BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_J21
(887 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB002350-1|BAA20809.2| 721|Homo sapiens KIAA0352 protein. 33 1.0
U61375-1|AAC50690.1| 226|Homo sapiens ETV6 protein. 30 9.8
U11732-1|AAA19786.1| 452|Homo sapiens tel protein. 30 9.8
DQ841178-1|ABI30005.1| 556|Homo sapiens B-cell lineage specific... 30 9.8
BC043399-1|AAH43399.1| 452|Homo sapiens ets variant gene 6 (TEL... 30 9.8
AF041811-1|AAC12728.2| 408|Homo sapiens ETS related protein-gro... 30 9.8
>AB002350-1|BAA20809.2| 721|Homo sapiens KIAA0352 protein.
Length = 721
Score = 33.5 bits (73), Expect = 1.0
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = -3
Query: 345 YTSPXNXLTTXTFMYXSQLFSMLYSLGDLLDVLKHGRLEDMVKQLHDA-KLLHLHVQGLP 169
+ +P N +F+Y S+LF+ L ++G + +V + +ED+++ H L + P
Sbjct: 83 FITPANFEKVLSFVYTSELFTDLINVGVIYEVAERLGMEDLLQACHSTFPDLESTARAKP 142
Query: 168 FGSLGEDH 145
S E H
Sbjct: 143 LTSTSESH 150
>U61375-1|AAC50690.1| 226|Homo sapiens ETV6 protein.
Length = 226
Score = 30.3 bits (65), Expect = 9.8
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 135 LRDDGLHQGNQMVNLGH-EDEGALHHEAA*PYPPADH 242
L +DGLH+ + +NL H ED ++H PP +H
Sbjct: 182 LSEDGLHREGKPINLSHREDLAYMNHIMVSVSPPEEH 218
>U11732-1|AAA19786.1| 452|Homo sapiens tel protein.
Length = 452
Score = 30.3 bits (65), Expect = 9.8
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 135 LRDDGLHQGNQMVNLGH-EDEGALHHEAA*PYPPADH 242
L +DGLH+ + +NL H ED ++H PP +H
Sbjct: 292 LSEDGLHREGKPINLSHREDLAYMNHIMVSVSPPEEH 328
>DQ841178-1|ABI30005.1| 556|Homo sapiens B-cell lineage specific
activator/TEL oncogene fusion protein protein.
Length = 556
Score = 30.3 bits (65), Expect = 9.8
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 135 LRDDGLHQGNQMVNLGH-EDEGALHHEAA*PYPPADH 242
L +DGLH+ + +NL H ED ++H PP +H
Sbjct: 396 LSEDGLHREGKPINLSHREDLAYMNHIMVSVSPPEEH 432
>BC043399-1|AAH43399.1| 452|Homo sapiens ets variant gene 6 (TEL
oncogene) protein.
Length = 452
Score = 30.3 bits (65), Expect = 9.8
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 135 LRDDGLHQGNQMVNLGH-EDEGALHHEAA*PYPPADH 242
L +DGLH+ + +NL H ED ++H PP +H
Sbjct: 292 LSEDGLHREGKPINLSHREDLAYMNHIMVSVSPPEEH 328
>AF041811-1|AAC12728.2| 408|Homo sapiens ETS related protein-growth
factor receptor tyrosine kinase fusion proteins protein.
Length = 408
Score = 30.3 bits (65), Expect = 9.8
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 135 LRDDGLHQGNQMVNLGH-EDEGALHHEAA*PYPPADH 242
L +DGLH+ + +NL H ED ++H PP +H
Sbjct: 67 LSEDGLHREGKPINLSHREDLAYMNHIMVSVSPPEEH 103
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,779,661
Number of Sequences: 237096
Number of extensions: 1971408
Number of successful extensions: 3637
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3637
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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