Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_J21
         (887 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66495-1|CAA91268.2|  502|Caenorhabditis elegans Hypothetical pr...    29   3.4  

>Z66495-1|CAA91268.2|  502|Caenorhabditis elegans Hypothetical
           protein C36A4.1 protein.
          Length = 502

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 18/78 (23%), Positives = 29/78 (37%)
 Frame = +3

Query: 366 GETFVHTNELQMXEAVKVFRVLYYAXDFDVFMRTACWMXXRIXGGLFVYXFTAACLPQKP 545
           G T+   + ++  + V    + +Y   F  F+R  C     I G  +       CLP   
Sbjct: 349 GLTYDSIHNMKYLDCVYKETLRFYPPHFS-FIRRLCREDITIRGQFYPKGAIVVCLPHTV 407

Query: 546 TARVSTWPAPYEIYPYFF 599
                 W +P E +P  F
Sbjct: 408 HRNPENWDSPEEFHPERF 425


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,051,366
Number of Sequences: 27780
Number of extensions: 281633
Number of successful extensions: 592
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 592
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)