Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_J15
(951 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 38 0.002
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 36 0.006
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 32 0.10
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 32 0.14
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.18
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 0.96
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 29 0.96
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 1.7
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 26 9.0
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 37.9 bits (84), Expect = 0.002
Identities = 20/55 (36%), Positives = 20/55 (36%), Gaps = 2/55 (3%)
Frame = +1
Query: 415 PPXXXRAPPXNPXTXPHPPPXX--SXXPXPPPPGXXGGPXXPXNQXPPPPXXAKG 573
PP P P P PPP P PPPP G P PPP A G
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
Score = 37.1 bits (82), Expect = 0.004
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = +1
Query: 430 RAPPXNPXTXPHPPPXXSXXPXPPPPGXXGGPXXPXNQXPPPPXXA 567
++PP P P P + P PPP GGP P PPPP A
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPP----PPPPGVA 771
Score = 30.3 bits (65), Expect = 0.42
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +1
Query: 460 PHPPPXXSXXPXPPPPGXXGGPXXPXNQXPPPPXXAKG 573
P PPP P P P P P PPPP G
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPG 769
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +2
Query: 389 APFPXKXXXPPXXXGPPPXTPXXPPTXPXGXXXXPXPXPRXXXG 520
AP P P G PP P P G P P P G
Sbjct: 745 APAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAG 788
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 36.3 bits (80), Expect = 0.006
Identities = 21/52 (40%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Frame = -2
Query: 557 GGGGXWLXGXXGPPXXPGG----GGXGXXXXXGGGWGXVXGXXGGARXXXGG 414
GG G + G GPP PGG GG G GG G G GG GG
Sbjct: 188 GGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGG 239
Score = 30.7 bits (66), Expect = 0.31
Identities = 19/50 (38%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = -2
Query: 557 GGGGXWLXGXXGPPXXPGGGGXGXXXXXGG--GWGXVXGXXGGARXXXGG 414
GG G + G G PGG G G GG G+G G GG GG
Sbjct: 221 GGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGG 270
Score = 27.1 bits (57), Expect = 3.9
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = -2
Query: 572 PLAXXGGGGXWLXGXXGPPXXPGGGGXGXXXXXGGGW 462
P GG G + G G PGG G G G GW
Sbjct: 237 PGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPGW 273
Score = 26.2 bits (55), Expect = 6.8
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = -2
Query: 503 GGGXGXXXXXGGGWGXVXGXXGGARXXXGGXXXFXERGP 387
GGG G GG+G G GG GG GP
Sbjct: 227 GGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGP 265
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 32.3 bits (70), Expect = 0.10
Identities = 18/53 (33%), Positives = 18/53 (33%), Gaps = 2/53 (3%)
Frame = +1
Query: 415 PPXXXRAPPXNPXTXPHPPPXXSXXPXPP--PPGXXGGPXXPXNQXPPPPXXA 567
P APP P P PP P P P G P P PPP A
Sbjct: 429 PSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPA 481
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/48 (29%), Positives = 16/48 (33%)
Frame = +1
Query: 415 PPXXXRAPPXNPXTXPHPPPXXSXXPXPPPPGXXGGPXXPXNQXPPPP 558
P APP P + P P + P PP P P PP
Sbjct: 421 PSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPP 468
Score = 25.8 bits (54), Expect = 9.0
Identities = 14/42 (33%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Frame = +1
Query: 436 PPXNPXTXP--HPPPXXSXXPXPPPPGXXGGPXXPXNQXPPP 555
PP P + P P + P P PP G P N P P
Sbjct: 233 PPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRP 274
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.9 bits (69), Expect = 0.14
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = +1
Query: 433 APPXNPXTXPHPPPXXSXXPXPPPPGXXGGPXXPXNQXPPP 555
APP P PPP PPPP P P + PPP
Sbjct: 1698 APPQMSAPTPPPPPM----SVPPPPSAPPMPAGPPSAPPPP 1734
Score = 26.6 bits (56), Expect = 5.1
Identities = 15/56 (26%), Positives = 18/56 (32%)
Frame = +1
Query: 391 PLSXKXXXPPXXXRAPPXNPXTXPHPPPXXSXXPXPPPPGXXGGPXXPXNQXPPPP 558
P+ + PP P P PPP P PP P P + P P
Sbjct: 1691 PVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPP--PPLPASSAPSVP 1744
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +1
Query: 415 PPXXXRAPPXNPXTXPHPPPXXSXXPXPPPPG 510
PP P P + P PP S P P PG
Sbjct: 1716 PPPSAPPMPAGPPSAPPPPLPASSAPSVPNPG 1747
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.5 bits (68), Expect = 0.18
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Frame = +1
Query: 436 PPXNPXTXPHPP--PXXSXXPXPPPPG 510
PP NP P PP S P PPPPG
