Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_J14
(865 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48638-10|CAA88566.1| 118|Caenorhabditis elegans Hypothetical p... 57 2e-08
U28739-13|AAK68187.1| 418|Caenorhabditis elegans Dehydrogenases... 56 4e-08
U41544-2|AAA83184.1| 436|Caenorhabditis elegans Dehydrogenases,... 48 7e-06
D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA... 45 6e-05
AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical ... 45 6e-05
Z92838-5|CAB07404.2| 578|Caenorhabditis elegans Hypothetical pr... 37 0.021
Z22179-1|CAA80169.1| 254|Caenorhabditis elegans Hypothetical pr... 36 0.049
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 34 0.11
U42013-1|AAB06496.1| 415|Caenorhabditis elegans UNC-24 protein. 33 0.26
AF045644-5|AAC02604.1| 415|Caenorhabditis elegans Uncoordinated... 33 0.26
Z49130-1|CAA88965.2| 708|Caenorhabditis elegans Hypothetical pr... 30 1.9
U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical pr... 30 2.4
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 30 2.4
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 30 2.4
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 29 3.2
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 29 3.2
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 29 3.2
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 29 3.2
U80033-3|AAC48199.1| 1847|Caenorhabditis elegans Nuclear pore co... 29 5.7
>Z48638-10|CAA88566.1| 118|Caenorhabditis elegans Hypothetical
protein ZK892.2 protein.
Length = 118
Score = 56.8 bits (131), Expect = 2e-08
Identities = 32/105 (30%), Positives = 54/105 (51%)
Frame = +2
Query: 227 FKVFKYMKILEEAMQTDQDNLIEKVRGIYGFKVRNGPDGAEGYWVINAKEGKGKVTYNGS 406
FK + ++E + TD++ +++KV + + G DG W I+AK V + S
Sbjct: 3 FKSDVIFEEIKERIATDKE-MVKKVGTSFRMTIA-GADGKTKVWTIDAKSDTPYVGDDSS 60
Query: 407 EKPDVTFTISDEDVADLISGKLNPQXAFFQXKIKIQANMGLAMKL 541
++ I D D + +GK+ P AF Q K+K++ N+ AMKL
Sbjct: 61 RPVEIEINIKDSDFIAIAAGKMKPDQAFMQGKMKLKGNIAKAMKL 105
>U28739-13|AAK68187.1| 418|Caenorhabditis elegans Dehydrogenases,
short chain protein6 protein.
Length = 418
Score = 55.6 bits (128), Expect = 4e-08
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Frame = +2
Query: 248 KILEEAMQTDQDNLIEKVRGIYGFKVRNGPDGAEGYWVINAKEGKGKVT-YNGSEKPDVT 424
+I A + ++++K +Y F +++ +E ++ K G+G +T S K DV
Sbjct: 308 QIFTSAKRLLNADIVKKTGFVYEFLLKDPTTKSERIITLDLKNGEGALTDKKASGKADVK 367
Query: 425 FTISDEDVADLISGKLNPQXAFFQXKIKIQANMGLAMKLTDLQRQ 559
FT++ E A L +GKL P A K++I +M AMKL L R+
Sbjct: 368 FTLAPEHFAPLFTGKLRPTTALMTKKLQISGDMPGAMKLESLLRK 412
>U41544-2|AAA83184.1| 436|Caenorhabditis elegans Dehydrogenases,
short chain protein28 protein.
Length = 436
Score = 48.4 bits (110), Expect = 7e-06
Identities = 23/55 (41%), Positives = 34/55 (61%)
Frame = +2
Query: 398 NGSEKPDVTFTISDEDVADLISGKLNPQXAFFQXKIKIQANMGLAMKLTDLQRQA 562
NG EK + T T++D D D+ +GKLN Q AF K+K++ N+ L KL + +A
Sbjct: 378 NG-EKANATVTVADSDFVDIAAGKLNAQKAFMSGKLKVKGNVMLLQKLQTVLEKA 431
>D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA
thiolase protein.
Length = 412
Score = 45.2 bits (102), Expect = 6e-05
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = +2
Query: 89 REVPRARIALQHNLGLGGAVVITMYRKGFSNVTPNNV 199
R+VP ++A+QHN+G+GGA V+ +YR GF + +
Sbjct: 376 RQVPNCKVAMQHNIGIGGAGVVGLYRLGFPGAAQSKI 412
>AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical
protein Y57A10C.6 protein.
