Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_J18
         (918 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0385 + 2915532-2916482                                           28   9.0  
02_05_0686 - 30900748-30902167,30903442-30904742                       28   9.0  

>11_01_0385 + 2915532-2916482
          Length = 316

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = +3

Query: 837 PTPAXPXKXGNR-XPAPPLGXXPPXPXP 917
           PTPA P   GN+  P PP    PP P P
Sbjct: 210 PTPAWPHPGGNKWPPLPPFPSHPP-PTP 236


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 13/27 (48%), Positives = 13/27 (48%)
 Frame = +3

Query: 837 PTPAXPXKXGNRXPAPPLGXXPPXPXP 917
           P P  P K G   P PP G  PP P P
Sbjct: 344 PPPPPPAK-GPPPPPPPKGPSPPPPPP 369


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,873,423
Number of Sequences: 37544
Number of extensions: 238637
Number of successful extensions: 843
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 809
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)