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPG 31
Score = 29.1 bits (62), Expect = 0.96
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 472 PXXSXXPXPPPPGXXGGPXXPXNQXPPPP 558
P + P PPPPG P +Q PPPP
Sbjct: 5 PPGNPPPPPPPPGFE-----PPSQPPPPP 28
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.1 bits (62), Expect = 0.96
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = +1
Query: 418 PXXXRAPPXNPXTXPHPPPXXSXXPXPPPPGXXGGPXXPXNQXPPP 555
P APP P + PP P PPP P P P P
Sbjct: 124 PPSAPAPP-TPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIP 168
Score = 27.1 bits (57), Expect = 3.9
Identities = 16/49 (32%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
Frame = +1
Query: 415 PPXXXRAPPXNPXTXPHPPPXXSXXPXPP--PPGXXGGPXXPXNQXPPP 555
PP +APP P + P P + PP P P P PPP
Sbjct: 158 PPIPSKAPPI-PSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 29.1 bits (62), Expect = 0.96
Identities = 20/51 (39%), Positives = 20/51 (39%), Gaps = 3/51 (5%)
Frame = -2
Query: 557 GGGGXWLXGXXGPPXXPGGGGXGXXXXXGGGWGXVXGXXGG---ARXXXGG 414
GG G G G GG G G GGG G G GG AR GG
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGG 59
Score = 27.5 bits (58), Expect = 2.9
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = -2
Query: 557 GGGGXWLXGXXGPPXXPGGGGXGXXXXXGGGWGXVXGXXGGARXXXGG 414
GG G G GGG G GG G G GG+ GG
Sbjct: 19 GGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
Score = 27.1 bits (57), Expect = 3.9
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = -2
Query: 557 GGGGXWLXGXXGPPXXPGGGGXGXXXXXGGGWGXVXGXXGGARXXXGGXXXFXE 396
GG G + G G GG G GG G G GG GG E
Sbjct: 23 GGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGGAKVIIE 76
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/46 (30%), Positives = 16/46 (34%)
Frame = +1
Query: 436 PPXNPXTXPHPPPXXSXXPXPPPPGXXGGPXXPXNQXPPPPXXAKG 573
P P P P S P P P P P + PP P + G
Sbjct: 1180 PVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAG 1225
Score = 27.9 bits (59), Expect = 2.2
Identities = 18/54 (33%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Frame = +1
Query: 418 PXXXRAPPXNPXTXPHPP-PXXSXXPXPPPPGXXGGP-XXPXNQXPPPPXXAKG 573
P APP + PP P S P P P P P + PP P A G
Sbjct: 1134 PVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAG 1187
Score = 27.9 bits (59), Expect = 2.2
Identities = 16/54 (29%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Frame = +1
Query: 418 PXXXRAPPXNPXTXPHPPPXXSXXPXPPPPGXXGG--PXXPXNQXPPPPXXAKG 573
P APP + PP PP P G P P ++ PP P + G
Sbjct: 1153 PAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVG 1206
Score = 27.5 bits (58), Expect = 2.9
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +1
Query: 415 PPXXXRAPPXNPXTXPHPPPXXSXXPXPPPPGXXGGPXXPXNQXPPPPXXA 567
P APP P PP PP P G P P PP A
Sbjct: 1124 PKPSVAAPPV-PVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPA 1173
Score = 26.2 bits (55), Expect = 6.8
Identities = 13/47 (27%), Positives = 14/47 (29%)
Frame = +1
Query: 418 PXXXRAPPXNPXTXPHPPPXXSXXPXPPPPGXXGGPXXPXNQXPPPP 558
P PP + PP PP P G P P PP
Sbjct: 1086 PAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPP 1132
Score = 26.2 bits (55), Expect = 6.8
Identities = 15/48 (31%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Frame = +1
Query: 418 PXXXRAPPXNPXTXPHPP-PXXSXXPXPPPPGXXGGPXXPXNQXPPPP 558
P APP + PP P S P P P P + PP P
Sbjct: 1115 PAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVP 1162
Score = 25.8 bits (54), Expect = 9.0
Identities = 18/62 (29%), Positives = 19/62 (30%), Gaps = 2/62 (3%)
Frame = +1
Query: 391 PLSXKXXXPPXXXRAPPXNPXT--XPHPPPXXSXXPXPPPPGXXGGPXXPXNQXPPPPXX 564
P S P PP P + P P P P PPP P P P
Sbjct: 1174 PSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPT 1233
Query: 565 AK 570
AK
Sbjct: 1234 AK 1235
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.8 bits (54), Expect = 9.0
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +2
Query: 416 PPXXXGPPPXTPXXPPTXPXGXXXXPXPXPRXXXGXXSPXL 538
PP P TP PPT P P G S L
Sbjct: 292 PPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPL 332
Score = 25.8 bits (54), Expect = 9.0
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +2
Query: 416 PPXXXGPPPXTPXXPPTXPXGXXXXPXPXPRXXXGXXSPXL 538
PP P TP PPT P P G S L
Sbjct: 346 PPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPL 386
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,511,187
Number of Sequences: 5004
Number of extensions: 21886
Number of successful extensions: 219
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 146
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 485316198
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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