Length = 412
Score = 45.2 bits (102), Expect = 6e-05
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = +2
Query: 89 REVPRARIALQHNLGLGGAVVITMYRKGFSNVTPNNV 199
R+VP ++A+QHN+G+GGA V+ +YR GF + +
Sbjct: 376 RQVPNCKVAMQHNIGIGGAGVVGLYRLGFPGAAQSKI 412
>Z92838-5|CAB07404.2| 578|Caenorhabditis elegans Hypothetical
protein T03D8.6 protein.
Length = 578
Score = 36.7 bits (81), Expect = 0.021
Identities = 19/62 (30%), Positives = 27/62 (43%)
Frame = +2
Query: 311 YGFKVRNGPDGAEGYWVINAKEGKGKVTYNGSEKPDVTFTISDEDVADLISGKLNPQXAF 490
YGFK P GYW I K G GKVT+ +P V V+ ++ + +
Sbjct: 125 YGFKAAGTPGEIAGYWHIFKKFGSGKVTWKELVQPSVKLAREGHPVSPYLATVMKVKERH 184
Query: 491 FQ 496
F+
Sbjct: 185 FR 186
>Z22179-1|CAA80169.1| 254|Caenorhabditis elegans Hypothetical
protein F58A4.1 protein.
Length = 254
Score = 35.5 bits (78), Expect = 0.049
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Frame = +3
Query: 201 PPSPTTRKALRS--SNT*RSLKRPCKPTRT---T*SRKSAGSTVSRSETVQTAPRVTGSS 365
P SPTT S S T L +P + T T T S S ++ S S + T+ + S+
Sbjct: 60 PKSPTTTSISTSTVSTTPERLTKPYEETDTPIPTHSSPSTSTSTSTSTSTSTSTSRSTST 119
Query: 366 MRKKAKGKSPTTALKNPT*PSRSATKTWPILYP 464
+ + + TTA PT S++ T + I P
Sbjct: 120 VTPTTRSSTTTTATSTPTSSSKATTTSAQITQP 152
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 34.3 bits (75), Expect = 0.11
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +3
Query: 201 PPSPTTRKALRSSNT*RSLKR--PCKPTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMRK 374
P +PTT K+ ++ T + + P PT T + KS +T + T+++ P +
Sbjct: 224 PTTPTTMKSTPTTPTTPTTMKSTPTTPTTPT-TMKSTPTTPTTPTTMKSTPTTPTTPTTM 282
Query: 375 KAKGKSPTTALKNPT*PSRSAT 440
K+ +PTT PT P+ T
Sbjct: 283 KSTPTTPTTMKSTPTTPTTPTT 304
Score = 34.3 bits (75), Expect = 0.11
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +3
Query: 201 PPSPTTRKALRSSNT*RSLKR--PCKPTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMRK 374
P +PTT K+ ++ T + + P PT T + KS +T + T+++ P +
Sbjct: 338 PTTPTTMKSTPTTPTTPTTMKSTPTTPTTPT-TMKSTPTTPTTPTTMKSTPTTPTTPTTM 396
Query: 375 KAKGKSPTTALKNPT*PSRSAT 440
K+ +PTT PT P+ T
Sbjct: 397 KSTPTTPTTMKSTPTTPTTPTT 418
Score = 33.1 bits (72), Expect = 0.26
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +3
Query: 201 PPSPTTRKALRSSNT*RSLKRPCKPTRTT*SRKSA-GSTVSRSETVQTAPRVTGSSMRKK 377
P +PTT ++S+ T + K T TT + + ST + T+++ P + K
Sbjct: 361 PTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMKSTPTTPTTPTTMK 420
Query: 378 AKGKSPTTALKNPT*PS 428
+ +PTT PT PS
Sbjct: 421 STPTTPTTMKSTPTTPS 437
Score = 31.5 bits (68), Expect = 0.80
