BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_J23
(890 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 0.10
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 31 0.84
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 31 1.5
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 31 1.5
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 30 1.9
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 1.9
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 30 1.9
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 2.6
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 30 2.6
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 3.4
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 3.4
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 3.4
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 3.4
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.5
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 4.5
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 5.9
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 5.9
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 29 5.9
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 28 7.8
AL110482-9|CAB60340.3| 372|Caenorhabditis elegans Hypothetical ... 28 7.8
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.7 bits (66), Expect(2) = 0.10
Identities = 22/79 (27%), Positives = 22/79 (27%)
Frame = -2
Query: 853 GGGXXGGGXXXXXXXXRGXFGXXLEXXGGGXSAXRVLXXXXXAGXPAPXXGRGGPGXXXX 674
GGG GGG G G GGG P P G G G
Sbjct: 69 GGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGG 128
Query: 673 XXXXXGGGXXXXXXGXGXG 617
GGG G G G
Sbjct: 129 CGGGCGGGGGGGCGGGGGG 147
Score = 30.3 bits (65), Expect = 1.9
Identities = 25/88 (28%), Positives = 25/88 (28%)
Frame = -3
Query: 888 GXGXFXGGXXXGXXGXXXGGXPXFXXXGGXXLXGDWRXXGGGXAXXGCXXXXGXXXXXXX 709
G G GG G G GG GG G GGG GC
Sbjct: 62 GGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPP-PPPACGG 120
Query: 708 XXXXXGXGXGXXXXXGXXGXXXGXGXGG 625
G G G G G G G GG
Sbjct: 121 GCGGGGGGCGGGCGGGGGGGCGGGGGGG 148
Score = 22.6 bits (46), Expect(2) = 0.10
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -2
Query: 889 GXRGVXGRGXXXGGGXXGGG 830
G G G G GGG GGG
Sbjct: 27 GGGGGCGGGCGGGGGCGGGG 46
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 31.5 bits (68), Expect = 0.84
Identities = 25/94 (26%), Positives = 27/94 (28%)
Frame = -2
Query: 889 GXRGVXGRGXXXGGGXXGGGXXXXXXXXRGXFGXXLEXXGGGXSAXRVLXXXXXAGXPAP 710
G RG GRG G GGG G +G GGG G P
Sbjct: 94 GGRGGGGRGDWGGNNNGGGGNWGGGGNNDGGWGGNNGGGGGGRGG----GGRGGDGRGPP 149
Query: 709 XXGRGGPGXXXXXXXXXGGGXXXXXXGXGXGXMV 608
GG GGG G G G +
Sbjct: 150 GSNGGGDWGGNGGGGRGGGGGRGGGGGGGAGERI 183
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3
Query: 831 PPPXXPPPXXXPRPQTP 881
PPP PPP P PQTP
Sbjct: 357 PPPPPPPPPPPPPPQTP 373
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 30.7 bits (66), Expect = 1.5
Identities = 26/91 (28%), Positives = 28/91 (30%)
Frame = -2
Query: 889 GXRGVXGRGXXXGGGXXGGGXXXXXXXXRGXFGXXLEXXGGGXSAXRVLXXXXXAGXPAP 710
G G G+G GGG GGG G +G GGG G
Sbjct: 89 GFNGGYGQGGYGGGGDFGGGMGG------GGYGGG--GYGGGGDGGGGYGGYGGGGYGGM 140
Query: 709 XXGRGGPGXXXXXXXXXGGGXXXXXXGXGXG 617
G GG G GGG G G G
Sbjct: 141 GGGPGGYGMGGYGGGGGGGGDFGGYGGGGMG 171
Score = 29.5 bits (63), Expect = 3.4
Identities = 24/88 (27%), Positives = 25/88 (28%)
Frame = -2
Query: 880 GVXGRGXXXGGGXXGGGXXXXXXXXRGXFGXXLEXXGGGXSAXRVLXXXXXAGXPAPXXG 701
G G G GGG G G G G + GGG G G
Sbjct: 117 GGYGGGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGGGGGGDFGGYGGGGMGGGGYG 176
Query: 700 RGGPGXXXXXXXXXGGGXXXXXXGXGXG 617
GG G GGG G G G
Sbjct: 177 GGGDG-GYGGGGFGGGGMGGYGGGMGGG 203
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 766 PPPXPPIXXQTXPSXXXKXXXPPXPXPXXPXXXP 867
