Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_J19
(850 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.19
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.19
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.19
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.0
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 1.8
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 1.8
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 1.8
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 4.2
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 4.2
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 5.5
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 29 5.5
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 28 7.3
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.5 bits (73), Expect = 0.19
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = +1
Query: 616 PGPGXPLXXGXXXPPXXXNXXXXXXAPPPPXKXXXXXXPPXXXXXXXXPPPXXXPPP 786
P PG P G PP PPP P PPP PPP
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Score = 32.7 bits (71), Expect = 0.34
Identities = 19/64 (29%), Positives = 19/64 (29%)
Frame = +3
Query: 630 PPXXGGXXPPPXXXXXXXXXXPPPPXXXXXXXXXPXXXXKXXXPPPXXXXPPXXXXPXXX 809
PP GG PPP PPPP P PPP PP P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPP-----PGGLPPITGGPPPPPPPGGLPPISGGPPPP 761
Query: 810 XXXP 821
P
Sbjct: 762 PPPP 765
Score = 32.7 bits (71), Expect = 0.34
Identities = 18/59 (30%), Positives = 18/59 (30%)
Frame = +3
Query: 624 GXPPXXGGXXPPPXXXXXXXXXXPPPPXXXXXXXXXPXXXXKXXXPPPXXXXPPXXXXP 800
G PP GG PPP PPP P PPP PP P
Sbjct: 718 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP-PISGGPPPPPPPPGGCPPPPPPP 775
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 624 GXPPXXGGXXPPPXXXXXXXXXXPPPP 704
G PP GG PPP PPPP
Sbjct: 750 GLPPISGGPPPPPPPPGGCPPPPPPPP 776
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.5 bits (73), Expect = 0.19
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = +1
Query: 616 PGPGXPLXXGXXXPPXXXNXXXXXXAPPPPXKXXXXXXPPXXXXXXXXPPPXXXPPP 786
P PG P G PP PPP P PPP PPP
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Score = 32.7 bits (71), Expect = 0.34
Identities = 19/64 (29%), Positives = 19/64 (29%)
Frame = +3
Query: 630 PPXXGGXXPPPXXXXXXXXXXPPPPXXXXXXXXXPXXXXKXXXPPPXXXXPPXXXXPXXX 809
PP GG PPP PPPP P PPP PP P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPP-----PGGLPPITGGPPPPPPPGGLPPISGGPPPP 761
Query: 810 XXXP 821
P
Sbjct: 762 PPPP 765
Score = 32.7 bits (71), Expect = 0.34
Identities = 18/59 (30%), Positives = 18/59 (30%)
Frame = +3
Query: 624 GXPPXXGGXXPPPXXXXXXXXXXPPPPXXXXXXXXXPXXXXKXXXPPPXXXXPPXXXXP 800
G PP GG PPP PPP P PPP PP P
Sbjct: 718 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP-PISGGPPPPPPPPGGCPPPPPPP 775
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 624 GXPPXXGGXXPPPXXXXXXXXXXPPPP 704
G PP GG PPP PPPP
Sbjct: 750 GLPPISGGPPPPPPPPGGCPPPPPPPP 776
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.5 bits (73), Expect = 0.19
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = +1
Query: 616 PGPGXPLXXGXXXPPXXXNXXXXXXAPPPPXKXXXXXXPPXXXXXXXXPPPXXXPPP 786
P PG P G PP PPP P PPP PPP
Sbjct: 298 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 354
Score = 32.7 bits (71), Expect = 0.34
Identities = 19/64 (29%), Positives = 19/64 (29%)
Frame = +3
Query: 630 PPXXGGXXPPPXXXXXXXXXXPPPPXXXXXXXXXPXXXXKXXXPPPXXXXPPXXXXPXXX 809
PP GG PPP PPPP P PPP PP P
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPP-----PGGLPPITGGPPPPPPPGGLPPISGGPPPP 344
Query: 810 XXXP 821
P
Sbjct: 345 PPPP 348
Score = 32.7 bits (71), Expect = 0.34
Identities = 18/59 (30%), Positives = 18/59 (30%)
Frame = +3
Query: 624 GXPPXXGGXXPPPXXXXXXXXXXPPPPXXXXXXXXXPXXXXKXXXPPPXXXXPPXXXXP 800
G PP GG PPP PPP P PPP PP P
Sbjct: 301 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP-PISGGPPPPPPPPGGCPPPPPPP 358