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Frame = +3
Query: 201 PPSPTTRKALRSSNT*RSLKR--PCKPTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMRK 374
P +PTT K+ ++ T + + P PT T + KS +T + T+++ P +
Sbjct: 237 PTTPTTMKSTPTTPTTPTTMKSTPTTPTTPT-TMKSTPTTPTTPTTMKSTPTTPTTMKST 295
Query: 375 KAKGKSPTTALKNPT*PSRSAT 440
+PTT PT P+ T
Sbjct: 296 PTTPTTPTTMKSTPTTPTTPTT 317
Score = 31.5 bits (68), Expect = 0.80
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Frame = +3
Query: 201 PPSPTTRKALRSSNT*RSLKR--PCKPTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMRK 374
P +PTT K+ ++ T + + P PT T + KS +T + T+++ P +
Sbjct: 351 PTTPTTMKSTPTTPTTPTTMKSTPTTPTTPT-TMKSTPTTPTTPTTMKSTPTTPTTMKST 409
Query: 375 KAKGKSPTTALKNPT*P-SRSATKTWP 452
+PTT PT P + +T T P
Sbjct: 410 PTTPTTPTTMKSTPTTPTTMKSTPTTP 436
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +3
Query: 201 PPSPTTRKALRSSNT*RSLKR--PCKPTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMRK 374
P +PTT K+ ++ T + + P PT T + KS +T + ++ T P +
Sbjct: 250 PTTPTTMKSTPTTPTTPTTMKSTPTTPTTPT-TMKSTPTTPTTMKSTPTTPTTPTTMKST 308
Query: 375 KAKGKSPTTALKNPT*PSRSAT 440
+PTT PT P+ T
Sbjct: 309 PTTPTTPTTMKSTPTTPTTPTT 330
>U42013-1|AAB06496.1| 415|Caenorhabditis elegans UNC-24 protein.
Length = 415
Score = 33.1 bits (72), Expect = 0.26
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +2
Query: 362 INAKEGKGKVTYNGSEKPDVTFTISDEDVADLISGKLNPQXAFFQXKIKIQANMGLAMKL 541
I+ K G G S PDV F S E +++ +++P + +K++ ++ AM+L
Sbjct: 345 IDLKHGSGSAYKGTSLNPDVVFETSLEVFGKILTKEVSPVTVYMNGNLKVKGSIQDAMQL 404
Query: 542 TDL 550
L
Sbjct: 405 KHL 407
>AF045644-5|AAC02604.1| 415|Caenorhabditis elegans Uncoordinated
protein 24 protein.
Length = 415
Score = 33.1 bits (72), Expect = 0.26
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +2
Query: 362 INAKEGKGKVTYNGSEKPDVTFTISDEDVADLISGKLNPQXAFFQXKIKIQANMGLAMKL 541
I+ K G G S PDV F S E +++ +++P + +K++ ++ AM+L
Sbjct: 345 IDLKHGSGSAYKGTSLNPDVVFETSLEVFGKILTKEVSPVTVYMNGNLKVKGSIQDAMQL 404
Query: 542 TDL 550
L
Sbjct: 405 KHL 407
>Z49130-1|CAA88965.2| 708|Caenorhabditis elegans Hypothetical
protein T06D8.2 protein.
Length = 708
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +3
Query: 174 SQT*RRTMWPPSPTTRKALRSSNT*RSLKRPCKPT--RTT*SRKSAGSTVSRSETVQTAP 347
S + RRT+ P P T ++ + + + + P +PT + SRK S V R ++
Sbjct: 325 SSSSRRTVTPKRPQTNDSVSTRRSSTTWEVPIRPTTMNSQISRKRTPSPVVRKAPSSSSS 384
Query: 348 RVTGSSMRKKA 380
T SS R+++
Sbjct: 385 NSTSSSSRRRS 395
>U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical
protein T09B4.5a protein.
