Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_J12
(888 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 33 0.36
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 31 1.1
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 31 1.5
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 3.4
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 3.4
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 29 3.4
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 3.4
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical pr... 28 7.8
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 28 7.8
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 32.7 bits (71), Expect = 0.36
Identities = 24/79 (30%), Positives = 24/79 (30%)
Frame = -3
Query: 841 GXXGXRRGGGXXPRGVXXGGXWXXFKGGXGWGSXERXXKGXLXGGEXLGXFXXXXGFXHP 662
G G RGGG G GG W GG WG G G G G
Sbjct: 51 GGPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGG 110
Query: 661 XT*AGXXGDXRXGGXXPXG 605
G G R GG G
Sbjct: 111 RGGGGGGGGGRGGGGGGRG 129
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/82 (26%), Positives = 27/82 (32%), Gaps = 7/82 (8%)
Frame = +2
Query: 653 SSXRVAETPXXXKXSQXLXPXQXPLXXPLPAXPTLXAFKXXPXS-------PXPXXPXXA 811
S R A TP + Q P P P PT+ + P S P P P +
Sbjct: 746 SLPRSASTPQPIQQQQSSIPPPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISS 805
Query: 812 APXPPXPXXPXYGXLPXGGKXP 877
PP P P G + P
Sbjct: 806 GAPPPPPPPPPGGLMHVAASAP 827
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/82 (26%), Positives = 27/82 (32%), Gaps = 7/82 (8%)
Frame = +2
Query: 653 SSXRVAETPXXXKXSQXLXPXQXPLXXPLPAXPTLXAFKXXPXS-------PXPXXPXXA 811
S R A TP + Q P P P PT+ + P S P P P +
Sbjct: 746 SLPRSASTPQPIQQQQSSIPPPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISS 805
Query: 812 APXPPXPXXPXYGXLPXGGKXP 877
PP P P G + P
Sbjct: 806 GAPPPPPPPPPGGLMHVAASAP 827
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/90 (23%), Positives = 29/90 (32%), Gaps = 3/90 (3%)
Frame = +2
Query: 617 PAPXPXIPXXPRSSXRVAETPXXXKXSQXLX-PXQXPLXXPLPAXPTLXAFKXXPXSPXP 793
PAP P + P+++ V P + P P P A P ++ P P P
Sbjct: 78 PAPAPPLASYPQNAVPVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPP 137
Query: 794 --XXPXXAAPXPPXPXXPXYGXLPXGGKXP 877
P PP P P + P
Sbjct: 138 PPHYPPPPPHYPPPPPAPHSAYIDHSAPRP 167
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 3.4
Identities = 22/86 (25%), Positives = 26/86 (30%)
Frame = +2
Query: 629 PXIPXXPRSSXRVAETPXXXKXSQXLXPXQXPLXXPLPAXPTLXAFKXXPXSPXPXXPXX 808
P IP P + ++ S L P P P P + P P P
Sbjct: 681 PKIPLPPPTKMNLSAPSTSAGGSSALPPITGGPPPP-PGLPPITGGPPPPPPPGGLPPIT 739
Query: 809 AAPXPPXPXXPXYGXLPXGGKXPXXP 886
P PP P G P G P P
Sbjct: 740 GGPPPPPPPG---GLPPISGGPPPPP 762
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 3.4
Identities = 22/86 (25%), Positives = 26/86 (30%)
Frame = +2
Query: 629 PXIPXXPRSSXRVAETPXXXKXSQXLXPXQXPLXXPLPAXPTLXAFKXXPXSPXPXXPXX 808
P IP P + ++ S L P P P P + P P P
Sbjct: 681 PKIPLPPPTKMNLSAPSTSAGGSSALPPITGGPPPP-PGLPPITGGPPPPPPPGGLPPIT 739
Query: 809 AAPXPPXPXXPXYGXLPXGGKXPXXP 886
P PP P G P G P P
Sbjct: 740 GGPPPPPPPG---GLPPISGGPPPPP 762
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = -3
Query: 823 RGGGXXPRGVXXGGXWXXFKGGXGW--GSXERXXKGXLXGG 707
RGGG RG GG F+GG G G R +G GG
Sbjct: 7 RGGGGGFRGGRGGGGGGGFRGGRGGDRGGGFRGGRGGFGGG 47
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 3.4
Identities = 22/86 (25%), Positives = 26/86 (30%)
Frame = +2
Query: 629 PXIPXXPRSSXRVAETPXXXKXSQXLXPXQXPLXXPLPAXPTLXAFKXXPXSPXPXXPXX 808
P IP P + ++ S L P P P P + P P P
Sbjct: 264 PKIPLPPPTKMNLSAPSTSAGGSSALPPITGGPPPP-PGLPPITGGPPPPPPPGGLPPIT 322
Query: 809 AAPXPPXPXXPXYGXLPXGGKXPXXP 886
P PP P G P G P P
Sbjct: 323 GGPPPPPPPG---GLPPISGGPPPPP 345
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/57 (31%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Frame = +2
Query: 710 PXQXPLXXPLPAXPTLXAFKXXPXSPXPXXPXXAAPXPPXPXXPXYGXL-PXGGKXP 877
P P+ +P P + P P P AP PP P P L GGK P
Sbjct: 95 PPPPPMMGGIPPPPPMFG---APPPPPPPSGLGVAPQPPRPKTPVNPALAKLGGKNP 148
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 28.3 bits (60), Expect = 7.8
Identities = 23/79 (29%), Positives = 26/79 (32%)
Frame = +2
Query: 629 PXIPXXPRSSXRVAETPXXXKXSQXLXPXQXPLXXPLPAXPTLXAFKXXPXSPXPXXPXX 808
P P P ++ + A P K P P P P P A P P
Sbjct: 127 PGAPGAPGAAGKGASAPCEAKTPPPCQPC--PAGPPGPPGPDGPA---GPAGPDGEAGSP 181
Query: 809 AAPXPPXPXXPXYGXLPXG 865
AAP PP P P P G
Sbjct: 182 AAPSPPGPPGPPGPAGPAG 200
>Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical
protein T01C3.7 protein.
Length = 352
Score = 28.3 bits (60), Expect = 7.8
Identities = 26/84 (30%), Positives = 28/84 (33%), Gaps = 5/84 (5%)
Frame = -3
Query: 841 GXXGXRRGG-----GXXPRGVXXGGXWXXFKGGXGWGSXERXXKGXLXGGEXLGXFXXXX 677
G G GG G RG GG F+GG G G +G GG G
Sbjct: 25 GSRGGFGGGGRGGYGGGDRGSFGGGDRGGFRGGRGGGD-----RGGFRGGRGGGDRGGFG 79
Query: 676 GFXHPXT*AGXXGDXRXGGXXPXG 605
G P G G R G P G
Sbjct: 80 GRGSPRGGFGGRGSPRGGRGSPRG 103
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Frame = -3
Query: 841 GXXGXRRGGGXXPRGVXXGGXWXXFKGGXG-WG 746
G G GGG G GG W GG G WG
Sbjct: 47 GGWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWG 79
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,706,202
Number of Sequences: 27780
Number of extensions: 148119
Number of successful extensions: 533
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 451
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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