Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_J20
(862 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L11567-1|AAA62148.1| 97|Homo sapiens ribosomal protein L37 pro... 132 2e-30
D23661-1|BAA04888.1| 97|Homo sapiens ribosomal protein L37 pro... 132 2e-30
CR456890-1|CAG33171.1| 97|Homo sapiens RPL37 protein. 132 2e-30
BC084576-1|AAH84576.1| 97|Homo sapiens RPL37 protein protein. 132 2e-30
BC079477-1|AAH79477.1| 97|Homo sapiens ribosomal protein L37 p... 132 2e-30
AB061834-1|BAB79472.1| 97|Homo sapiens ribosomal protein L37 p... 132 2e-30
S79979-1|AAB47039.2| 97|Homo sapiens ribosomal protein L37 pro... 130 8e-30
D89501-1|BAA13971.1| 134|Homo sapiens PBI protein. 31 4.1
>L11567-1|AAA62148.1| 97|Homo sapiens ribosomal protein L37
protein.
Length = 97
Score = 132 bits (319), Expect = 2e-30
Identities = 60/94 (63%), Positives = 69/94 (73%), Gaps = 1/94 (1%)
Frame = +3
Query: 78 MTKGXSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 257
MTKG SSFGKRRNKTHTLCRRCG +YH+QKS C +CGYPA + R Y+WS KA
Sbjct: 1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60
Query: 258 XXXMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 356
MRHLKIV RRFR+GF+EG P P + AVA+S
Sbjct: 61 TGRMRHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94
>D23661-1|BAA04888.1| 97|Homo sapiens ribosomal protein L37
protein.
Length = 97
Score = 132 bits (319), Expect = 2e-30
Identities = 60/94 (63%), Positives = 69/94 (73%), Gaps = 1/94 (1%)
Frame = +3
Query: 78 MTKGXSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 257
MTKG SSFGKRRNKTHTLCRRCG +YH+QKS C +CGYPA + R Y+WS KA
Sbjct: 1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60
Query: 258 XXXMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 356
MRHLKIV RRFR+GF+EG P P + AVA+S
Sbjct: 61 TGRMRHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94
>CR456890-1|CAG33171.1| 97|Homo sapiens RPL37 protein.
Length = 97
Score = 132 bits (319), Expect = 2e-30
Identities = 60/94 (63%), Positives = 69/94 (73%), Gaps = 1/94 (1%)
Frame = +3
Query: 78 MTKGXSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 257
MTKG SSFGKRRNKTHTLCRRCG +YH+QKS C +CGYPA + R Y+WS KA
Sbjct: 1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60
Query: 258 XXXMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 356
MRHLKIV RRFR+GF+EG P P + AVA+S
Sbjct: 61 TGRMRHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94
>BC084576-1|AAH84576.1| 97|Homo sapiens RPL37 protein protein.
Length = 97
Score = 132 bits (319), Expect = 2e-30
Identities = 60/94 (63%), Positives = 69/94 (73%), Gaps = 1/94 (1%)
Frame = +3
Query: 78 MTKGXSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 257
MTKG SSFGKRRNKTHTLCRRCG +YH+QKS C +CGYPA + R Y+WS KA
Sbjct: 1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60
Query: 258 XXXMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 356
MRHLKIV RRFR+GF+EG P P + AVA+S
Sbjct: 61 TGRMRHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94
>BC079477-1|AAH79477.1| 97|Homo sapiens ribosomal protein L37
protein.
Length = 97
Score = 132 bits (319), Expect = 2e-30
Identities = 60/94 (63%), Positives = 69/94 (73%), Gaps = 1/94 (1%)
Frame = +3
Query: 78 MTKGXSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 257
MTKG SSFGKRRNKTHTLCRRCG +YH+QKS C +CGYPA + R Y+WS KA
Sbjct: 1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60
Query: 258 XXXMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 356
MRHLKIV RRFR+GF+EG P P + AVA+S
Sbjct: 61 TGRMRHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94
>AB061834-1|BAB79472.1| 97|Homo sapiens ribosomal protein L37
protein.
Length = 97
Score = 132 bits (319), Expect = 2e-30
Identities = 60/94 (63%), Positives = 69/94 (73%), Gaps = 1/94 (1%)
Frame = +3
Query: 78 MTKGXSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 257
MTKG SSFGKRRNKTHTLCRRCG +YH+QKS C +CGYPA + R Y+WS KA
Sbjct: 1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60
Query: 258 XXXMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 356
MRHLKIV RRFR+GF+EG P P + AVA+S
Sbjct: 61 TGRMRHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94
>S79979-1|AAB47039.2| 97|Homo sapiens ribosomal protein L37
protein.
Length = 97
Score = 130 bits (313), Expect = 8e-30
Identities = 59/94 (62%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Frame = +3
Query: 78 MTKGXSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 257
MTKG SSFGKRRNKTHTLCRRCG +YH+QKS C +CGYPA + R Y+WS KA
Sbjct: 1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60
Query: 258 XXXMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 356
M HLKIV RRFR+GF+EG P P + AVA+S
Sbjct: 61 TGRMSHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94
>D89501-1|BAA13971.1| 134|Homo sapiens PBI protein.
Length = 134
Score = 31.5 bits (68), Expect = 4.1
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +1
Query: 718 RFLPSPDSLXPGPFRLRXXGISPPPKAGNTGYPTQSRGYPPG 843
R PSP GP R++ + PP G P+Q R YPPG
Sbjct: 75 RIPPSPPPPY-GPGRIQSHSLPPPYGPGYPQPPSQPRPYPPG 115
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,552,528
Number of Sequences: 237096
Number of extensions: 2142536
Number of successful extensions: 3990
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3990
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10984231046
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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