXPXPXXPXXXPXXXXXXPP-PPXXP- 721
P P G P PP P P P P P PP PP P
Sbjct: 397 GRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLP-PSAPPSLPMGAPAAPPLPPSAPI 455
Query: 722 -PPXP 733
PP P
Sbjct: 456 APPLP 460
Score = 29.1 bits (62), Expect = 0.82
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +1
Query: 607 PPPPPPPXXXXXXXXPXPXXXXXXXXPXPXXPP 705
PPPPPPP P P P PP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 29.1 bits (62), Expect = 0.82
Identities = 19/80 (23%), Positives = 19/80 (23%), Gaps = 1/80 (1%)
Frame = +1
Query: 607 PPPPPPPXXXXXXXXP-XPXXXXXXXXPXPXXPPXPXXXPPXXXXXXXXXXXPXXXXXXX 783
PPPPPPP P P P P P PP P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Query: 784 XXXXPPXXPXXXXXXXXPPP 843
P P PP
Sbjct: 397 GRSAPALPPLGNASRTSTPP 416
Score = 29.1 bits (62), Expect = 0.82
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +2
Query: 557 PPPPPXXGXXXXGXXXXPPPPPPXPXXXXXPXPXPXXP 670
PP P G PP PP P P P P P
Sbjct: 450 PPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 28.3 bits (60), Expect = 1.4
Identities = 25/122 (20%), Positives = 26/122 (21%), Gaps = 2/122 (1%)
Frame = +1
Query: 367 PPPPLXGXXXXGGKXP-PKNXKXXPPPXXPXXGGEKXXXXXXXXXXXTXXXXPPXGXXXX 543
PPPP G P P + PPP P P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Query: 544 XXXXXPPPPXXXXXXXGXXXXPPPPP-PPXXXXXXXXPXPXXXXXXXXPXPXXPPXPXXX 720
PP P PP PP P P PP
Sbjct: 397 GRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIA 456
Query: 721 PP 726
PP
Sbjct: 457 PP 458
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 34.7 bits (76), Expect = 0.017
Identities = 26/108 (24%), Positives = 26/108 (24%), Gaps = 1/108 (0%)
Frame = +2
Query: 521 PXGGXPXXXXXXPPPPPXXGXXXXGXXXXPPP-PPPXPXXXXXPXPXPXXPXXXPXXXXX 697
P P PP P G PPP P P P P P P
Sbjct: 1037 PSTAPPVPIPTSTPPVPKSSS---GAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPP 1093
Query: 698 XPPPPXXPPPXPXXXXXXXXXPXXXXXXXXXXPPXXPPXXPXXXXXPP 841
P P PP P P P P P PP
Sbjct: 1094 VPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPP 1141
Score = 34.7 bits (76), Expect = 0.017
Identities = 24/98 (24%), Positives = 24/98 (24%), Gaps = 2/98 (2%)
Frame = +2
Query: 557 PPPPPXXGXXXXGXXXXPPPPPPXPXXXXXPXPXPXXPXXXPXXXXXXPPPPXXP--PPX 730
PP P G PP P P P P P P PP P PP
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPV 1142
Query: 731 PXXXXXXXXXPXXXXXXXXXXPPXXPPXXPXXXXXPPP 844
P P P P P PP
Sbjct: 1143 PKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPP 1180
Score = 34.3 bits (75), Expect = 0.022
Identities = 26/106 (24%), Positives = 26/106 (24%), Gaps = 3/106 (2%)
Frame = +2
Query: 536 PXXXXXXPPPPPXXGXXXXGXXXXPPPPPPXPXXXXXPXPXPXX---PXXXPXXXXXXPP 706
P PP P G PP P P P P P P P P
Sbjct: 1105 PKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAP-PVPKPSVAAPPVPAPSGAPPVPK 1163
Query: 707 PPXXPPPXPXXXXXXXXXPXXXXXXXXXXPPXXPPXXPXXXXXPPP 844
P PP P P PP P P PP
Sbjct: 1164 PSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP 1209
Score = 33.1 bits (72), Expect = 0.051
Identities = 21/80 (26%), Positives = 21/80 (26%), Gaps = 3/80 (3%)
Frame = +2
