Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_J22
(944 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 34 0.19
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 34 0.19
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 33 0.25
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 33 0.25
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 33 0.25
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 33 0.25
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 33 0.25
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 33 0.25
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 33 0.25
12_02_1282 + 27528159-27529148,27529549-27529614 32 0.58
09_02_0603 - 11150739-11150746,11150791-11151340 29 5.4
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 33.9 bits (74), Expect = 0.19
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +1
Query: 118 MXXEEVAXLXVDNGXGMCKVGFVXDDAXR 204
M E++ + DNG GM K GF DDA R
Sbjct: 1 MADEDIQPIVCDNGTGMVKAGFAGDDAPR 29
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 33.9 bits (74), Expect = 0.19
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +1
Query: 118 MXXEEVAXLXVDNGXGMCKVGFVXDDAXR 204
M E++ + DNG GM K GF DDA R
Sbjct: 1 MAEEDIQPIVCDNGTGMVKAGFAGDDAPR 29
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 33.5 bits (73), Expect = 0.25
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1
Query: 127 EEVAXLXVDNGXGMCKVGFVXDDAXR 204
E++ L DNG GM K GF DDA R
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPR 30
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 33.5 bits (73), Expect = 0.25
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1
Query: 127 EEVAXLXVDNGXGMCKVGFVXDDAXR 204
E++ L DNG GM K GF DDA R
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPR 30
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 33.5 bits (73), Expect = 0.25
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1
Query: 127 EEVAXLXVDNGXGMCKVGFVXDDAXR 204
E++ L DNG GM K GF DDA R
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPR 30
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 33.5 bits (73), Expect = 0.25
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1
Query: 127 EEVAXLXVDNGXGMCKVGFVXDDAXR 204
E++ L DNG GM K GF DDA R
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPR 30
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 33.5 bits (73), Expect = 0.25
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1
Query: 127 EEVAXLXVDNGXGMCKVGFVXDDAXR 204
E++ L DNG GM K GF DDA R
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPR 30
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 33.5 bits (73), Expect = 0.25
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1
Query: 127 EEVAXLXVDNGXGMCKVGFVXDDAXR 204
E++ L DNG GM K GF DDA R
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPR 30
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 33.5 bits (73), Expect = 0.25
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1
Query: 127 EEVAXLXVDNGXGMCKVGFVXDDAXR 204
E++ L DNG GM K GF DDA R
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPR 30
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 32.3 bits (70), Expect = 0.58
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 127 EEVAXLXVDNGXGMCKVGFVXDDAXR 204
+++ L DNG GM K GF DDA R
Sbjct: 5 DDIQPLVCDNGTGMVKAGFAGDDAPR 30
>09_02_0603 - 11150739-11150746,11150791-11151340
Length = 185
Score = 29.1 bits (62), Expect = 5.4
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 671 PPXHKTXPPPXSXXFXPLXXXQTPXPPP 754
PP PPP F PL P PPP
Sbjct: 39 PPFGFPPPPPPGSTFVPLPQSGVPPPPP 66
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,748,790
Number of Sequences: 37544
Number of extensions: 107013
Number of successful extensions: 377
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 368
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2717819680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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