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 624 GXPPXXGGXXPPPXXXXXXXXXXPPPP 704
G PP GG PPP PPPP
Sbjct: 333 GLPPISGGPPPPPPPPGGCPPPPPPPP 359
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/64 (28%), Positives = 18/64 (28%)
Frame = +3
Query: 630 PPXXGGXXPPPXXXXXXXXXXPPPPXXXXXXXXXPXXXXKXXXPPPXXXXPPXXXXPXXX 809
PP G PPP PPPP P PPP PP P
Sbjct: 67 PPVPNGFIPPPPGPGGIP---PPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGL 123
Query: 810 XXXP 821
P
Sbjct: 124 GVAP 127
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/54 (27%), Positives = 16/54 (29%)
Frame = +1
Query: 622 PGXPLXXGXXXPPXXXNXXXXXXAPPPPXKXXXXXXPPXXXXXXXXPPPXXXPP 783
P P G PP + PPP PP PPP PP
Sbjct: 255 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 308
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/57 (26%), Positives = 15/57 (26%)
Frame = +3
Query: 630 PPXXGGXXPPPXXXXXXXXXXPPPPXXXXXXXXXPXXXXKXXXPPPXXXXPPXXXXP 800
PP G PPP PP P PPP PP P
Sbjct: 257 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP 313
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/54 (27%), Positives = 16/54 (29%)
Frame = +1
Query: 622 PGXPLXXGXXXPPXXXNXXXXXXAPPPPXKXXXXXXPPXXXXXXXXPPPXXXPP 783
P P G PP + PPP PP PPP PP
Sbjct: 276 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 329
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/57 (26%), Positives = 15/57 (26%)
Frame = +3
Query: 630 PPXXGGXXPPPXXXXXXXXXXPPPPXXXXXXXXXPXXXXKXXXPPPXXXXPPXXXXP 800
PP G PPP PP P PPP PP P
Sbjct: 278 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP 334
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/54 (27%), Positives = 16/54 (29%)
Frame = +1
Query: 622 PGXPLXXGXXXPPXXXNXXXXXXAPPPPXKXXXXXXPPXXXXXXXXPPPXXXPP 783
P P G PP + PPP PP PPP PP
Sbjct: 261 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 314
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/57 (26%), Positives = 15/57 (26%)
Frame = +3
Query: 630 PPXXGGXXPPPXXXXXXXXXXPPPPXXXXXXXXXPXXXXKXXXPPPXXXXPPXXXXP 800
PP G PPP PP P PPP PP P
Sbjct: 263 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP 319
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/59 (28%), Positives = 17/59 (28%), Gaps = 2/59 (3%)
Frame = +1
Query: 616 PGPGXPLXXGXXXPPXXXNXXXXXXAPPPPXKXXXXXXPPXXXXXXXXPP--PXXXPPP 786
P P P PP PPPP PP PP P PPP
Sbjct: 262 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 320
Score = 28.7 bits (61), Expect = 5.5
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 630 PPXXGGXXPPPXXXXXXXXXXPPPP 704
PP GG PPP PPPP
Sbjct: 327 PPGMGGMPPPPPPGMRYPGGMPPPP 351
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/59 (28%), Positives = 17/59 (28%), Gaps = 2/59 (3%)
Frame = +1
Query: 616 PGPGXPLXXGXXXPPXXXNXXXXXXAPPPPXKXXXXXXPPXXXXXXXXPP--PXXXPPP 786
P P P PP PPPP PP PP P PPP
Sbjct: 272 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 330
Score = 28.7 bits (61), Expect = 5.5
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 630 PPXXGGXXPPPXXXXXXXXXXPPPP 704
PP GG PPP PPPP
Sbjct: 337 PPGMGGMPPPPPPGMRYPGGMPPPP 361
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = +3
Query: 624 GXPPXXGGXXPPPXXXXXXXXXXPPPPXXXXXXXXXPXXXXKXXXPPPXXXXPP 785
G PP PPP PPPP P PPP PP
Sbjct: 26 GPPPCP---PPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPP 76
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = +1
Query: 622 PGXPLXXGXXXPPXXXNXXXXXXAPPPPXKXXXXXXPPXXXXXXXXPPPXXXPPP 786
PG PL PP N PPPP PP PP PPP
Sbjct: 32 PG-PLRPWGPPPPWHRNRGPPPFGPPPP---WDRPPPPWRRPPWHRRPPWGLPPP 82
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -3
Query: 785 GGGXXXGGGXXXFXXXXGGXXXXXXXXGGGG 693
GGG GGG F GG GGGG
Sbjct: 54 GGGGGGGGGGGGFGGGNGGFGGGGGGSGGGG 84
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,714,779
Number of Sequences: 27780
Number of extensions: 285979
Number of successful extensions: 1113
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -