Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_J24
(919 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC11E10.01 ||SPCC61.06|cystathionine beta-lyase |Schizosacchar... 46 6e-06
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 35 0.019
SPBC428.11 |||homocysteine synthase |Schizosaccharomyces pombe|c... 33 0.057
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 33 0.057
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 32 0.13
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 30 0.40
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 30 0.53
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 1.2
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 26 8.6
>SPCC11E10.01 ||SPCC61.06|cystathionine beta-lyase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 390
Score = 46.4 bits (105), Expect = 6e-06
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Frame = +3
Query: 189 TIAIHAGQEPEKWNSAAVVTPIVTSTTFKQPXPXEHTG-FEYGRSGNPTRNTLXXCLAAL 365
T +H +++++++V PI S TFKQP EH G F+Y RSGNPTR+ L LA L
Sbjct: 11 TELVHVEGNEDQYHASSV--PIYQSATFKQPC-LEHMGKFDYTRSGNPTRSVLQVHLAKL 67
Query: 366 XR 371
+
Sbjct: 68 MK 69
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 34.7 bits (76), Expect = 0.019
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +1
Query: 670 PXPPXPPXFXPPXHNPPPP 726
P PP PP F PP PPPP
Sbjct: 10 PPPPPPPGFEPPSQPPPPP 28
Score = 26.2 bits (55), Expect = 6.5
Identities = 11/32 (34%), Positives = 12/32 (37%)
Frame = +2
Query: 716 PPPPXXPSXXPXXXXXXRPPPXPXPRRAXXPP 811
PPPP P P PPP +R P
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPPGYVKKRKNKTP 41
Score = 25.8 bits (54), Expect = 8.6
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +1
Query: 700 PPXHNPPPPXXPFXXPP 750
PP + PPPP P PP
Sbjct: 5 PPGNPPPPPPPPGFEPP 21
>SPBC428.11 |||homocysteine synthase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 429
Score = 33.1 bits (72), Expect = 0.057
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Frame = +3
Query: 183 FATIAIHAGQEPEKWNSAAVVTPIVTSTTF--------KQPXPXEHTGFEYGRSGNPTRN 338
F T+ +HAGQEP+ S+ V PI +T++ + + G+ Y R NPT +
Sbjct: 8 FETLQLHAGQEPDAATSSRAV-PIYATTSYVFRDCDHGGRLFGLQEPGYIYSRMMNPTAD 66
Query: 339 TLXXCLAAL 365
+AAL
Sbjct: 67 VFEKRIAAL 75
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.1 bits (72), Expect = 0.057
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +2
Query: 713 TPPPPXXPSXXPXXXXXXRPPPXPXPRRAXXPPPTPXPXXRXPXP 847
+PPPP P P P P P PPP P P P
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGP 775
Score = 32.7 bits (71), Expect = 0.075
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +2
Query: 713 TPPPPXXPSXXPXXXXXXRPPPXPXPRRAXXPPPTPXP 826
TP P P P PPP P P A PP P P
Sbjct: 743 TPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 31.1 bits (67), Expect = 0.23
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +2
Query: 716 PPPPXXPSXXPXXXXXXRPPPXPXPRRAXXPPPTPXPXXRXPXP 847
PPPP P PPP P PPP P P P
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPP 777
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +1
Query: 670 PXPPXPPXFXPPXHNPPPPXXPFXXPP 750
P PP P P PPPP PP
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPP 776
Score = 26.2 bits (55), Expect = 6.5
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 670 PXPPXPPXFXPPXHNPPPPXXP 735
P PP PP PPPP P
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPPP 783
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 31.9 bits (69), Expect = 0.13
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = -2
Query: 855 RNXGXGXRXXGXGVGGGXXARRGXGXGGGRXXXXXXGXXEGXXGGGGVVXXGXK 694
R G G GGG RG G GG R G G GG G K
Sbjct: 15 RGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAK 68
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 30.3 bits (65), Expect = 0.40
Identities = 19/68 (27%), Positives = 20/68 (29%)
Frame = +2
Query: 716 PPPPXXPSXXPXXXXXXRPPPXPXPRRAXXPPPTPXPXXRXPXPXFLXXXXXXXXXXXPX 895
P PP P P PP P A PP P P P +
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPA-APPLPPSAPIAPPLPAGMPAAPPLPPAAPAP 476
Query: 896 PPXXAPXP 919
PP AP P
Sbjct: 477 PPAPAPAP 484
Score = 29.1 bits (62), Expect = 0.92
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +2
Query: 716 PPPPXXPSXXPXXXXXXRPPPXPXPRRAXXPPPTPXPXXRXP 841
P PP P P PP P A PPP P P P
Sbjct: 448 PLPPSAPIAPPLPAGMPAAPPLPP--AAPAPPPAPAPAPAAP 487
Score = 27.5 bits (58), Expect = 2.8
Identities = 19/66 (28%), Positives = 22/66 (33%)
Frame = +2
