Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_J20
(862 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83128-1|CAB05635.1| 92|Caenorhabditis elegans Hypothetical pr... 111 8e-25
Z77131-1|CAB00854.1| 91|Caenorhabditis elegans Hypothetical pr... 104 7e-23
AF098986-5|AAC67426.1| 671|Caenorhabditis elegans Hypothetical ... 31 1.1
U41275-2|AAA82465.1| 438|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z68113-3|CAA92150.1| 333|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z92777-6|CAE17682.1| 353|Caenorhabditis elegans Hypothetical pr... 28 7.4
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 7.4
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 7.4
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 7.4
>Z83128-1|CAB05635.1| 92|Caenorhabditis elegans Hypothetical
protein W01D2.1 protein.
Length = 92
Score = 111 bits (266), Expect = 8e-25
Identities = 46/87 (52%), Positives = 59/87 (67%)
Frame = +3
Query: 78 MTKGXSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 257
MTKG +FGK+ K+HTLC+RCG+SS+HIQK +CA CGYP AK R+Y+W K+
Sbjct: 1 MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYPDAKKRTYNWGAKSIRRRTTG 60
Query: 258 XXXMRHLKIVRRRFRNGFKEGKPTPPK 338
RHL+ V RFRNGF+EG P+
Sbjct: 61 TGRTRHLRDVNARFRNGFREGTTPKPR 87
>Z77131-1|CAB00854.1| 91|Caenorhabditis elegans Hypothetical
protein C54C6.1 protein.
Length = 91
Score = 104 bits (250), Expect = 7e-23
Identities = 44/85 (51%), Positives = 56/85 (65%)
Frame = +3
Query: 78 MTKGXSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 257
MTKG +FGK+ K+HTLC+RCG+SS+HIQK +CA CGY AK R+Y+W K+
Sbjct: 1 MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYQDAKKRTYNWGAKSIRRRTTG 60
Query: 258 XXXMRHLKIVRRRFRNGFKEGKPTP 332
RHL+ V RFRNGF+ P P
Sbjct: 61 TGRTRHLRDVNARFRNGFRGTTPKP 85
>AF098986-5|AAC67426.1| 671|Caenorhabditis elegans Hypothetical
protein C36C9.4 protein.
Length = 671
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 96 SFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAA 203
++ K TH C +CG+ + + KC CG P A
Sbjct: 93 TYNKNNFSTHHFCNKCGKVAQN--SKKCKHCGGPVA 126
>U41275-2|AAA82465.1| 438|Caenorhabditis elegans Hypothetical
protein T25D1.2 protein.
Length = 438
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 96 SFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAA 203
++ K TH C +CG+ + + KC CG P A
Sbjct: 165 TYNKNNFSTHHFCNKCGKVAQN--SKKCKYCGGPVA 198
>Z68113-3|CAA92150.1| 333|Caenorhabditis elegans Hypothetical
protein E03G2.4 protein.
Length = 333
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Frame = +1
Query: 787 PPKAGNTGYPTQ--SRGYPPGNQHCXP 861
P K G GYP S G+P G HC P
Sbjct: 300 PGKPGQKGYPGPDGSAGFPGGCDHCPP 326
>Z92777-6|CAE17682.1| 353|Caenorhabditis elegans Hypothetical
protein C17H1.9 protein.
Length = 353
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = +1
Query: 109 AEIRPIRYAEDVVDRH---ITFKNQNAPNVDILQQNYDP 216
A+++ I+Y D +++H + F+NQ + L+ N DP
Sbjct: 230 ADLKKIKYTSDEIEKHKSKLEFRNQQLESSRTLEINADP 268
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +1
Query: 727 PSPDSLXPGPFRLRXXGISPPPKAGNTGYPTQSRGYPP 840
P P P P G PPP+AG+ P RG PP
Sbjct: 274 PPPTGSPPPP---PAGGSPPPPRAGSPPPPPPPRGSPP 308
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +1
Query: 727 PSPDSLXPGPFRLRXXGISPPPKAGNTGYPTQSRGYPP 840
P P P P G PPP+AG+ P RG PP
Sbjct: 295 PPPTGSPPPP---PAGGSPPPPRAGSPPPPPPPRGSPP 329
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +1
Query: 727 PSPDSLXPGPFRLRXXGISPPPKAGNTGYPTQSRGYPP 840
P P P P G PPP+AG+ P RG PP
Sbjct: 280 PPPTGSPPPP---PAGGSPPPPRAGSPPPPPPPRGSPP 314
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,287,170
Number of Sequences: 27780
Number of extensions: 315509
Number of successful extensions: 617
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 614
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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