Length = 327
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +3
Query: 204 PSPTTRKALRSSNT*RSLKRPCKPTRTT*SRKSAGSTVSRS-ETVQTAPRVTGSSMRKKA 380
P+ + RKA +S R+ P+R+ + G T S++ +T P + R ++
Sbjct: 34 PAKSARKASKSPARARTSNVKKTPSRSASKSATRGRTASKTPKTPSKTPSSASARSRSRS 93
Query: 381 KGKSPTTALKNPT*PSRSAT 440
+G+ + + + PS S+T
Sbjct: 94 RGRPTNASRLSASTPSASST 113
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 29.9 bits (64), Expect = 2.4
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
Frame = +3
Query: 192 TMWPPSPTTRKALRSSNT*RSLKRPCKPTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMR 371
T P + TT + ++T + KPT +T + S +T + S T T P+ T ++
Sbjct: 594 TQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTATTTPQPTTTTTS 653
Query: 372 KKAKGKSPTTALKNPT*P-SRSATKTWPILYP 464
+K + T PT R+ +T P P
Sbjct: 654 EKPVTLTTQTWTAPPTTTVKRTTPQTVPTTTP 685
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 29.9 bits (64), Expect = 2.4
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
Frame = +3
Query: 192 TMWPPSPTTRKALRSSNT*RSLKRPCKPTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMR 371
T P + TT + ++T + KPT +T + S +T + S T T P+ T ++
Sbjct: 594 TQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTATTTPQPTTTTTS 653
Query: 372 KKAKGKSPTTALKNPT*P-SRSATKTWPILYP 464
+K + T PT R+ +T P P
Sbjct: 654 EKPVTLTTQTWTAPPTTTVKRTTPQTVPTTTP 685
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 29.5 bits (63), Expect = 3.2
Identities = 21/75 (28%), Positives = 34/75 (45%)
Frame = +3
Query: 201 PPSPTTRKALRSSNT*RSLKRPCKPTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMRKKA 380
P SPT ++ S +K P K KS S + ++ + + TG +++K+
Sbjct: 1412 PASPTKKE---KSPAAEEVKSPTK------KEKSPSSPTKKEKSPSSPTKKTGDEVKEKS 1462
Query: 381 KGKSPTTALKNPT*P 425
KSPT K+P P
Sbjct: 1463 PPKSPTKKEKSPEKP 1477
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 29.5 bits (63), Expect = 3.2
Identities = 21/75 (28%), Positives = 34/75 (45%)
Frame = +3
Query: 201 PPSPTTRKALRSSNT*RSLKRPCKPTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMRKKA 380
P SPT ++ S +K P K KS S + ++ + + TG +++K+
Sbjct: 1412 PASPTKKE---KSPAAEEVKSPTK------KEKSPSSPTKKEKSPSSPTKKTGDEVKEKS 1462
Query: 381 KGKSPTTALKNPT*P 425
KSPT K+P P
Sbjct: 1463 PPKSPTKKEKSPEKP 1477
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 29.5 bits (63), Expect = 3.2
Identities = 21/75 (28%), Positives = 34/75 (45%)
Frame = +3
Query: 201 PPSPTTRKALRSSNT*RSLKRPCKPTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMRKKA 380
P SPT ++ S +K P K KS S + ++ + + TG +++K+
Sbjct: 1412 PASPTKKE---KSPAAEEVKSPTK------KEKSPSSPTKKEKSPSSPTKKTGDEVKEKS 1462
Query: 381 KGKSPTTALKNPT*P 425
KSPT K+P P
Sbjct: 1463 PPKSPTKKEKSPEKP 1477
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 29.5 bits (63), Expect = 3.2
Identities = 21/75 (28%), Positives = 34/75 (45%)
Frame = +3
Query: 201 PPSPTTRKALRSSNT*RSLKRPCKPTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMRKKA 380
P SPT ++ S +K P K KS S + ++ + + TG +++K+
Sbjct: 1412 PASPTKKE---KSPAAEEVKSPTK------KEKSPSSPTKKEKSPSSPTKKTGDEVKEKS 1462
Query: 381 KGKSPTTALKNPT*P 425
KSPT K+P P
Sbjct: 1463 PPKSPTKKEKSPEKP 1477
>U80033-3|AAC48199.1| 1847|Caenorhabditis elegans Nuclear pore complex
protein protein12 protein.
Length = 1847
Score = 28.7 bits (61), Expect = 5.7
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Frame = +2
Query: 344 AEGYWVINAKEGKGKVTYNGSEKPDVTFTISDEDVADLISGKLNPQ---XAFFQXKIKIQ 514
A+G+ + N KEG +T PD + V+ + S ++P + F+ I
Sbjct: 1249 ADGHLITNGKEGSAAITVRNVNSPDNETVLIPVTVSRVASLDVHPTIELKSAFENSPLIH 1308
Query: 515 ANMGLAMKLTDLQRQAAG 568
+G ++L + R A G
Sbjct: 1309 LPVGAQIQLNVVPRDARG 1326
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,843,011
Number of Sequences: 27780
Number of extensions: 279554
Number of successful extensions: 883
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 879
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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