Query: 614 PPPPXPXXXXXPXPXPXX---PXXXPXXXXXXPPPPXXPPPXPXXXXXXXXXPXXXXXXX 784
PP P P P P P P P PPP PP P P
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Query: 785 XXXPPXXPPXXPXXXXXPPP 844
P P P PP
Sbjct: 1219 VPTPSAGLPPVPVPTAKAPP 1238
Score = 31.9 bits (69), Expect = 0.12
Identities = 21/82 (25%), Positives = 21/82 (25%), Gaps = 6/82 (7%)
Frame = +2
Query: 614 PPPPXPXXXXXPXPXPXXPXXXPXXXXXXPPP------PXXPPPXPXXXXXXXXXPXXXX 775
PP P P P P P P P P P PPP P P
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSG 1081
Query: 776 XXXXXXPPXXPPXXPXXXXXPP 841
P PP PP
Sbjct: 1082 APPVPAPSGIPPVPKPSVAAPP 1103
Score = 31.5 bits (68), Expect = 0.15
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +2
Query: 608 PPPPPPXPXXXXXPXPXPXXPXXXPXXXXXXPPPPXXPPPXP 733
PP P P P P P P PPP PP P
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVP 1220
Score = 28.3 bits (60), Expect = 1.4
Identities = 18/69 (26%), Positives = 18/69 (26%), Gaps = 3/69 (4%)
Frame = +2
Query: 536 PXXXXXXPPPPPXXGXXXXGXXXXPPPPPPXPXXXXXPXPXPXXPXXXPXXXXXXPP--- 706
P PP P PP P P P P P P PP
Sbjct: 1172 PAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPV 1231
Query: 707 PPXXPPPXP 733
P PP P
Sbjct: 1232 PTAKAPPVP 1240
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 30.3 bits (65), Expect = 0.36
Identities = 20/73 (27%), Positives = 20/73 (27%), Gaps = 3/73 (4%)
Frame = +2
Query: 518 PPXGGXPXXXXXXPPP---PPXXGXXXXGXXXXPPPPPPXPXXXXXPXPXPXXPXXXPXX 688
PP P P P PP PPP P P P P P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSA-PSLPSAVPPM 197
Query: 689 XXXXPPPPXXPPP 727
PPPP P
Sbjct: 198 PPKVPPPPLSQAP 210
Score = 29.9 bits (64), Expect = 0.47
Identities = 21/80 (26%), Positives = 21/80 (26%), Gaps = 2/80 (2%)
Frame = +2
Query: 611 PPPPPXPXXXXXPXPXPXXPXXXPXXXXXXPPPPXXPPPXP--XXXXXXXXXPXXXXXXX 784
P PP P P P P PP P PP P P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSA 187
Query: 785 XXXPPXXPPXXPXXXXXPPP 844
P PP P PPP
Sbjct: 188 PSLPSAVPPMPP--KVPPPP 205
Score = 27.1 bits (57), Expect = 3.3
Identities = 16/58 (27%), Positives = 16/58 (27%), Gaps = 2/58 (3%)
Frame = +1
Query: 559 PPPPXXXXXXXGXXXXPPPP--PPPXXXXXXXXPXPXXXXXXXXPXPXXPPXPXXXPP 726
P PP PP P PPP P P P P P PP
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPP 185
Score = 25.8 bits (54), Expect = 7.7
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 609 PPPPPPXPXXXXXXXXPP 662
PPPPPP P PP
Sbjct: 5 PPPPPPAPAPAAAAPAPP 22
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 29.5 bits (63), Expect = 0.62
Identities = 24/97 (24%), Positives = 24/97 (24%), Gaps = 2/97 (2%)
Frame = +2
Query: 560 PPPPXXGXXXXGXXXXPPPPPPXPXXXXXPXPXPXXP--XXXPXXXXXXPPPPXXPPPXP 733
PPPP G PPP P P P P P P PPP
Sbjct: 208 PPPPMH--HKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMH 265
Query: 734 XXXXXXXXXPXXXXXXXXXXPPXXPPXXPXXXXXPPP 844
P PP P PPP
Sbjct: 266 HEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 302
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 24.6 bits (51), Expect(2) = 0.73
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +2
Query: 569 PXXGXXXXGXXXXPPPPPP 625
P G G PPPPPP
