Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_K02
         (886 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical pro...    39   6e-05
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          25   0.79 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   1.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   1.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.4  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    23   3.2  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   3.2  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           23   3.2  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    22   5.6  

>AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical
           protein protein.
          Length = 95

 Score = 38.7 bits (86), Expect = 6e-05
 Identities = 16/25 (64%), Positives = 19/25 (76%)
 Frame = +3

Query: 414 FNTXVRXEERYKSGKNKWFFQKLRF 488
           F T V+ +E  KSG+NKWFFQK RF
Sbjct: 71  FQTRVKVQEGSKSGRNKWFFQKGRF 95


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 25.0 bits (52), Expect = 0.79
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 503 KXNXRYVSNDPXXPXPPPPP 562
           K +  Y+S +   P PPPPP
Sbjct: 718 KESISYLSMENNAPPPPPPP 737



 Score = 23.8 bits (49), Expect = 1.8
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +1

Query: 547 PPPPPPP 567
           PPPPPPP
Sbjct: 731 PPPPPPP 737


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 550 PPPPPPXXXPXQSPXG 597
           PPPP P   P ++P G
Sbjct: 736 PPPPHPHHQPPRNPVG 751


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 550 PPPPPPXXXPXQSPXG 597
           PPPP P   P ++P G
Sbjct: 628 PPPPHPHHQPPRNPVG 643


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -3

Query: 146  DPRTGHLGPALLYPASLF 93
            D +TGH+ P   YP  ++
Sbjct: 2520 DKQTGHVAPLYYYPGDVY 2537


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +3

Query: 180 VPPTSHTGMPSSLVSTGTPGKCTRGWERIKST 275
           +P T H GM  SL    +PG C  G   ++ T
Sbjct: 372 LPETMHMGMGPSLTPLASPG-CGPGQGGLQPT 402


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 290 KPFVKVVNYNHLMPTRY 340
           K F  +VN  HL+ T+Y
Sbjct: 83  KNFTNIVNLTHLLETQY 99


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +3

Query: 180 VPPTSHTGMPSSLVSTGTPGKCTRGWERIKST 275
           +P T H GM  SL    +PG C  G   ++ T
Sbjct: 372 LPETMHMGMGPSLTPLASPG-CGPGQGGLQPT 402


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +2

Query: 794 TIXLHFYRSPXPPXPXXPPFFP 859
           TI L  +  P  P P   PF+P
Sbjct: 193 TIALGAFYQPLQPFPPPYPFYP 214


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,531
Number of Sequences: 336
Number of extensions: 3370
Number of successful extensions: 18
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24513621
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)