PPP PP PS PP P P P P
Sbjct: 90 PPPPPPASPCCGPSPVPAPCCPPPPAPAAPCCPP 123
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Frame = +1
Query: 745 TPXXRX--APPPXPPIXXQTXPSXXXKXXXPPXPXPXXPXXXPA 870
TP R PPP PP Q+ PP P P P PA
Sbjct: 600 TPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPA 643
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +1
Query: 748 PXXRXAPPPXPPIXXQTXPSXXXKXXXPPXPXPXXPXXXPA 870
P APPP PP P+ PP P P PA
Sbjct: 624 PISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGPA 664
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Frame = +1
Query: 745 TPXXRX--APPPXPPIXXQTXPSXXXKXXXPPXPXPXXPXXXPA 870
TP R PPP PP Q+ PP P P P PA
Sbjct: 426 TPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPA 469
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +1
Query: 748 PXXRXAPPPXPPIXXQTXPSXXXKXXXPPXPXPXXPXXXPA 870
P APPP PP P+ PP P P PA
Sbjct: 450 PISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGPA 490
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/42 (30%), Positives = 16/42 (38%)
Frame = +3
Query: 765 PPPXXSNXXPNXPLXXXXXXXXPPPXXPPPXXXPRPQTPLXP 890
PPP P P+ PP PRP+TP+ P
Sbjct: 97 PPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPPRPKTPVNP 138
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = +1
Query: 769 PPXPPIXXQTXPSXXXKXXXPPXPXPXXPXXXPAXKXP 882
P PP PS K PP P P P P+ P
Sbjct: 206 PSGPPSPGPVDPSEDPKPSEPPSPGPVDPSDEPSPSDP 243
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 29.5 bits (63), Expect = 3.4
Identities = 23/86 (26%), Positives = 23/86 (26%)
Frame = -2
Query: 880 GVXGRGXXXGGGXXGGGXXXXXXXXRGXFGXXLEXXGGGXSAXRVLXXXXXAGXPAPXXG 701
G G G GG GGG G GG R G G
Sbjct: 51 GGPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGG 110
Query: 700 RGGPGXXXXXXXXXGGGXXXXXXGXG 623
RGG G GGG G G
Sbjct: 111 RGGGGGGGGGRGGGGGGRGGGGRGRG 136
Score = 28.7 bits (61), Expect = 5.9
Identities = 24/88 (27%), Positives = 25/88 (28%)
Frame = -2
Query: 880 GVXGRGXXXGGGXXGGGXXXXXXXXRGXFGXXLEXXGGGXSAXRVLXXXXXAGXPAPXXG 701
G G G GGG G G G GGG + G G
Sbjct: 49 GGGGPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNG-----GGGRGGGGGGGGG 103
Query: 700 RGGPGXXXXXXXXXGGGXXXXXXGXGXG 617
RGG G GGG G G G
Sbjct: 104 RGGGGGGRGGGGGGGGGRGGGGGGRGGG 131
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +2
Query: 764 PPPXXLQSPXKXXPPXXXXXGXPPXXXPXXPXXXPPXNXPXP 889
PPP L PP G PP P PP P P
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Score = 29.1 bits (62), Expect = 4.5
Identities = 21/86 (24%), Positives = 21/86 (24%)
Frame = +2
Query: 626 PPXPXPXXXPXXPXXXXXPXPXXXXXXXXXXXXXXPXXXQHPXXAXPPPXXLQSPXKXXP 805
PP P P P P P P P PPP K P
Sbjct: 727 PPPPPPGGLP--PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGP 784
Query: 806 PXXXXXGXPPXXXPXXPXXXPPXNXP 883
P G P P PP P
Sbjct: 785 PPPPPPGMFAPMAPVIPDYLPPKKVP 810
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +3
Query: 765 PPPXXSNXXPNXPLXXXXXXXXPPPXXPPPXXXPRPQTPLXP 890
PP P P PPP PPP P P P P
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +2
Query: 764 PPPXXLQSPXKXXPPXXXXXGXPPXXXPXXPXXXPPXNXPXP 889
PPP L PP G PP P PP P P
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Score = 29.1 bits (62), Expect = 4.5
Identities = 21/86 (24%), Positives = 21/86 (24%)
Frame = +2
Query: 626 PPXPXPXXXPXXPXXXXXPXPXXXXXXXXXXXXXXPXXXQHPXXAXPPPXXLQSPXKXXP 805
PP P P P P P P P PPP K P
Sbjct: 727 PPPPPPGGLP--PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGP 784
Query: 806 PXXXXXGXPPXXXPXXPXXXPPXNXP 883
P G P P PP P
Sbjct: 785 PPPPPPGMFAPMAPVIPDYLPPKKVP 810
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +3
Query: 765 PPPXXSNXXPNXPLXXXXXXXXPPPXXPPPXXXPRPQTPLXP 890
PP P P PPP PPP P P P P
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +2