Query: 716 PPPPXXPSXXPXXXXXXRPPPXPXPRRAXXPPPTPXPXXRXPXPXFLXXXXXXXXXXXPX 895
PPPP PS +PP + PPP P P R + P
Sbjct: 311 PPPPPPPSRR----NRGKPPIGNGSSNSSLPPPPPPP--RSNAAGSIPLPPQGRSAPPPP 364
Query: 896 PPXXAP 913
PP AP
Sbjct: 365 PPRSAP 370
Score = 27.1 bits (57), Expect = 3.7
Identities = 14/34 (41%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Frame = +2
Query: 716 PPPPXXPSXXPXXXXXXRPPPXPXP-RRAXXPPP 814
PPP S RPPP P P RR PP
Sbjct: 293 PPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPP 326
Score = 26.2 bits (55), Expect = 6.5
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +2
Query: 719 PPPXXPSXXPXXXXXXRPPPXPXPRRAXXPPPTPXP 826
PPP P P R PP RA PP P P
Sbjct: 361 PPPPPPRSAPSTG---RQPPPLSSSRAVSNPPAPPP 393
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.9 bits (64), Expect = 0.53
Identities = 18/66 (27%), Positives = 20/66 (30%)
Frame = +2
Query: 716 PPPPXXPSXXPXXXXXXRPPPXPXPRRAXXPPPTPXPXXRXPXPXFLXXXXXXXXXXXPX 895
PP P + P PP P P + PP P P P P
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKP--SVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKA 1236
Query: 896 PPXXAP 913
PP AP
Sbjct: 1237 PPVPAP 1242
Score = 29.5 bits (63), Expect = 0.70
Identities = 19/69 (27%), Positives = 19/69 (27%), Gaps = 1/69 (1%)
Frame = +2
Query: 716 PPPPXXPSXXPXXXXXXRPPPXPXPRRAXXPPPTPXPXXRXPXPXFLXXXXXXXXXXXPX 895
PP P P PP P P A P P P P P P
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPV 1142
Query: 896 P-PXXAPXP 919
P P A P
Sbjct: 1143 PKPSVAAPP 1151
Score = 28.3 bits (60), Expect = 1.6
Identities = 19/69 (27%), Positives = 19/69 (27%), Gaps = 1/69 (1%)
Frame = +2
Query: 716 PPPPXXPSXXPXXXXXXRPPPXPXPRRAXXPPPTPXPXXRXPXPXFLXXXXXXXXXXXPX 895
PP P P PP P P A P P P P P P
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPV 1161
Query: 896 P-PXXAPXP 919
P P A P
Sbjct: 1162 PKPSVAAPP 1170
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/43 (32%), Positives = 14/43 (32%), Gaps = 2/43 (4%)
Frame = +2
Query: 719 PPPXXPSXXPXXXXXXRPPPXPXPRRA--XXPPPTPXPXXRXP 841
PP PS P PP P PPP P P P
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIP 1074
Score = 26.2 bits (55), Expect = 6.5
Identities = 18/70 (25%), Positives = 20/70 (28%)
Frame = +2
Query: 710 TTPPPPXXPSXXPXXXXXXRPPPXPXPRRAXXPPPTPXPXXRXPXPXFLXXXXXXXXXXX 889
+TPP P S P PPP P P P P P P +
Sbjct: 1048 STPPVPKSSSGAPSA-----PPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAP 1102
Query: 890 PXPPXXAPXP 919
P P P
Sbjct: 1103 PVPKPSVAVP 1112
Score = 26.2 bits (55), Expect = 6.5
Identities = 17/69 (24%), Positives = 17/69 (24%), Gaps = 1/69 (1%)
Frame = +2
Query: 716 PPPPXXPSXXPXXXXXXRPPPXPXPRRAXXPPPTPXP-XXRXPXPXFLXXXXXXXXXXXP 892
PP P P PP P P P P P P P P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP 1209
Query: 893 XPPXXAPXP 919
PP P
Sbjct: 1210 VPPPSTAPP 1218
Score = 25.8 bits (54), Expect = 8.6
Identities = 15/48 (31%), Positives = 16/48 (33%), Gaps = 2/48 (4%)
Frame = +2
Query: 710 TTPPPPXXPSXXPXXXXXXRPP--PXPXPRRAXXPPPTPXPXXRXPXP 847
T PP P S P P P P P + P P P P P
Sbjct: 1039 TAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVP 1086
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Frame = +1
Query: 670 PXPPXPPX-FXPPXHNPPPPXXPFXXPP 750
P PP PP PP PP P P PP
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPP 1732
Score = 27.1 bits (57), Expect = 3.7
Identities = 17/46 (36%), Positives = 17/46 (36%), Gaps = 4/46 (8%)
Frame = +2
Query: 710 TTPPPPXX----PSXXPXXXXXXRPPPXPXPRRAXXPPPTPXPXXR 835
T PPPP PS P PP P P A P P P R
Sbjct: 1706 TPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP--ASSAPSVPNPGDR 1749
Score = 26.2 bits (55), Expect = 6.5
Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = +2
Query: 713 TPPPPXXPSXXPXXXXXXRPPPXPXPRRAXXP--PPTPXPXXRXP 841
TPPPP P P PPP P A P PP P P P
Sbjct: 1706 TPPPP--PMSVP-------PPPSAPPMPAGPPSAPPPPLPASSAP 1741
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 25.8 bits (54), Expect = 8.6
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +1
Query: 670 PXPPXPPXFXPPXHNPPPP 726
P PP P H+PPPP
Sbjct: 729 PAPPTPAPTPAVKHHPPPP 747
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,136,495
Number of Sequences: 5004
Number of extensions: 37472
Number of successful extensions: 274
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 196
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 466510270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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