Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_J18
         (918 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X94754-1|CAA64381.1|  900|Homo sapiens yeast methionyl-tRNA synt...    40   0.017
D84224-1|BAA95668.1|  900|Homo sapiens methionyl tRNA synthetase...    38   0.039
BT007338-1|AAP36002.1|  900|Homo sapiens methionine-tRNA synthet...    38   0.039
BC015011-1|AAH15011.1|  899|Homo sapiens MARS protein protein.         38   0.039
BC011849-1|AAH11849.1|  900|Homo sapiens methionyl-tRNA syntheta...    38   0.039
BC011639-1|AAH11639.1|  900|Homo sapiens methionyl-tRNA syntheta...    38   0.039
BC006328-1|AAH06328.1|  900|Homo sapiens methionyl-tRNA syntheta...    38   0.039
BC002384-1|AAH02384.1|  900|Homo sapiens methionyl-tRNA syntheta...    38   0.039
AK222767-1|BAD96487.1|  900|Homo sapiens methionine-tRNA synthet...    38   0.039

>X94754-1|CAA64381.1|  900|Homo sapiens yeast methionyl-tRNA
           synthetase homolog protein.
          Length = 900

 Score = 39.5 bits (88), Expect = 0.017
 Identities = 18/50 (36%), Positives = 29/50 (58%)
 Frame = +3

Query: 264 QLPLLEVDPXLXFFSSNAAVQYLFPILDMSENGQCQQLQXWEATRLQPSL 413
           ++P+L+VD     FS++A  +Y F +    ++    Q   WEAT LQP+L
Sbjct: 47  KVPVLQVDSGNYLFSTSAICRYFFLLSGWEQDDLTNQWLEWEATELQPAL 96


>D84224-1|BAA95668.1|  900|Homo sapiens methionyl tRNA synthetase
           protein.
          Length = 900

 Score = 38.3 bits (85), Expect = 0.039
 Identities = 17/50 (34%), Positives = 29/50 (58%)
 Frame = +3

Query: 264 QLPLLEVDPXLXFFSSNAAVQYLFPILDMSENGQCQQLQXWEATRLQPSL 413
           ++P+L++D     FS++A  +Y F +    ++    Q   WEAT LQP+L
Sbjct: 47  KVPVLQLDSGNYLFSTSAICRYFFLLSGWEQDDLTNQWLEWEATELQPAL 96


>BT007338-1|AAP36002.1|  900|Homo sapiens methionine-tRNA synthetase
           protein.
          Length = 900

 Score = 38.3 bits (85), Expect = 0.039
 Identities = 17/50 (34%), Positives = 29/50 (58%)
 Frame = +3

Query: 264 QLPLLEVDPXLXFFSSNAAVQYLFPILDMSENGQCQQLQXWEATRLQPSL 413
           ++P+L++D     FS++A  +Y F +    ++    Q   WEAT LQP+L
Sbjct: 47  KVPVLQLDSGNYLFSTSAICRYFFLLSGWEQDDLTNQWLEWEATELQPAL 96


>BC015011-1|AAH15011.1|  899|Homo sapiens MARS protein protein.
          Length = 899

 Score = 38.3 bits (85), Expect = 0.039
 Identities = 17/50 (34%), Positives = 29/50 (58%)
 Frame = +3

Query: 264 QLPLLEVDPXLXFFSSNAAVQYLFPILDMSENGQCQQLQXWEATRLQPSL 413
           ++P+L++D     FS++A  +Y F +    ++    Q   WEAT LQP+L
Sbjct: 46  KVPVLQLDSGNYLFSTSAICRYFFLLSGWEQDDLTNQWLEWEATELQPAL 95


>BC011849-1|AAH11849.1|  900|Homo sapiens methionyl-tRNA synthetase
           protein.
          Length = 900

 Score = 38.3 bits (85), Expect = 0.039
 Identities = 17/50 (34%), Positives = 29/50 (58%)
 Frame = +3

Query: 264 QLPLLEVDPXLXFFSSNAAVQYLFPILDMSENGQCQQLQXWEATRLQPSL 413
           ++P+L++D     FS++A  +Y F +    ++    Q   WEAT LQP+L
Sbjct: 47  KVPVLQLDSGNYLFSTSAICRYFFLLSGWEQDDLTNQWLEWEATELQPAL 96


>BC011639-1|AAH11639.1|  900|Homo sapiens methionyl-tRNA synthetase
           protein.
          Length = 900

 Score = 38.3 bits (85), Expect = 0.039
 Identities = 17/50 (34%), Positives = 29/50 (58%)
 Frame = +3

Query: 264 QLPLLEVDPXLXFFSSNAAVQYLFPILDMSENGQCQQLQXWEATRLQPSL 413
           ++P+L++D     FS++A  +Y F +    ++    Q   WEAT LQP+L
Sbjct: 47  KVPVLQLDSGNYLFSTSAICRYFFLLSGWEQDDLTNQWLEWEATELQPAL 96


>BC006328-1|AAH06328.1|  900|Homo sapiens methionyl-tRNA synthetase
           protein.
          Length = 900

 Score = 38.3 bits (85), Expect = 0.039
 Identities = 17/50 (34%), Positives = 29/50 (58%)
 Frame = +3

Query: 264 QLPLLEVDPXLXFFSSNAAVQYLFPILDMSENGQCQQLQXWEATRLQPSL 413
           ++P+L++D     FS++A  +Y F +    ++    Q   WEAT LQP+L
Sbjct: 47  KVPVLQLDSGNYLFSTSAICRYFFLLSGWEQDDLTNQWLEWEATELQPAL 96


>BC002384-1|AAH02384.1|  900|Homo sapiens methionyl-tRNA synthetase
           protein.
          Length = 900

 Score = 38.3 bits (85), Expect = 0.039
 Identities = 17/50 (34%), Positives = 29/50 (58%)
 Frame = +3

Query: 264 QLPLLEVDPXLXFFSSNAAVQYLFPILDMSENGQCQQLQXWEATRLQPSL 413
           ++P+L++D     FS++A  +Y F +    ++    Q   WEAT LQP+L
Sbjct: 47  KVPVLQLDSGNYLFSTSAICRYFFLLSGWEQDDLTNQWLEWEATELQPAL 96


>AK222767-1|BAD96487.1|  900|Homo sapiens methionine-tRNA synthetase
           variant protein.
          Length = 900

 Score = 38.3 bits (85), Expect = 0.039
 Identities = 17/50 (34%), Positives = 29/50 (58%)
 Frame = +3

Query: 264 QLPLLEVDPXLXFFSSNAAVQYLFPILDMSENGQCQQLQXWEATRLQPSL 413
           ++P+L++D     FS++A  +Y F +    ++    Q   WEAT LQP+L
Sbjct: 47  KVPVLQLDSGNYLFSTSAICRYFFLLSGWEQDDLTNQWLEWEATELQPAL 96


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,042,034
Number of Sequences: 237096
Number of extensions: 1281275
Number of successful extensions: 7603
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7525
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11936890730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)