Sbjct: 295 PSSGDSANGGLPPPPPPPP 313
Score = 23.0 bits (47), Expect(2) = 0.73
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 701 PPPPXXPPP 727
PPPP PPP
Sbjct: 306 PPPPPPPPP 314
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.1 bits (62), Expect = 0.82
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 557 PPPPPXXGXXXXGXXXXPPPPPP 625
PPPPP G PPPPPP
Sbjct: 10 PPPPPPPGFEPPS--QPPPPPPP 30
Score = 27.9 bits (59), Expect = 1.9
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +2
Query: 608 PPPPPPXPXXXXXPXPXPXXP 670
PPPPPP P P P P
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPP 29
Score = 27.1 bits (57), Expect = 3.3
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 562 PPPXXXXXXXGXXXXPPPPPPP 627
PPP PPPPPPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 26.6 bits (56), Expect = 4.4
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 557 PPPPPXXGXXXXGXXXXPPPPP 622
PPPPP PPPPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 28.3 bits (60), Expect = 1.4
Identities = 17/67 (25%), Positives = 17/67 (25%)
Frame = +2
Query: 527 GGXPXXXXXXPPPPPXXGXXXXGXXXXPPPPPPXPXXXXXPXPXPXXPXXXPXXXXXXPP 706
G P PP P PPPPP P P P P
Sbjct: 1680 GMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASS 1739
Query: 707 PPXXPPP 727
P P P
Sbjct: 1740 APSVPNP 1746
Score = 27.5 bits (58), Expect = 2.5
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +2
Query: 611 PPPPPXPXXXXXPXPXPXXPXXXPXXXXXXPPPPXXPPPXP 733
P PPP P P P P P PPPP P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPS----APPPPLPASSAP 1741
Score = 25.8 bits (54), Expect = 7.7
Identities = 15/53 (28%), Positives = 15/53 (28%), Gaps = 5/53 (9%)
Frame = +2
Query: 518 PPXGGXPXXXXXXPPPPPXXGXXXXGXXXXP-----PPPPPXPXXXXXPXPXP 661
P P PPPPP P PPPP P P P
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.1 bits (57), Expect = 3.3
Identities = 19/65 (29%), Positives = 19/65 (29%), Gaps = 6/65 (9%)
Frame = +2
Query: 557 PPPPPXXGXXXXGXXXXPPPPP----PXPXXXXXPXPXPXXPXXXPXXXXXXPPPPXXP- 721
P PP PPPPP P P P PPPP P
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPS 280
Query: 722 -PPXP 733
PP P
Sbjct: 281 QPPRP 285
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 26.6 bits (56), Expect = 4.4
Identities = 18/59 (30%), Positives = 18/59 (30%)
Frame = -2
Query: 732 GXGGGXXGGGGXXXXXXGXXXGXXGXGXGXXXXXGXGGGGGGXXXXPXXXXPXXGGGGG 556
G GG G G G G G G G G GG GG G GG
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGG-GRGGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
Score = 25.8 bits (54), Expect = 7.7
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -2
Query: 732 GXGGGXXGGGGXXXXXXGXXXGXXGXGXGXXXXXGXGGGGGG 607
G GGG GG G G G G G GG GG
Sbjct: 27 GFGGGR--GGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,215,417
Number of Sequences: 5004
Number of extensions: 41648
Number of successful extensions: 440
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 180
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 416455520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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