Query: 764 PPPXXLQSPXKXXPPXXXXXGXPPXXXPXXPXXXPPXNXPXP 889
PPP L PP G PP P PP P P
Sbjct: 313 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 354
Score = 29.1 bits (62), Expect = 4.5
Identities = 21/86 (24%), Positives = 21/86 (24%)
Frame = +2
Query: 626 PPXPXPXXXPXXPXXXXXPXPXXXXXXXXXXXXXXPXXXQHPXXAXPPPXXLQSPXKXXP 805
PP P P P P P P P PPP K P
Sbjct: 310 PPPPPPGGLP--PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGP 367
Query: 806 PXXXXXGXPPXXXPXXPXXXPPXNXP 883
P G P P PP P
Sbjct: 368 PPPPPPGMFAPMAPVIPDYLPPKKVP 393
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +3
Query: 765 PPPXXSNXXPNXPLXXXXXXXXPPPXXPPPXXXPRPQTPLXP 890
PP P P PPP PPP P P P P
Sbjct: 319 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 360
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 29.1 bits (62), Expect = 4.5
Identities = 25/93 (26%), Positives = 27/93 (29%), Gaps = 2/93 (2%)
Frame = -2
Query: 889 GXRGVXGRGXXXGGGXXGGGXXXXXXXXRGXFGXXLEXXGGGXSAXRV-LXXXXXAGXPA 713
G G G G GGG GGG G G GG ++ V L G P
Sbjct: 101 GCGGGGGCGGGGGGGCGGGGGGGCGGGGGGGGGGYASGGSGGFASAPVSLPAPSYGGPPP 160
Query: 712 PXXG-RGGPGXXXXXXXXXGGGXXXXXXGXGXG 617
P P GGG G G
Sbjct: 161 PAPSFSHAPSGGYSSGGSSGGGYSSGGSSGGGG 193
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 4.5
Identities = 25/89 (28%), Positives = 25/89 (28%)
Frame = -2
Query: 889 GXRGVXGRGXXXGGGXXGGGXXXXXXXXRGXFGXXLEXXGGGXSAXRVLXXXXXAGXPAP 710
G G G G GGG GGG G G GGG S G
Sbjct: 101 GGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGG 160
Query: 709 XXGRGGPGXXXXXXXXXGGGXXXXXXGXG 623
GG G GGG G G
Sbjct: 161 GGCGGGGGGGCGGGSSGGGGYAVAPSGGG 189
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 4.5
Identities = 25/89 (28%), Positives = 25/89 (28%)
Frame = -2
Query: 889 GXRGVXGRGXXXGGGXXGGGXXXXXXXXRGXFGXXLEXXGGGXSAXRVLXXXXXAGXPAP 710
G G G G GGG GGG G G GGG S G
Sbjct: 101 GGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGG 160
Query: 709 XXGRGGPGXXXXXXXXXGGGXXXXXXGXG 623
GG G GGG G G
Sbjct: 161 GGCGGGGGGGCGGGSSGGGGYAVAPSGGG 189
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = +3
Query: 744 NTLXALXPPPXXSNXXPNXPLXXXXXXXXPPPXXPPPXXXPRPQTP 881
N + A PPP P PL PPP PPP P P
Sbjct: 61 NIVKATPPPPP-----PPPPLISILQQAPPPPPPPPPPTLKAPPPP 101
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +3
Query: 765 PPPXXSNXXPNXPLXXXXXXXXPPPXXPPPXXXPRPQTPLXP 890
PPP P PL PP PPP P P P P
Sbjct: 31 PPPPPPMCAP-PPLPCPPPPICPPQFCPPPPMCPPPPPPPPP 71
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 763 APPPXPPIXXQTXPSXXXKXXXPPXPXP 846
+PPP PP+ PS PP P P
Sbjct: 495 SPPPPPPLPPIATPSSVPPPPPPPPPPP 522
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 765 PPPXXSNXXPNXPLXXXXXXXXPPPXXPPPXXXPRPQT 878
PPP P P P P PPP PRP T
Sbjct: 548 PPPPPREPTPREPTPEPEPVREPTP-PPPPPAKPRPLT 584
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.3 bits (60), Expect = 7.8
Identities = 20/89 (22%), Positives = 23/89 (25%), Gaps = 2/89 (2%)
Frame = +2
Query: 629 PXPXPXXXPXXPXXXXXPXPXXXXXXXXXXXXXXPXXXQHPXXAXPPPXXLQS--PXKXX 802
P P P P P P P +P A P P + P
Sbjct: 63 PAPAPPPAPYPQHAVPAPAPPLASYPQNAVPVPAPPPAPYPQHAVPAPAPPPAPYPQHAV 122
Query: 803 PPXXXXXGXPPXXXPXXPXXXPPXNXPXP 889
P PP P PP + P P
Sbjct: 123 PAPAPYQQQPPPPPPPPHYPPPPPHYPPP 151
>AL110482-9|CAB60340.3| 372|Caenorhabditis elegans Hypothetical
protein Y39G8B.4 protein.
Length = 372
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = +2
Query: 416 FTMSHYVMWFLDYISNI*HTTVIAFLRVNRVHILLYT 526
FTM +++F +Y+S + ++IA + V ++LY+
Sbjct: 184 FTMIFSIVFFFNYLSYVFGISIIAISNIGAVMLMLYS 220
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,728,671
Number of Sequences: 27780
Number of extensions: 326075
Number of successful extensions: 1786
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1459
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -